Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1300
(678 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 161 3e-40
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 161 3e-40
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 161 4e-40
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 161 4e-40
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 161 4e-40
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 161 4e-40
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 157 8e-39
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 157 8e-39
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 157 8e-39
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 151 3e-37
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 102 3e-22
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 85 4e-17
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 79 3e-15
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 65 5e-11
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 60 1e-09
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 52 5e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 44 9e-05
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 41 7e-04
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 36 0.019
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.099
At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family... 30 1.6
At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family... 30 1.6
At1g51090.1 68414.m05744 heavy-metal-associated domain-containin... 30 1.6
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 29 2.1
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 2.1
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 29 2.1
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 29 2.1
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 29 2.8
At3g12650.1 68416.m01575 expressed protein 29 2.8
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 29 3.7
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 4.9
At2g48080.1 68415.m06018 oxidoreductase, 2OG-Fe(II) oxygenase fa... 28 4.9
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 28 4.9
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 28 6.5
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 28 6.5
At3g28790.1 68416.m03593 expressed protein 28 6.5
At3g28345.1 68416.m03541 ABC transporter family protein similar ... 28 6.5
At3g05750.1 68416.m00646 expressed protein 28 6.5
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 6.5
At1g70080.1 68414.m08063 terpene synthase/cyclase family protein... 28 6.5
At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PG... 27 8.6
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 27 8.6
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 161 bits (392), Expect = 3e-40
Identities = 73/83 (87%), Positives = 78/83 (93%)
Frame = +2
Query: 5 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 184
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 185 GILTLKYPIEHGIVTNWDDMEKI 253
GILTLKYPIEHGIV+NWDDMEKI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKI 87
Score = 99.5 bits (237), Expect = 2e-21
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 648
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 91 TFYNELRVAPEEHPVLLTEAPLNPKANR 118
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETFN PAMYVA
Sbjct: 118 REKMTQIMFETFNVPAMYVA 137
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 161 bits (392), Expect = 3e-40
Identities = 73/83 (87%), Positives = 78/83 (93%)
Frame = +2
Query: 5 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 184
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 185 GILTLKYPIEHGIVTNWDDMEKI 253
GILTLKYPIEHGIV+NWDDMEKI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKI 87
Score = 102 bits (244), Expect = 3e-22
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 190
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 91 TFYNELRVAPEEHPVLLTEAPLNPKANR 118
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETFNTPAMYVA
Sbjct: 118 REKMTQIMFETFNTPAMYVA 137
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 161 bits (391), Expect = 4e-40
Identities = 73/83 (87%), Positives = 77/83 (92%)
Frame = +2
Query: 5 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 184
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 185 GILTLKYPIEHGIVTNWDDMEKI 253
GILTLKYPIEHGIV NWDDMEKI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKI 87
Score = 100 bits (239), Expect = 1e-21
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDH 190
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 91 TFYNELRVAPEEHPVLLTEAPLNPKANR 118
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETFNTPAMYVA
Sbjct: 118 REKMTQIMFETFNTPAMYVA 137
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 161 bits (391), Expect = 4e-40
Identities = 73/83 (87%), Positives = 77/83 (92%)
Frame = +2
Query: 5 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 184
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 185 GILTLKYPIEHGIVTNWDDMEKI 253
GILTLKYPIEHGIV NWDDMEKI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKI 87
Score = 99.5 bits (237), Expect = 2e-21
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 648
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
Score = 63.3 bits (147), Expect = 1e-10
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELRVAPEEHP+LLTEAPLNPKANR
Sbjct: 91 TFYNELRVAPEEHPILLTEAPLNPKANR 118
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETFN PAMYVA
Sbjct: 118 REKMTQIMFETFNAPAMYVA 137
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 161 bits (391), Expect = 4e-40
Identities = 73/83 (87%), Positives = 77/83 (92%)
Frame = +2
Query: 5 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 184
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 185 GILTLKYPIEHGIVTNWDDMEKI 253
GILTLKYPIEHGIV NWDDMEKI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKI 87
Score = 100 bits (239), Expect = 1e-21
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDH 190
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 91 TFYNELRVAPEEHPVLLTEAPLNPKANR 118
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETFNTPAMYVA
Sbjct: 118 REKMTQIMFETFNTPAMYVA 137
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 161 bits (391), Expect = 4e-40
Identities = 73/83 (87%), Positives = 77/83 (92%)
Frame = +2
Query: 5 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 184
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 185 GILTLKYPIEHGIVTNWDDMEKI 253
GILTLKYPIEHGIV NWDDMEKI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKI 87
Score = 99.5 bits (237), Expect = 2e-21
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 648
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
Score = 63.3 bits (147), Expect = 1e-10
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELRVAPEEHP+LLTEAPLNPKANR
Sbjct: 91 TFYNELRVAPEEHPILLTEAPLNPKANR 118
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETFN PAMYVA
Sbjct: 118 REKMTQIMFETFNAPAMYVA 137
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 157 bits (380), Expect = 8e-39
Identities = 68/83 (81%), Positives = 77/83 (92%)
Frame = +2
Query: 5 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 184
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 185 GILTLKYPIEHGIVTNWDDMEKI 253
GILTLKYPIEHG+V+NWDDMEKI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKI 87
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDY
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDY 190
Score = 63.3 bits (147), Expect = 1e-10
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELR+APEEHPVLLTEAPLNPKANR
Sbjct: 91 TFYNELRIAPEEHPVLLTEAPLNPKANR 118
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETFN+PAMYVA
Sbjct: 118 REKMTQIMFETFNSPAMYVA 137
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 157 bits (380), Expect = 8e-39
Identities = 68/83 (81%), Positives = 77/83 (92%)
Frame = +2
Query: 5 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 184
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 185 GILTLKYPIEHGIVTNWDDMEKI 253
GILTLKYPIEHG+V+NWDDMEKI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKI 87
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDY
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDY 190
Score = 63.3 bits (147), Expect = 1e-10
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELR+APEEHPVLLTEAPLNPKANR
Sbjct: 91 TFYNELRIAPEEHPVLLTEAPLNPKANR 118
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETFN+PAMYVA
Sbjct: 118 REKMTQIMFETFNSPAMYVA 137
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 157 bits (380), Expect = 8e-39
Identities = 68/83 (81%), Positives = 77/83 (92%)
Frame = +2
Query: 5 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 184
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 185 GILTLKYPIEHGIVTNWDDMEKI 253
GILTLKYPIEHG+V+NWDDMEKI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKI 87
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDY
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDY 190
Score = 63.3 bits (147), Expect = 1e-10
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELR+APEEHPVLLTEAPLNPKANR
Sbjct: 91 TFYNELRIAPEEHPVLLTEAPLNPKANR 118
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETFN+PAMYVA
Sbjct: 118 REKMTQIMFETFNSPAMYVA 137
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 151 bits (367), Expect = 3e-37
Identities = 65/83 (78%), Positives = 78/83 (93%)
Frame = +2
Query: 5 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 184
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 185 GILTLKYPIEHGIVTNWDDMEKI 253
GIL+LKYPIEHG+V+NWDDMEKI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKI 88
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LY+SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+Y
Sbjct: 145 LYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEY 191
Score = 58.4 bits (135), Expect = 4e-09
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELR+ PEEHP+LLTEAPLNPK NR
Sbjct: 92 TFYNELRLEPEEHPILLTEAPLNPKVNR 119
Score = 34.7 bits (76), Expect = 0.057
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYV 491
REKMTQIMFE+F P+MY+
Sbjct: 119 REKMTQIMFESFAFPSMYI 137
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 102 bits (244), Expect = 3e-22
Identities = 47/78 (60%), Positives = 57/78 (73%)
Frame = +2
Query: 20 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 199
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 200 KYPIEHGIVTNWDDMEKI 253
K P+EHGIV NWDDMEKI
Sbjct: 59 KDPMEHGIVNNWDDMEKI 76
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/50 (80%), Positives = 44/50 (88%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYPYE 660
LY+SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTDY E
Sbjct: 133 LYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIE 182
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/28 (92%), Positives = 26/28 (92%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELRV PEEHPVLLTEAP NPKANR
Sbjct: 80 TFYNELRVDPEEHPVLLTEAPYNPKANR 107
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFE+F+ PAMYV+
Sbjct: 107 REKMTQIMFESFDVPAMYVS 126
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 85.0 bits (201), Expect = 4e-17
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
L+ASGRTTG VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR LT+Y
Sbjct: 99 LHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNY 145
Score = 71.3 bits (167), Expect = 5e-13
Identities = 28/42 (66%), Positives = 37/42 (88%)
Frame = +2
Query: 128 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 253
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKI
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKI 42
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFY+ELRVAPEEHPVLLTEAPLNPKA+R
Sbjct: 46 TFYSELRVAPEEHPVLLTEAPLNPKADR 73
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYV 491
REKMTQIMFETF P+MY+
Sbjct: 73 REKMTQIMFETFAVPSMYI 91
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 79.0 bits (186), Expect = 3e-15
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +2
Query: 20 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 193
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 194 TLKYPIEHGIVTNWDDMEKI 253
+ YP+ +GIV NWDDME +
Sbjct: 67 DINYPVHNGIVQNWDDMEHV 86
Score = 65.7 bits (153), Expect = 3e-11
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYA G TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR +T Y
Sbjct: 143 LYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAY 189
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 265 FYNELRVAPEEHPVLLTEAPLNPKANR 345
FYNEL++ P + +LLT+ PLNP NR
Sbjct: 91 FYNELKINPSDCKILLTDPPLNPSKNR 117
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 64.9 bits (151), Expect = 5e-11
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 16/99 (16%)
Frame = +2
Query: 5 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 139
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 140 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKI 253
G++ Y G +A + +R + + P + GIVT+WD ++ +
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNV 103
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 265 FYNELRVAPEEHPVLLTEAPLNPKANR 345
F N L + P EHP+LL E PLN + R
Sbjct: 108 FRNCLMIDPTEHPMLLAEPPLNSQQQR 134
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 60.1 bits (139), Expect = 1e-09
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 22/105 (20%)
Frame = +2
Query: 5 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 154
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 155 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKI 253
YVG +A S +R + + PI+ GIV++WD ++ I
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNI 109
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 514 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 648
+A+GR T +V+D G G + P+++GY L A++ L G LTD
Sbjct: 167 FATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTD 211
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 265 FYNELRVAPEEHPVLLTEAPLNPKANR 345
F + L + P EHP+LL E PLN + R
Sbjct: 114 FKSCLMIDPTEHPMLLAEPPLNTQQQR 140
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVASKP 503
REK ++MFE + PA+++A P
Sbjct: 140 REKAAELMFEKYKVPALFMAKNP 162
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 51.6 bits (118), Expect = 5e-07
Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 21/99 (21%)
Frame = +2
Query: 17 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 142
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 143 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEK 250
D Y+GDEA +K R T L YPIEHG V +WD ME+
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMER 103
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +1
Query: 532 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 645
TG+V+D GDG +H VP+ EGY + I + +AG+D+T
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVT 210
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 268 YNELRVAPEEHPVLLTEAPLNPKANR 345
+N LR PE+H LLTE+PL P +R
Sbjct: 110 FNYLRCDPEDHYFLLTESPLTPPESR 135
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
RE +I+FETFN P +Y+A
Sbjct: 135 REYTGEILFETFNVPGLYIA 154
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2
Query: 20 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 166
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
L+ + GIVL G +H++P +G + R ++ G +TDY
Sbjct: 163 LHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDY 209
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 499 SRAPLYASGRTT-GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
SR P +T +V+D G +H VP+ + L HAI R+DL G+ T+Y
Sbjct: 141 SRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNY 192
Score = 36.3 bits (80), Expect = 0.019
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 20 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 199
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 200 KYPIEHGIVTNWDDMEKI-CIIPSTMSCVSPPRNT---QSCSLRLPSTPRPTGE--FIDA 361
+ PI+ G + N D +I + +++ ++P ++ L +PS R T E F D
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 362 GLCTL 376
G +L
Sbjct: 122 GFSSL 126
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 36.3 bits (80), Expect = 0.019
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 17 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 193
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 194 TLKYPIEHGIVTNWDDMEKI 253
TL PIE G++ +WD ME +
Sbjct: 54 TLD-PIERGLIRDWDAMEDL 72
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVASK 500
RE++ Q+MFETFN Y + +
Sbjct: 104 REQLVQLMFETFNVSGFYASEQ 125
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.099
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 141 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 4
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family
protein identical to hydroxyproline-rich glycoprotein
[Arabidopsis thaliana] gi|9293881|dbj|BAB01784
Length = 532
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 599 SAYPS*MGTVWETPSPESSTIPVVRPDAYSGARLGCDVHGG 477
+AYPS TV+ SP P + P +Y G+ +G + G
Sbjct: 461 AAYPSPPTTVYSNRSPPYPYSPEIIPGSYQGSPIGYPAYNG 501
>At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 340
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 260 IPSTMSCVSPPRNTQSCSLRLPSTPRP 340
IP+T+ PP QS SL LPS P+P
Sbjct: 187 IPTTIVLSLPPPPPQSLSLSLPSPPQP 213
>At1g51090.1 68414.m05744 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 171
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 515 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPFCVW 622
T P P PA V P P P + +P P +W
Sbjct: 92 TAPAPAPAQAQAPALVRPAPVPVLVSSSAPQPMPMW 127
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 521 PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 610
P PP S TP SP P P + SPTP
Sbjct: 230 PGPPPSSSPTPGPDSPLPSPGPPPSPSPTP 259
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +2
Query: 515 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 610
T PV PP TP+ SPTP T SP P
Sbjct: 148 TPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPP 179
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 515 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 610
T PV PP TP+ SPTP P + +PTP
Sbjct: 94 TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTP 124
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 515 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 610
T PV PP TP+ SPTP P + +PTP
Sbjct: 112 TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTP 142
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 515 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 610
T PV PP TP+ SPTP P + +PTP
Sbjct: 130 TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTP 160
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 530 PPVSCWTPATVSPTPCPSTKDTHSPTP 610
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 530 PPVSCWTPATVSPTPCPSTKDTHSPTP 610
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +2
Query: 515 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPFCVWT*PVXTSQTTLMKILT 670
T PVV P + P PTP P +PTP PV T T ++T
Sbjct: 171 TPPVVTPPTPTPPVITPPTPTPPVVTPPTPTP------PVITPPTPTPPVIT 216
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +2
Query: 515 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPFCVWT*PVXTSQTTLMKILT 670
T PVV P + P PTP P +PTP PV T T ++T
Sbjct: 191 TPPVVTPPTPTPPVITPPTPTPPVITPPTPTP------PVVTPPTPTPPVVT 236
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 515 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 610
T PV+ P + P PTP P +PTP
Sbjct: 211 TPPVITPPTPTPPVVTPPTPTPPVVTPPTPTP 242
>At3g12650.1 68416.m01575 expressed protein
Length = 238
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -1
Query: 330 VEGSLSEQDWVFLGGDTQLIVEGMMQ-IFSMSSQL 229
+EG E+D LG +T+ ++EGMM+ ++S+S +
Sbjct: 99 IEGPTVERDLSALGNETRQVLEGMMKNMYSLSGAM 133
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 524 VVPPVSCWTPATVSPTPCPSTKDT-HSPTPFC 616
+ PP+SC TP PCP + HS T C
Sbjct: 645 IPPPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -1
Query: 261 MMQIFSMSSQLVTIPCSMGYLRVRIPLLLCASS 163
+ IFS SS+LVT P S+ +R R ++L SS
Sbjct: 7 LSSIFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g48080.1 68415.m06018 oxidoreductase, 2OG-Fe(II) oxygenase
family protein contains Pfam domain PF03171 2OG-Fe(II)
oxygenase superfamily
Length = 438
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Frame = +2
Query: 425 VLFQREDDPDHVRNIQHARHVRRIQAVLRCTRP----VVPPVSCWTPATVSP----TPCP 580
+L R + D R++ +R+ +P V PP + W P T SP P P
Sbjct: 325 LLVMRGNSADMARHVMCPSPNKRVAITFFKLKPDSGKVQPPPTLWRPGTPSPLVMLAPAP 384
Query: 581 STKDTHSPTPFCVWT*PV 634
D + F WT PV
Sbjct: 385 KRLDAGTGV-FLPWTPPV 401
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 521 PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 610
P PP SC TP+ P+P P K + P+P
Sbjct: 53 PSPPPPSC-TPSPPPPSPPPPKKSSCPPSP 81
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 484 CTSHPSRAPLYASGRTTGIVLDSGDGVSHTVPIYEG 591
C + + LYA+ RT+GIV++ G V +PI G
Sbjct: 235 CAVNQAVLALYAARRTSGIVVNIGFQVITILPILHG 270
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 484 CTSHPSRAPLYASGRTTGIVLDSGDGVSHTVPIYEG 591
C + + LYA+ RT+GIV++ G V +PI G
Sbjct: 235 CAVNQAVLALYAARRTSGIVVNIGFQVITILPILHG 270
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 530 PPVSCWTPATVSP-TPCPSTKDTHSPTP 610
P S TP+T +P TP PST +PTP
Sbjct: 281 PTPSTPTPSTPTPSTPTPSTPTPSTPTP 308
>At3g28345.1 68416.m03541 ABC transporter family protein similar to
P-glycoprotein [Arabidopsis thaliana] GI:3849833;
contains Pfam profiles PF00005: ABC transporter, PF00664:
ABC transporter transmembrane region
Length = 1240
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 466 HSTRPPCTSHPSRAPLYASGRTTGIVLDSGDGVSHTVPIYEGYALP-HAILRLDLAGRDL 642
+ TRP + + G++T IV SG G S + + E + P I+++D GRD+
Sbjct: 1004 YPTRPDVIIFKNFSIKIEEGKSTAIVGPSGSGKSTIIGLIERFYDPLKGIVKID--GRDI 1061
Query: 643 TDY 651
Y
Sbjct: 1062 RSY 1064
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.9 bits (59), Expect = 6.5
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Frame = +2
Query: 5 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEAQSK 181
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 182 RG--ILTLKYPIEHGIVTNWDDMEK-ICIIPSTMSCVSPPRNTQSCS 313
+G ++ ++ G+ T DD +K + +I T S SP + S S
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKKDMDVISFTFS--SPIKGLSSDS 490
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 244 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 137
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At1g70080.1 68414.m08063 terpene synthase/cyclase family protein
similar to (+)-delta-cadinene synthase [Gossypium
hirsutum][GI:8389329], sesquiterpene synthases
[GI:11934937][Lycopersicon hirsutum],
[GI:11934933][Lycopersicon esculentum]; contains Pfam
profile: PF01397: Terpene synthase family
Length = 611
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 464 NIQHARHVRRIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPFCVW 622
N+ + H +++ L +R P C AT +PT ST + +P P +W
Sbjct: 24 NLSSSYHYPLLKSSLSFSRFQSPKKLCLVRATTNPTDDNSTTRSFTPHPPSLW 76
>At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PGP1)
identical to P-glycoprotein GI:3849833 from [Arabidopsis
thaliana]; homologous to mammalian mdr gene,contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1286
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 455 DLGHLLSETEQSHSLDNGR*GPTGRKAKCIVLHR*THLLALGLRGASVSR 306
D G + + SH L N P G A+ I L R TH +G+ S SR
Sbjct: 1234 DDGKVAEQGSHSHLLKNH---PDGIYARMIQLQRFTHTQVIGMTSGSSSR 1280
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 527 VPPVSCWTPATVSPTPCPSTKDTHSPT 607
+PPV+ TP+ ++ P P + T +PT
Sbjct: 38 LPPVTAETPSPIASPPVPVNEPTPAPT 64
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,369,395
Number of Sequences: 28952
Number of extensions: 428127
Number of successful extensions: 1585
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1567
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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