BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1299 (615 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 24 1.4 EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 24 1.4 DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 24 1.4 DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 24 1.4 DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 24 1.4 DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 24 1.4 AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 2.4 AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 22 4.1 EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 5.5 AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 5.5 DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 9.6 DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 9.6 DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.6 DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 9.6 AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 9.6 >EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. Length = 686 Score = 23.8 bits (49), Expect = 1.4 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = +2 Query: 257 PPYXSNHRTEVITLHHYYYYKNERKIY 337 P Y ++ E + L+ YYYY E Y Sbjct: 217 PEYKLDYFMEDVELNAYYYYMREMLPY 243 >EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. Length = 686 Score = 23.8 bits (49), Expect = 1.4 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = +2 Query: 257 PPYXSNHRTEVITLHHYYYYKNERKIY 337 P Y ++ E + L+ YYYY E Y Sbjct: 217 PEYKLDYFMEDVELNAYYYYMREMLPY 243 >DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex determiner protein. Length = 186 Score = 23.8 bits (49), Expect = 1.4 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = -3 Query: 601 NSVAYNSGLNGYNNICVGIY 542 N+ YN N YNN C +Y Sbjct: 94 NNYKYNYNNNNYNNNCKKLY 113 >DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 23.8 bits (49), Expect = 1.4 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = -3 Query: 601 NSVAYNSGLNGYNNICVGIY 542 N+ YN N YNN C +Y Sbjct: 94 NNYKYNYNNNNYNNNCKKLY 113 >DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 23.8 bits (49), Expect = 1.4 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = -3 Query: 601 NSVAYNSGLNGYNNICVGIY 542 N+ YN N YNN C +Y Sbjct: 94 NNYKYNYNNNNYNNNCKKLY 113 >DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 23.8 bits (49), Expect = 1.4 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = -3 Query: 601 NSVAYNSGLNGYNNICVGIY 542 N+ YN N YNN C +Y Sbjct: 94 NNYKYNYNNNNYNNNCKKLY 113 >AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A isoform protein. Length = 567 Score = 23.0 bits (47), Expect = 2.4 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = +3 Query: 60 ICFQLKLKSKKLHV 101 +CF LK K+KKL V Sbjct: 544 MCFSLKFKNKKLPV 557 >AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. Length = 316 Score = 22.2 bits (45), Expect = 4.1 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = -2 Query: 194 FVLNSYAPDMISIKVYFLGIHAHTAI 117 + L A M+ K+ F G+H+HT I Sbjct: 238 YSLGIVAWQMLFRKLPFAGLHSHTII 263 >EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. Length = 683 Score = 21.8 bits (44), Expect = 5.5 Identities = 8/22 (36%), Positives = 13/22 (59%) Frame = +2 Query: 257 PPYXSNHRTEVITLHHYYYYKN 322 P N+ TE + L+H+Y+ N Sbjct: 215 PEQRLNYFTEDVGLNHFYFMLN 236 >AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. Length = 683 Score = 21.8 bits (44), Expect = 5.5 Identities = 8/22 (36%), Positives = 13/22 (59%) Frame = +2 Query: 257 PPYXSNHRTEVITLHHYYYYKN 322 P N+ TE + L+H+Y+ N Sbjct: 215 PEQRLNYFTEDVGLNHFYFMLN 236 >DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride channel protein. Length = 445 Score = 21.0 bits (42), Expect = 9.6 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = -2 Query: 215 SLKTGKEFVLNSYAPD 168 +L G EF+ N + PD Sbjct: 82 TLSVGSEFIKNIWVPD 97 >DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride channel protein. Length = 445 Score = 21.0 bits (42), Expect = 9.6 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = -2 Query: 215 SLKTGKEFVLNSYAPD 168 +L G EF+ N + PD Sbjct: 82 TLSVGSEFIKNIWVPD 97 >DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 9.6 Identities = 7/17 (41%), Positives = 10/17 (58%) Frame = -3 Query: 613 DPARNSVAYNSGLNGYN 563 +P N+ YN+ N YN Sbjct: 86 NPLSNNYNYNNNYNNYN 102 >DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 21.0 bits (42), Expect = 9.6 Identities = 7/14 (50%), Positives = 9/14 (64%) Frame = -3 Query: 601 NSVAYNSGLNGYNN 560 N+ YN+ N YNN Sbjct: 90 NNYNYNNNYNNYNN 103 >AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl subunit protein. Length = 365 Score = 21.0 bits (42), Expect = 9.6 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = -2 Query: 215 SLKTGKEFVLNSYAPD 168 +L G EF+ N + PD Sbjct: 21 TLSVGSEFIKNIWVPD 36 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 171,134 Number of Sequences: 438 Number of extensions: 3768 Number of successful extensions: 15 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 15 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 18215697 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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