Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1298
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 194 5e-50
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 194 5e-50
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 194 5e-50
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 194 5e-50
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 194 5e-50
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 194 5e-50
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 194 5e-50
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 194 5e-50
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 194 5e-50
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 194 5e-50
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 189 1e-48
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 134 7e-32
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 134 7e-32
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 132 2e-31
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 132 2e-31
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 130 8e-31
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 107 9e-24
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 102 3e-22
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 81 9e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.011
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.011
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z79755-8|CAB02113.1| 270|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF169201-1|AAF01678.1| 270|Caenorhabditis elegans CES-1 protein. 29 2.2
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 2.9
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 28 5.0
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.7
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 8.8
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 8.8
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 8.8
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 8.8
AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical ... 27 8.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 194 bits (473), Expect = 5e-50
Identities = 94/116 (81%), Positives = 96/116 (82%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFNTPAMYVAIQAVLSLYAS + P GYALPHAIL
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Score = 134 bits (323), Expect = 7e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +3
Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 194 bits (473), Expect = 5e-50
Identities = 94/116 (81%), Positives = 96/116 (82%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFNTPAMYVAIQAVLSLYAS + P GYALPHAIL
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIL 177
Score = 132 bits (320), Expect = 2e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +3
Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 194 bits (473), Expect = 5e-50
Identities = 94/116 (81%), Positives = 96/116 (82%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFNTPAMYVAIQAVLSLYAS + P GYALPHAIL
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Score = 134 bits (323), Expect = 7e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +3
Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 194 bits (473), Expect = 5e-50
Identities = 94/116 (81%), Positives = 96/116 (82%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFNTPAMYVAIQAVLSLYAS + P GYALPHAIL
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Score = 134 bits (323), Expect = 7e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +3
Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 194 bits (473), Expect = 5e-50
Identities = 94/116 (81%), Positives = 96/116 (82%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFNTPAMYVAIQAVLSLYAS + P GYALPHAIL
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Score = 134 bits (323), Expect = 7e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +3
Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 194 bits (473), Expect = 5e-50
Identities = 94/116 (81%), Positives = 96/116 (82%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFNTPAMYVAIQAVLSLYAS + P GYALPHAIL
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIL 177
Score = 131 bits (316), Expect = 5e-31
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +3
Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 194 bits (473), Expect = 5e-50
Identities = 94/116 (81%), Positives = 96/116 (82%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFNTPAMYVAIQAVLSLYAS + P GYALPHAIL
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Score = 134 bits (323), Expect = 7e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +3
Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 194 bits (473), Expect = 5e-50
Identities = 94/116 (81%), Positives = 96/116 (82%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 18 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 77
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFNTPAMYVAIQAVLSLYAS + P GYALPHAIL
Sbjct: 78 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 133
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +3
Query: 204 MVGMGQKDSYVGDEAQSK 257
MVGMGQKDSYVGDEAQSK
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 194 bits (473), Expect = 5e-50
Identities = 94/116 (81%), Positives = 96/116 (82%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 48 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 107
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFNTPAMYVAIQAVLSLYAS + P GYALPHAIL
Sbjct: 108 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 163
Score = 95.5 bits (227), Expect = 3e-20
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 126 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 194 bits (473), Expect = 5e-50
Identities = 94/116 (81%), Positives = 96/116 (82%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFNTPAMYVAIQAVLSLYAS + P GYALPHAIL
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Score = 134 bits (323), Expect = 7e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +3
Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 189 bits (461), Expect = 1e-48
Identities = 93/116 (80%), Positives = 98/116 (84%), Gaps = 1/116 (0%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMT 120
Query: 434 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSSTPCPSTRGYALPHAI 598
QIMFETFNTPAMYV IQAVLSLYAS + T V+ T P GYALPHAI
Sbjct: 121 QIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHT-VPIYEGYALPHAI 175
Score = 127 bits (307), Expect = 6e-30
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +3
Query: 78 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 134 bits (323), Expect = 7e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +3
Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKI 328
+RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 134 bits (323), Expect = 7e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +3
Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKI 328
+RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 132 bits (320), Expect = 2e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +3
Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKI 328
+RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 132 bits (320), Expect = 2e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +3
Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 251
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 51.6 bits (118), Expect = 5e-07
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDM 319
+RGILTLKYPIEHGIVTNWDDM
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 130 bits (314), Expect = 8e-31
Identities = 59/115 (51%), Positives = 80/115 (69%), Gaps = 1/115 (0%)
Frame = +2
Query: 257 RGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 433
RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+
Sbjct: 65 RGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSA 124
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAI 598
+I FETFN PA+Y+ +QAVLSLYA+ + P +G+A+ HAI
Sbjct: 125 EIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAI 179
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +3
Query: 96 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 254
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 107 bits (256), Expect = 9e-24
Identities = 53/116 (45%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Frame = +2
Query: 248 TEQRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANRE 424
++ R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NRE
Sbjct: 62 SQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNRE 121
Query: 425 KMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPH 592
KM Q+MFE + ++YVA+QAVL+LYA + + CP G+AL H
Sbjct: 122 KMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHH 177
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +3
Query: 96 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 245
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEE 60
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 102 bits (244), Expect = 3e-22
Identities = 45/80 (56%), Positives = 56/80 (70%)
Frame = +2
Query: 269 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 448
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 449 TFNTPAMYVAIQAVLSLYAS 508
+FN P +Y+A+QAVL+L AS
Sbjct: 140 SFNVPGLYIAVQAVLALTAS 159
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +1
Query: 508 RRTTGIVLDSGDGVFHTVPIYEGIRTSPRHSCV--WTLAGRDLT 633
R TG+V+DSGDGV H +P+ +G SC+ +AGRD+T
Sbjct: 168 RSLTGLVIDSGDGVTHCIPVADGYVIG---SCIKHIPIAGRDIT 208
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 72 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 179
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 80.6 bits (190), Expect = 9e-16
Identities = 39/106 (36%), Positives = 60/106 (56%)
Frame = +2
Query: 284 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 463
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 464 AMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
A Y++ VLS +A ++ P GYA+ HA++
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVV 199
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 179
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 281 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 454
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 281 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 454
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = -2
Query: 333 CQIFSMSSQLVTIPC-SMGYLRVRIPLCSVPHLLHKSPSVP-YRPSRPD 193
CQ+FS QLVT+ SMG +++++ + +P L KS + P P+ P+
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPE 299
>Z79755-8|CAB02113.1| 270|Caenorhabditis elegans Hypothetical
protein F43G9.11 protein.
Length = 270
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +2
Query: 269 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 448
T+ P++ I+ N D ++WH L + ++ T + + + E + +
Sbjct: 12 TVAPPVDFPIIGNCDFQAQLWH---LMSLHLQMQKSSAASTSSSSSSSTSSENLKKSPSS 68
Query: 449 TFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCP--STRGYAL 586
NT +I +L+ + VP + VSS+P P ST GY L
Sbjct: 69 VQNTSVF--SIDNILN--SQKVPKLELENDEDVSSSPSPTCSTTGYTL 112
>AF169201-1|AAF01678.1| 270|Caenorhabditis elegans CES-1 protein.
Length = 270
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +2
Query: 269 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 448
T+ P++ I+ N D ++WH L + ++ T + + + E + +
Sbjct: 12 TVAPPVDFPIIGNCDFQAQLWH---LMSLHLQMQKSSAASTSSSSSSSTSSENLKKSPSS 68
Query: 449 TFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCP--STRGYAL 586
NT +I +L+ + VP + VSS+P P ST GY L
Sbjct: 69 VQNTSVF--SIDNILN--SQKVPKLELENDEDVSSSPSPTCSTTGYTL 112
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/69 (27%), Positives = 27/69 (39%)
Frame = +2
Query: 365 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPAT 544
P P + +P P T + T +T A + A VPPV+ TP T
Sbjct: 629 PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT 688
Query: 545 VSSTPCPST 571
+ST +T
Sbjct: 689 TTSTTTTTT 697
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/69 (27%), Positives = 27/69 (39%)
Frame = +2
Query: 365 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPAT 544
P P + +P P T + T +T A + A VPPV+ TP T
Sbjct: 685 PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT 744
Query: 545 VSSTPCPST 571
+ST +T
Sbjct: 745 TTSTTTTTT 753
>Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical
protein C44H4.1 protein.
Length = 586
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 503 ASVVPPVSCWTPATVSSTPCPSTRGYALPH 592
AS PP CWTP+ +S T LPH
Sbjct: 435 ASNSPPAKCWTPSNLSGLDLRQTDS-KLPH 463
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = +2
Query: 419 REKMTQIMFETFN------TPAMYVAIQAVLSLYASVVPPVSCWTPATVSST 556
R++ Q+ F+T + TP + VA+ +S P+ CWTP S +
Sbjct: 17 RKQQGQLAFDTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSGS 68
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = +2
Query: 419 REKMTQIMFETFN------TPAMYVAIQAVLSLYASVVPPVSCWTPATVSST 556
R++ Q+ F+T + TP + VA+ +S P+ CWTP S +
Sbjct: 17 RKQQGQLAFDTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSGS 68
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 126 KAGFAGDDAPRAVFPSIVGRPRHQG 200
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 151 ASSPAKPALHIPEPLSTTNAATSS 80
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 151 ASSPAKPALHIPEPLSTTNAATSS 80
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 151 ASSPAKPALHIPEPLSTTNAATSS 80
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 151 ASSPAKPALHIPEPLSTTNAATSS 80
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical
protein T24A6.11 protein.
Length = 359
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 471 TSPSKPCSRCTRPSY 515
TSPSK CS C RP++
Sbjct: 6 TSPSKQCSICQRPAF 20
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,469,703
Number of Sequences: 27780
Number of extensions: 387373
Number of successful extensions: 1537
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1509
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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