Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1299
(615 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 24 1.4
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 24 1.4
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 24 1.4
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 24 1.4
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 24 1.4
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 24 1.4
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 2.4
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 22 4.1
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 5.5
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 5.5
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 9.6
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 9.6
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.6
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 9.6
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 9.6
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 257 PPYXSNHRTEVITLHHYYYYKNERKIY 337
P Y ++ E + L+ YYYY E Y
Sbjct: 217 PEYKLDYFMEDVELNAYYYYMREMLPY 243
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 257 PPYXSNHRTEVITLHHYYYYKNERKIY 337
P Y ++ E + L+ YYYY E Y
Sbjct: 217 PEYKLDYFMEDVELNAYYYYMREMLPY 243
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.8 bits (49), Expect = 1.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 601 NSVAYNSGLNGYNNICVGIY 542
N+ YN N YNN C +Y
Sbjct: 94 NNYKYNYNNNNYNNNCKKLY 113
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.8 bits (49), Expect = 1.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 601 NSVAYNSGLNGYNNICVGIY 542
N+ YN N YNN C +Y
Sbjct: 94 NNYKYNYNNNNYNNNCKKLY 113
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.8 bits (49), Expect = 1.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 601 NSVAYNSGLNGYNNICVGIY 542
N+ YN N YNN C +Y
Sbjct: 94 NNYKYNYNNNNYNNNCKKLY 113
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.8 bits (49), Expect = 1.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 601 NSVAYNSGLNGYNNICVGIY 542
N+ YN N YNN C +Y
Sbjct: 94 NNYKYNYNNNNYNNNCKKLY 113
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 60 ICFQLKLKSKKLHV 101
+CF LK K+KKL V
Sbjct: 544 MCFSLKFKNKKLPV 557
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 194 FVLNSYAPDMISIKVYFLGIHAHTAI 117
+ L A M+ K+ F G+H+HT I
Sbjct: 238 YSLGIVAWQMLFRKLPFAGLHSHTII 263
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 257 PPYXSNHRTEVITLHHYYYYKN 322
P N+ TE + L+H+Y+ N
Sbjct: 215 PEQRLNYFTEDVGLNHFYFMLN 236
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 257 PPYXSNHRTEVITLHHYYYYKN 322
P N+ TE + L+H+Y+ N
Sbjct: 215 PEQRLNYFTEDVGLNHFYFMLN 236
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2
Query: 215 SLKTGKEFVLNSYAPD 168
+L G EF+ N + PD
Sbjct: 82 TLSVGSEFIKNIWVPD 97
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2
Query: 215 SLKTGKEFVLNSYAPD 168
+L G EF+ N + PD
Sbjct: 82 TLSVGSEFIKNIWVPD 97
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 613 DPARNSVAYNSGLNGYN 563
+P N+ YN+ N YN
Sbjct: 86 NPLSNNYNYNNNYNNYN 102
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 601 NSVAYNSGLNGYNN 560
N+ YN+ N YNN
Sbjct: 90 NNYNYNNNYNNYNN 103
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2
Query: 215 SLKTGKEFVLNSYAPD 168
+L G EF+ N + PD
Sbjct: 21 TLSVGSEFIKNIWVPD 36
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,134
Number of Sequences: 438
Number of extensions: 3768
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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