BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1298 (655 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 193 1e-49 SB_56| Best HMM Match : Actin (HMM E-Value=0) 193 1e-49 SB_56628| Best HMM Match : Actin (HMM E-Value=0) 193 1e-49 SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 192 2e-49 SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46 SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 1e-29 SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 2e-23 SB_54| Best HMM Match : Actin (HMM E-Value=0) 99 2e-21 SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 83 2e-16 SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 71 6e-13 SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09 SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 58 8e-09 SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 52 4e-07 SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05 SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 40 0.002 SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.067 SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62 SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62 SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.62 SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 1.1 SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4 SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4 SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.9 SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 29 2.5 SB_717| Best HMM Match : Glyco_hydro_63 (HMM E-Value=0.00015) 29 2.5 SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8 SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8 SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6 SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6 SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6 >SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 375 Score = 193 bits (470), Expect = 1e-49 Identities = 93/116 (80%), Positives = 96/116 (82%) Frame = +2 Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433 +RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120 Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601 QIMFETFN+PAMYVAIQAVLSLYAS + P GYALPHAIL Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL 176 Score = 125 bits (302), Expect = 3e-29 Identities = 57/60 (95%), Positives = 60/60 (100%) Frame = +3 Query: 78 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257 +++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 >SB_56| Best HMM Match : Actin (HMM E-Value=0) Length = 375 Score = 193 bits (470), Expect = 1e-49 Identities = 93/116 (80%), Positives = 96/116 (82%) Frame = +2 Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433 +RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120 Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601 QIMFETFN+PAMYVAIQAVLSLYAS + P GYALPHAIL Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL 176 Score = 126 bits (305), Expect = 1e-29 Identities = 58/60 (96%), Positives = 60/60 (100%) Frame = +3 Query: 78 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257 ++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 >SB_56628| Best HMM Match : Actin (HMM E-Value=0) Length = 376 Score = 193 bits (470), Expect = 1e-49 Identities = 93/116 (80%), Positives = 96/116 (82%) Frame = +2 Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433 +RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121 Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601 QIMFETFN+PAMYVAIQAVLSLYAS + P GYALPHAIL Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL 177 Score = 132 bits (320), Expect = 2e-31 Identities = 60/62 (96%), Positives = 62/62 (100%) Frame = +3 Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251 MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 252 SK 257 SK Sbjct: 61 SK 62 >SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 376 Score = 192 bits (468), Expect = 2e-49 Identities = 92/116 (79%), Positives = 96/116 (82%) Frame = +2 Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433 +RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121 Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601 QIMFETFN+PAMYVAIQAVLSLYAS + P GYALPHAI+ Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAII 177 Score = 128 bits (309), Expect = 4e-30 Identities = 59/62 (95%), Positives = 61/62 (98%) Frame = +3 Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251 M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 252 SK 257 SK Sbjct: 61 SK 62 >SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 349 Score = 183 bits (445), Expect = 1e-46 Identities = 83/85 (97%), Positives = 85/85 (100%) Frame = +2 Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433 +RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121 Query: 434 QIMFETFNTPAMYVAIQAVLSLYAS 508 QIMFETFN+PAMYVAIQAVLSLYAS Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146 Score = 128 bits (309), Expect = 4e-30 Identities = 57/62 (91%), Positives = 61/62 (98%) Frame = +3 Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251 M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 252 SK 257 SK Sbjct: 61 SK 62 Score = 44.8 bits (101), Expect = 6e-05 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = +1 Query: 511 RTTGIVLDSGDGVFHTVPIYE 573 RTTGIV+DSGDGV HTVPIYE Sbjct: 148 RTTGIVMDSGDGVSHTVPIYE 168 >SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 338 Score = 126 bits (305), Expect = 1e-29 Identities = 57/60 (95%), Positives = 60/60 (100%) Frame = +3 Query: 78 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257 D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Score = 62.5 bits (145), Expect = 3e-10 Identities = 34/62 (54%), Positives = 39/62 (62%) Frame = +2 Query: 416 NREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHA 595 N + M +IMFETFN+PAMYVAIQAVLSLYAS + P GYALPHA Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137 Query: 596 IL 601 I+ Sbjct: 138 II 139 Score = 60.9 bits (141), Expect = 9e-10 Identities = 26/30 (86%), Positives = 27/30 (90%) Frame = +2 Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTF 343 +RGILTLKYPIEHGIVTNWDDMEKI TF Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90 >SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 411 Score = 105 bits (253), Expect = 2e-23 Identities = 50/116 (43%), Positives = 73/116 (62%), Gaps = 1/116 (0%) Frame = +2 Query: 248 TEQRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 424 ++ R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NRE Sbjct: 62 SQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNRE 121 Query: 425 KMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPH 592 KM ++MFE + +Y+AIQAVL+LYA + + CP G+ALPH Sbjct: 122 KMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPH 177 Score = 50.0 bits (114), Expect = 2e-06 Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%) Frame = +3 Query: 90 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 248 + +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61 >SB_54| Best HMM Match : Actin (HMM E-Value=0) Length = 2486 Score = 99 bits (238), Expect = 2e-21 Identities = 50/91 (54%), Positives = 62/91 (68%) Frame = +2 Query: 323 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 502 K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188 Query: 503 ASVVPPVSCWTPATVSSTPCPSTRGYALPHA 595 AS + + S P GY LPHA Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHA 2219 Score = 59.7 bits (138), Expect = 2e-09 Identities = 23/34 (67%), Positives = 30/34 (88%) Frame = +3 Query: 96 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 197 +V+DNGSG CKAG + D++PR VFP+IVGRPRH+ Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130 >SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) Length = 367 Score = 83.0 bits (196), Expect = 2e-16 Identities = 38/81 (46%), Positives = 54/81 (66%) Frame = +2 Query: 371 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVS 550 +HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+ Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185 Query: 551 STPCPSTRGYALPHAILASGL 613 S P G+A+PH+I+ + + Sbjct: 186 SHSVPIYEGFAMPHSIMRTDI 206 >SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) Length = 240 Score = 71.3 bits (167), Expect = 6e-13 Identities = 35/111 (31%), Positives = 60/111 (54%) Frame = +2 Query: 281 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 460 PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62 Query: 461 PAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAILASGL 613 PA ++ +VL+ +A+ ++ P GY L AI+ S L Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPL 113 >SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) Length = 1392 Score = 59.7 bits (138), Expect = 2e-09 Identities = 27/39 (69%), Positives = 29/39 (74%) Frame = +3 Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 197 E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392 >SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) Length = 152 Score = 57.6 bits (133), Expect = 8e-09 Identities = 32/55 (58%), Positives = 35/55 (63%) Frame = +2 Query: 437 IMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601 IMFE FN+PA+YVAIQAVLSLYAS + S P GYALPHAIL Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAIL 55 >SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) Length = 921 Score = 52.0 bits (119), Expect = 4e-07 Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 3/67 (4%) Frame = +3 Query: 66 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 236 FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752 Query: 237 GDEAQSK 257 GD A +K Sbjct: 753 GDAAVAK 759 >SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) Length = 372 Score = 46.0 bits (104), Expect = 3e-05 Identities = 18/38 (47%), Positives = 23/38 (60%) Frame = +2 Query: 275 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 388 K+PI H IV +WD ME+ W + LR PE+H LL Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336 Score = 32.3 bits (70), Expect = 0.35 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +1 Query: 508 RRTTGIVLDSGDGVFHTVPI 567 R TG V+DSGDGV H +P+ Sbjct: 353 RTLTGCVIDSGDGVTHVIPV 372 >SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) Length = 543 Score = 39.5 bits (88), Expect = 0.002 Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = +1 Query: 508 RRTTGIVLDSGDGVFHTVPIYEGIRTSPRHSCV--WTLAGRDLT 633 R TG V+DSGDGV H +P+ EG SC+ +AGRD+T Sbjct: 59 RTLTGCVIDSGDGVTHVIPVAEGYVIG---SCIKHIPIAGRDIT 99 >SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 198 Score = 34.7 bits (76), Expect = 0.067 Identities = 18/39 (46%), Positives = 25/39 (64%) Frame = -3 Query: 194 MAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFV 78 MA + D G++ + SI+S E GLAHTGAI+ Q + V Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39 >SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 220 Score = 31.5 bits (68), Expect = 0.62 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = +2 Query: 272 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 424 L+ P + +VT+++ E++ H F + P HPV++TE NP R+ Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183 >SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 120 Score = 31.5 bits (68), Expect = 0.62 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -1 Query: 169 GNTARGASSPAKPALHIPEPLSTT 98 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) Length = 170 Score = 31.5 bits (68), Expect = 0.62 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -1 Query: 169 GNTARGASSPAKPALHIPEPLSTT 98 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) Length = 563 Score = 30.7 bits (66), Expect = 1.1 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = +3 Query: 441 CSKHSTRPPCTSPSKPCSRCTRPSYHRYRAG 533 C H+ R P T+PS PC S Y AG Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390 >SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 749 Score = 30.3 bits (65), Expect = 1.4 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -1 Query: 169 GNTARGASSPAKPALHIPEPLSTT 98 GNT R PAKP+L++P P S T Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563 >SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1259 Score = 30.3 bits (65), Expect = 1.4 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = +1 Query: 397 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 489 SP P+ R D+P V A HV HPSR Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295 >SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) Length = 580 Score = 29.9 bits (64), Expect = 1.9 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +2 Query: 281 PIEHGIVTNWDDMEKIWHHTFYNE 352 P + G + NWD ++IW +TF E Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315 Score = 27.9 bits (59), Expect = 7.6 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +3 Query: 84 EVAALVVDNGSGMCKAGFAGDDAPRAV 164 ++A LV+D G+ K GFA + APR++ Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258 >SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) Length = 458 Score = 29.5 bits (63), Expect = 2.5 Identities = 22/71 (30%), Positives = 31/71 (43%) Frame = +1 Query: 355 ACRPRGTPRPAY*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRRTTGIVLD 534 ACR R PR P P+ + ++D D +I R P R + V +T G+ + Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260 Query: 535 SGDGVFHTVPI 567 G H VPI Sbjct: 261 ITGGKEHGVPI 271 >SB_717| Best HMM Match : Glyco_hydro_63 (HMM E-Value=0.00015) Length = 1052 Score = 29.5 bits (63), Expect = 2.5 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = -2 Query: 615 QSPDARMAWGSAYPLVDGHGVEDTVAGVQHDTGGTTDAYSESTAWMATYMAGVLNVS 445 + PD +G + +D GV D + GG ++ TAWMA Y +LN+S Sbjct: 638 KDPDGLNLFGGGFLGLDNVGVFDRSKTLP---GGGRLCQADGTAWMALYCIVMLNIS 691 >SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 130 Score = 28.3 bits (60), Expect = 5.8 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -1 Query: 169 GNTARGASSPAKPALHIPEPLSTT 98 GNT R AKPAL++P P S T Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63 >SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 635 Score = 28.3 bits (60), Expect = 5.8 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -1 Query: 169 GNTARGASSPAKPALHIPEPLSTT 98 GNT R PAKP L IP P + T Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91 >SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 4856 Score = 27.9 bits (59), Expect = 7.6 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 9/54 (16%) Frame = -2 Query: 312 SQLVTIPCSMGYLRVRIPLCSVPHLLHKS---------PSVPYRPSRPDGGAFP 178 S+ ++IP G+ R L P L H S P+ PY PS+ G +FP Sbjct: 3759 SKPISIPSRDGHARAATSLPGSPQLSHLSGRFSSDDVSPTPPYSPSQKQGFSFP 3812 >SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 5659 Score = 27.9 bits (59), Expect = 7.6 Identities = 22/86 (25%), Positives = 35/86 (40%) Frame = +2 Query: 350 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSC 529 E +APE + E L+P+ T + T TP VA + +VVP + Sbjct: 2812 ETTMAPET--TVEPETTLSPETTVAPETTVALGTTVTPETTVAPETTEEPETTVVPETTA 2869 Query: 530 WTPATVSSTPCPSTRGYALPHAILAS 607 T++ + ALP + +AS Sbjct: 2870 VPETTITQETTVAPETTALPESTVAS 2895 >SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 221 Score = 27.9 bits (59), Expect = 7.6 Identities = 18/57 (31%), Positives = 25/57 (43%) Frame = -2 Query: 246 PHLLHKSPSVPYRPSRPDGGAFPRSRETLREEHHLLRSRPCTYRSHCLLPTRQLLRR 76 P L +P + RPS + S + LL RP TYR+ LP+ LL + Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,237,487 Number of Sequences: 59808 Number of extensions: 565429 Number of successful extensions: 2083 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 1759 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2056 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1669334250 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -