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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1298
         (655 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)              193   1e-49
SB_56| Best HMM Match : Actin (HMM E-Value=0)                         193   1e-49
SB_56628| Best HMM Match : Actin (HMM E-Value=0)                      193   1e-49
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)             192   2e-49
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)              183   1e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)             126   1e-29
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)             105   2e-23
SB_54| Best HMM Match : Actin (HMM E-Value=0)                          99   2e-21
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)             83   2e-16
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)                  71   6e-13
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)                  60   2e-09
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)                     58   8e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)                 52   4e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)               46   3e-05
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)                 40   0.002
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.067
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.62 
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.62 
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)                    31   0.62 
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)                    31   1.1  
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)                  30   1.9  
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)                    29   2.5  
SB_717| Best HMM Match : Glyco_hydro_63 (HMM E-Value=0.00015)          29   2.5  
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.6  
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.6  
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.6  

>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score =  193 bits (470), Expect = 1e-49
 Identities = 93/116 (80%), Positives = 96/116 (82%)
 Frame = +2

Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
           +RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
           QIMFETFN+PAMYVAIQAVLSLYAS              +   P   GYALPHAIL
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL 176



 Score =  125 bits (302), Expect = 3e-29
 Identities = 57/60 (95%), Positives = 60/60 (100%)
 Frame = +3

Query: 78  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
           +++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61


>SB_56| Best HMM Match : Actin (HMM E-Value=0)
          Length = 375

 Score =  193 bits (470), Expect = 1e-49
 Identities = 93/116 (80%), Positives = 96/116 (82%)
 Frame = +2

Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
           +RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
           QIMFETFN+PAMYVAIQAVLSLYAS              +   P   GYALPHAIL
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL 176



 Score =  126 bits (305), Expect = 1e-29
 Identities = 58/60 (96%), Positives = 60/60 (100%)
 Frame = +3

Query: 78  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
           ++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61


>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
          Length = 376

 Score =  193 bits (470), Expect = 1e-49
 Identities = 93/116 (80%), Positives = 96/116 (82%)
 Frame = +2

Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
           +RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121

Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
           QIMFETFN+PAMYVAIQAVLSLYAS              +   P   GYALPHAIL
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL 177



 Score =  132 bits (320), Expect = 2e-31
 Identities = 60/62 (96%), Positives = 62/62 (100%)
 Frame = +3

Query: 72  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
           MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 252 SK 257
           SK
Sbjct: 61  SK 62


>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 376

 Score =  192 bits (468), Expect = 2e-49
 Identities = 92/116 (79%), Positives = 96/116 (82%)
 Frame = +2

Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
           +RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121

Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
           QIMFETFN+PAMYVAIQAVLSLYAS              +   P   GYALPHAI+
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAII 177



 Score =  128 bits (309), Expect = 4e-30
 Identities = 59/62 (95%), Positives = 61/62 (98%)
 Frame = +3

Query: 72  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
           M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 252 SK 257
           SK
Sbjct: 61  SK 62


>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 349

 Score =  183 bits (445), Expect = 1e-46
 Identities = 83/85 (97%), Positives = 85/85 (100%)
 Frame = +2

Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
           +RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121

Query: 434 QIMFETFNTPAMYVAIQAVLSLYAS 508
           QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146



 Score =  128 bits (309), Expect = 4e-30
 Identities = 57/62 (91%), Positives = 61/62 (98%)
 Frame = +3

Query: 72  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
           M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 252 SK 257
           SK
Sbjct: 61  SK 62



 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 19/21 (90%), Positives = 20/21 (95%)
 Frame = +1

Query: 511 RTTGIVLDSGDGVFHTVPIYE 573
           RTTGIV+DSGDGV HTVPIYE
Sbjct: 148 RTTGIVMDSGDGVSHTVPIYE 168


>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 338

 Score =  126 bits (305), Expect = 1e-29
 Identities = 57/60 (95%), Positives = 60/60 (100%)
 Frame = +3

Query: 78  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
           D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61



 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 34/62 (54%), Positives = 39/62 (62%)
 Frame = +2

Query: 416 NREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHA 595
           N + M +IMFETFN+PAMYVAIQAVLSLYAS              +   P   GYALPHA
Sbjct: 78  NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137

Query: 596 IL 601
           I+
Sbjct: 138 II 139



 Score = 60.9 bits (141), Expect = 9e-10
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = +2

Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTF 343
           +RGILTLKYPIEHGIVTNWDDMEKI   TF
Sbjct: 61  KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90


>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 411

 Score =  105 bits (253), Expect = 2e-23
 Identities = 50/116 (43%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
 Frame = +2

Query: 248 TEQRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 424
           ++ R +L + YP+++GIV NWDDM+ +W +TF  +++ + P    VLLTE PLNP  NRE
Sbjct: 62  SQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNRE 121

Query: 425 KMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPH 592
           KM ++MFE +    +Y+AIQAVL+LYA  +            +  CP   G+ALPH
Sbjct: 122 KMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPH 177



 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
 Frame = +3

Query: 90  AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 248
           + +V DNG+G  K G+AG + P  +FPS+VGRP  R    +  +  KD  VGDEA
Sbjct: 7   SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61


>SB_54| Best HMM Match : Actin (HMM E-Value=0)
          Length = 2486

 Score =   99 bits (238), Expect = 2e-21
 Identities = 50/91 (54%), Positives = 62/91 (68%)
 Frame = +2

Query: 323  KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 502
            K+W H F ++LRV  E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188

Query: 503  ASVVPPVSCWTPATVSSTPCPSTRGYALPHA 595
            AS     + +      S   P   GY LPHA
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHA 2219



 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 23/34 (67%), Positives = 30/34 (88%)
 Frame = +3

Query: 96   LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 197
            +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130


>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
          Length = 367

 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 38/81 (46%), Positives = 54/81 (66%)
 Frame = +2

Query: 371 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVS 550
           +HPVLLTEAPLNP+ NREK  ++ FETFN PA+++++QAVLSLYA+              
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185

Query: 551 STPCPSTRGYALPHAILASGL 613
           S   P   G+A+PH+I+ + +
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDI 206


>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
          Length = 240

 Score = 71.3 bits (167), Expect = 6e-13
 Identities = 35/111 (31%), Positives = 60/111 (54%)
 Frame = +2

Query: 281 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 460
           PI+ G++ +WD  EKI  + +   ++     HP+L++EA  N +  REK+T++MFE +N 
Sbjct: 3   PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62

Query: 461 PAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAILASGL 613
           PA ++   +VL+ +A+              ++  P   GY L  AI+ S L
Sbjct: 63  PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPL 113


>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
          Length = 1392

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 27/39 (69%), Positives = 29/39 (74%)
 Frame = +3

Query: 81   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 197
            E    LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392


>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
          Length = 152

 Score = 57.6 bits (133), Expect = 8e-09
 Identities = 32/55 (58%), Positives = 35/55 (63%)
 Frame = +2

Query: 437 IMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
           IMFE FN+PA+YVAIQAVLSLYAS       +      S   P   GYALPHAIL
Sbjct: 1   IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAIL 55


>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
          Length = 921

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
 Frame = +3

Query: 66  FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 236
           FK+      A+V+DNG G+ K GFAGD  PR + P++VG P+   +++G  +  KD    
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752

Query: 237 GDEAQSK 257
           GD A +K
Sbjct: 753 GDAAVAK 759


>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
          Length = 372

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = +2

Query: 275 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 388
           K+PI H IV +WD ME+ W    +  LR  PE+H  LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336



 Score = 32.3 bits (70), Expect = 0.35
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +1

Query: 508 RRTTGIVLDSGDGVFHTVPI 567
           R  TG V+DSGDGV H +P+
Sbjct: 353 RTLTGCVIDSGDGVTHVIPV 372


>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
          Length = 543

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +1

Query: 508 RRTTGIVLDSGDGVFHTVPIYEGIRTSPRHSCV--WTLAGRDLT 633
           R  TG V+DSGDGV H +P+ EG       SC+    +AGRD+T
Sbjct: 59  RTLTGCVIDSGDGVTHVIPVAEGYVIG---SCIKHIPIAGRDIT 99


>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 198

 Score = 34.7 bits (76), Expect = 0.067
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = -3

Query: 194 MAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFV 78
           MA  + D G++ + SI+S E GLAHTGAI+  Q  +  V
Sbjct: 1   MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39


>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 220

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +2

Query: 272 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 424
           L+ P +  +VT+++  E++  H F +     P    HPV++TE   NP   R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183


>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 120

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1

Query: 169 GNTARGASSPAKPALHIPEPLSTT 98
           GNT R    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
          Length = 170

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1

Query: 169 GNTARGASSPAKPALHIPEPLSTT 98
           GNT R    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
          Length = 563

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +3

Query: 441 CSKHSTRPPCTSPSKPCSRCTRPSYHRYRAG 533
           C  H+ R P T+PS PC      S   Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390


>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 749

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -1

Query: 169 GNTARGASSPAKPALHIPEPLSTT 98
           GNT R    PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563


>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1259

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +1

Query: 397 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 489
           SP P+   R D+P  V     A HV  HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295


>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
          Length = 580

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 281 PIEHGIVTNWDDMEKIWHHTFYNE 352
           P + G + NWD  ++IW +TF  E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315



 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 84  EVAALVVDNGSGMCKAGFAGDDAPRAV 164
           ++A LV+D G+   K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258


>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
          Length = 458

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 22/71 (30%), Positives = 31/71 (43%)
 Frame = +1

Query: 355 ACRPRGTPRPAY*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRRTTGIVLD 534
           ACR R  PR      P P+  + ++D D   +I   R     P R + V   +T G+ + 
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260

Query: 535 SGDGVFHTVPI 567
              G  H VPI
Sbjct: 261 ITGGKEHGVPI 271


>SB_717| Best HMM Match : Glyco_hydro_63 (HMM E-Value=0.00015)
          Length = 1052

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -2

Query: 615 QSPDARMAWGSAYPLVDGHGVEDTVAGVQHDTGGTTDAYSESTAWMATYMAGVLNVS 445
           + PD    +G  +  +D  GV D    +    GG     ++ TAWMA Y   +LN+S
Sbjct: 638 KDPDGLNLFGGGFLGLDNVGVFDRSKTLP---GGGRLCQADGTAWMALYCIVMLNIS 691


>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -1

Query: 169 GNTARGASSPAKPALHIPEPLSTT 98
           GNT R     AKPAL++P P S T
Sbjct: 40  GNTNRRTRIQAKPALNLPSPPSKT 63


>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 635

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -1

Query: 169 GNTARGASSPAKPALHIPEPLSTT 98
           GNT R    PAKP L IP P + T
Sbjct: 68  GNTNRRTRIPAKPTLTIPSPPTKT 91


>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4856

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
 Frame = -2

Query: 312  SQLVTIPCSMGYLRVRIPLCSVPHLLHKS---------PSVPYRPSRPDGGAFP 178
            S+ ++IP   G+ R    L   P L H S         P+ PY PS+  G +FP
Sbjct: 3759 SKPISIPSRDGHARAATSLPGSPQLSHLSGRFSSDDVSPTPPYSPSQKQGFSFP 3812


>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 5659

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 22/86 (25%), Positives = 35/86 (40%)
 Frame = +2

Query: 350  ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSC 529
            E  +APE    +  E  L+P+      T +   T  TP   VA +       +VVP  + 
Sbjct: 2812 ETTMAPET--TVEPETTLSPETTVAPETTVALGTTVTPETTVAPETTEEPETTVVPETTA 2869

Query: 530  WTPATVSSTPCPSTRGYALPHAILAS 607
                T++     +    ALP + +AS
Sbjct: 2870 VPETTITQETTVAPETTALPESTVAS 2895


>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 221

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -2

Query: 246 PHLLHKSPSVPYRPSRPDGGAFPRSRETLREEHHLLRSRPCTYRSHCLLPTRQLLRR 76
           P  L  +P +  RPS      +  S  +      LL  RP TYR+   LP+  LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,237,487
Number of Sequences: 59808
Number of extensions: 565429
Number of successful extensions: 2083
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2056
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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