BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1298 (655 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 194 6e-50 At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 193 7e-50 At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 193 7e-50 At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 192 2e-49 At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 191 4e-49 At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 191 4e-49 At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 188 2e-48 At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 188 2e-48 At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 188 2e-48 At2g42100.1 68415.m05205 actin, putative very strong similarity ... 174 4e-44 At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 167 6e-42 At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 164 4e-41 At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 112 2e-25 At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 95 3e-20 At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 87 1e-17 At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 68 5e-12 At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 2e-10 At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 58 4e-09 At3g12380.1 68416.m01543 actin/actin-like family protein similar... 49 3e-06 At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.095 At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 1.9 At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 2.7 At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 2.7 At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.6 At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.6 At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 29 3.6 At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 4.7 At2g21830.1 68415.m02594 DC1 domain-containing protein contains ... 28 6.2 At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.2 At4g30070.1 68417.m04277 plant defensin-fusion protein, putative... 27 8.2 At1g31070.2 68414.m03804 UDP-N-acetylglucosamine pyrophosphoryla... 27 8.2 >At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496 Actin 11 {Arabidopsis thaliana} Length = 377 Score = 194 bits (472), Expect = 6e-50 Identities = 94/116 (81%), Positives = 96/116 (82%) Frame = +2 Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433 +RGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122 Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601 QIMFETFNTPAMYVAIQAVLSLYAS S P GYALPHAIL Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178 Score = 110 bits (265), Expect = 7e-25 Identities = 50/59 (84%), Positives = 54/59 (91%) Frame = +3 Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63 >At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 Actin 4 {Arabidopsis thaliana} Length = 377 Score = 193 bits (471), Expect = 7e-50 Identities = 94/116 (81%), Positives = 95/116 (81%) Frame = +2 Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433 +RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122 Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601 QIMFETFNTPAMYVAIQAVLSLYAS S P GYALPHAIL Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178 Score = 110 bits (265), Expect = 7e-25 Identities = 50/59 (84%), Positives = 54/59 (91%) Frame = +3 Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63 >At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497 Actin 12 {Arabidopsis thaliana} Length = 377 Score = 193 bits (471), Expect = 7e-50 Identities = 94/116 (81%), Positives = 95/116 (81%) Frame = +2 Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433 +RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122 Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601 QIMFETFNTPAMYVAIQAVLSLYAS S P GYALPHAIL Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178 Score = 110 bits (265), Expect = 7e-25 Identities = 50/59 (84%), Positives = 54/59 (91%) Frame = +3 Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63 >At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana} Length = 377 Score = 192 bits (467), Expect = 2e-49 Identities = 93/116 (80%), Positives = 95/116 (81%) Frame = +2 Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433 +RGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122 Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601 QIMFETFN PAMYVAIQAVLSLYAS S P GYALPHAIL Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178 Score = 110 bits (265), Expect = 7e-25 Identities = 50/59 (84%), Positives = 54/59 (91%) Frame = +3 Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63 >At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 Actin 3 {Arabidopsis thaliana}; supported by full-length cDNA: Ceres: 19581. Length = 377 Score = 191 bits (465), Expect = 4e-49 Identities = 92/116 (79%), Positives = 94/116 (81%) Frame = +2 Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433 +RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122 Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601 QIMFETFN PAMYVAIQAVLSLYAS S P GYALPHAIL Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178 Score = 110 bits (265), Expect = 7e-25 Identities = 50/59 (84%), Positives = 54/59 (91%) Frame = +3 Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63 >At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 Actin 1 (Actin 3) {Arabidopsis thaliana} Length = 377 Score = 191 bits (465), Expect = 4e-49 Identities = 92/116 (79%), Positives = 94/116 (81%) Frame = +2 Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433 +RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122 Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601 QIMFETFN PAMYVAIQAVLSLYAS S P GYALPHAIL Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178 Score = 110 bits (265), Expect = 7e-25 Identities = 50/59 (84%), Positives = 54/59 (91%) Frame = +3 Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63 >At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 Length = 377 Score = 188 bits (459), Expect = 2e-48 Identities = 89/116 (76%), Positives = 96/116 (82%) Frame = +2 Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433 +RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122 Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601 QIMFETFN+PAMYVAIQAVLSLYAS S P G++LPHAIL Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAIL 178 Score = 106 bits (254), Expect = 1e-23 Identities = 46/59 (77%), Positives = 53/59 (89%) Frame = +3 Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257 +++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63 >At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 Length = 371 Score = 188 bits (459), Expect = 2e-48 Identities = 89/116 (76%), Positives = 96/116 (82%) Frame = +2 Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433 +RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122 Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601 QIMFETFN+PAMYVAIQAVLSLYAS S P G++LPHAIL Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAIL 178 Score = 106 bits (254), Expect = 1e-23 Identities = 46/59 (77%), Positives = 53/59 (89%) Frame = +3 Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257 +++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63 >At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 Actin 8 {Arabidopsis thaliana}; nearly identical to SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and to At3g18780 Length = 377 Score = 188 bits (459), Expect = 2e-48 Identities = 89/116 (76%), Positives = 96/116 (82%) Frame = +2 Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433 +RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122 Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601 QIMFETFN+PAMYVAIQAVLSLYAS S P G++LPHAIL Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAIL 178 Score = 106 bits (254), Expect = 1e-23 Identities = 46/59 (77%), Positives = 53/59 (89%) Frame = +3 Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257 +++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63 >At2g42100.1 68415.m05205 actin, putative very strong similarity to SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493 Actin 3 {Arabidopsis thaliana}; contains Pfam profile PF00022: Actin Length = 378 Score = 174 bits (424), Expect = 4e-44 Identities = 81/116 (69%), Positives = 91/116 (78%) Frame = +2 Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433 +RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMT Sbjct: 64 RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMT 123 Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601 QIMFE+F P+MY+ IQAVLSLY+S S P GYALPHAIL Sbjct: 124 QIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 179 Score = 102 bits (245), Expect = 2e-22 Identities = 44/59 (74%), Positives = 54/59 (91%) Frame = +3 Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257 +E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++ Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64 >At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin 11 {Arabidopsis thaliana}; contains Pfam profile PF00022: Actin Length = 366 Score = 167 bits (406), Expect = 6e-42 Identities = 93/151 (61%), Positives = 103/151 (68%), Gaps = 1/151 (0%) Frame = +2 Query: 200 RDGRYGTEGLLCRR*GTEQRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 379 RDG E + G R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93 Query: 380 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSST 556 VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+S V VS T Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153 Query: 557 PCPSTRGYALPHAILASGLWPVVTSQDYLIE 649 P GYALPH IL L + DYLIE Sbjct: 154 -VPVYEGYALPHGILRLDLGGRDLT-DYLIE 182 Score = 59.7 bits (138), Expect = 2e-09 Identities = 27/53 (50%), Positives = 36/53 (67%) Frame = +3 Query: 96 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 254 +V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51 >At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Arabidopsis thaliana] gi|9293903|dbj|BAB01806 Length = 329 Score = 164 bits (399), Expect = 4e-41 Identities = 78/114 (68%), Positives = 89/114 (78%) Frame = +2 Query: 260 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 439 GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQI Sbjct: 20 GILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQI 79 Query: 440 MFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601 MFETF P+MY+ +QA LSL+AS + S P G ALPHAIL Sbjct: 80 MFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAIL 133 >At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly identical to actin-related protein 2 (ARP2) [Arabidopsis thaliana] GI:3818624; contains Pfam profile PF00022: Actin Length = 389 Score = 112 bits (270), Expect = 2e-25 Identities = 51/115 (44%), Positives = 70/115 (60%) Frame = +2 Query: 248 TEQRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427 +E R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119 Query: 428 MTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPH 592 M + MFE +N +++ IQAVL+LYA + + P GY+ PH Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 Score = 49.2 bits (112), Expect = 2e-06 Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%) Frame = +3 Query: 96 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 242 +V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57 >At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical to actin-related protein 3 (ARP3) [Arabidopsis thaliana] GI:21427461; contains Pfam profile PF00022: Actin Length = 427 Score = 95.5 bits (227), Expect = 3e-20 Identities = 41/78 (52%), Positives = 54/78 (69%) Frame = +2 Query: 272 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 451 L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145 Query: 452 FNTPAMYVAIQAVLSLYA 505 FN P +Y+A+ +VL+L A Sbjct: 146 FNVPGLYIAVNSVLALAA 163 Score = 35.9 bits (79), Expect = 0.024 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = +3 Query: 93 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 179 A+V+DNG+G K GFAG+ P + P++V Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36 Score = 35.1 bits (77), Expect = 0.041 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 2/41 (4%) Frame = +1 Query: 517 TGIVLDSGDGVFHTVPIYEGIRTSPRHSCVWT--LAGRDLT 633 TG+V+D GDG H VP+ EG SC+ + +AG+D+T Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIG---SCIKSIPIAGKDVT 210 >At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary identical to actin-related protein 4 (ARP4) [Arabidopsis thaliana] GI:21427463; contains Pfam profile PF00022: Actin; supporting cDNA gi|21427462|gb|AF507912.1| Length = 441 Score = 87.0 bits (206), Expect = 1e-17 Identities = 43/111 (38%), Positives = 65/111 (58%) Frame = +2 Query: 281 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 460 PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK ++MFE + Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKV 153 Query: 461 PAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAILASGL 613 PA+++A VL+ +A+ S+T P GY L A+++S L Sbjct: 154 PALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPL 204 Score = 56.8 bits (131), Expect = 1e-08 Identities = 23/34 (67%), Positives = 31/34 (91%) Frame = +3 Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 182 +EV+A+VVD GS CKAG+AG+DAP+AVFPS++G Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38 >At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical to actin-related protein 7 (ARP7) [Arabidopsis thaliana] GI:21427469; contains Pfam profile PF00022: Actin Length = 363 Score = 68.1 bits (159), Expect = 5e-12 Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Frame = +2 Query: 281 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 457 PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116 Query: 458 TPAMYVAIQAVLSLYA 505 Y + QAVLSLYA Sbjct: 117 VSGFYASEQAVLSLYA 132 Score = 27.5 bits (58), Expect = 8.2 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +3 Query: 93 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 185 ALVVD GS KAG A D +P + PS + R Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34 >At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical to actin-related protein 5 (ARP5) GI:21489922 from [Arabidopsis thaliana] Length = 145 Score = 62.5 bits (145), Expect = 2e-10 Identities = 26/58 (44%), Positives = 37/58 (63%) Frame = +2 Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427 +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136 Score = 57.2 bits (132), Expect = 9e-09 Identities = 24/34 (70%), Positives = 31/34 (91%) Frame = +3 Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 182 +EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38 >At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly identical to actin-related protein 6 (ARP6) [Arabidopsis thaliana] GI:21427467; contains Pfam profile PF00022: Actin Length = 421 Score = 58.4 bits (135), Expect = 4e-09 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 3/112 (2%) Frame = +2 Query: 272 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 451 ++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120 Query: 452 FNTPAMYVA-IQAVLSLYASVVPPVSCWTPATVSSTPCPST--RGYALPHAI 598 F ++Y+A Q+++ LY + P S +S T C G++ HA+ Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDS-----ILSKTQCSLVVDCGFSFTHAV 167 Score = 32.7 bits (71), Expect = 0.22 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3 Query: 96 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 188 +V+DNG G+ KAG G+ P V P+ + +P Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35 >At3g12380.1 68416.m01543 actin/actin-like family protein similar to SP|P53946 Actin-like protein ARP5 {Saccharomyces cerevisiae}; contains Pfam profile PF00022: Actin Length = 724 Score = 48.8 bits (111), Expect = 3e-06 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = +2 Query: 281 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 457 P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+ Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144 Query: 458 TPAMYVAIQAVLS 496 PA+ + A S Sbjct: 145 VPAVAFGVDAAFS 157 Score = 44.0 bits (99), Expect = 9e-05 Identities = 21/49 (42%), Positives = 31/49 (63%) Frame = +3 Query: 96 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 242 +V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66 >At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase family protein similar to laccase [Pinus taeda][GI:13661201], lac110 laccase, Populus trichocarpa, EMBL:PTY13773 Length = 584 Score = 33.9 bits (74), Expect = 0.095 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = -1 Query: 217 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 80 P P I P RGL +G T+ +SSPA+P + +P +ST + TS+ Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332 >At3g07870.1 68416.m00962 F-box family protein contains F-box domain Pfam:PF00646 Length = 417 Score = 26.2 bits (55), Expect(2) = 1.9 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%) Frame = -1 Query: 193 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 107 WR + T G + +SSP KP LH P+ Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85 Score = 21.8 bits (44), Expect(2) = 1.9 Identities = 8/27 (29%), Positives = 17/27 (62%) Frame = -1 Query: 382 DGVFLGGDTQLIVEGMMPNLLHVIPVS 302 DGV +GG + + E ++ ++ +P+S Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43 >At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) strong similarity to actin-related protein 8A (ARP8) [Arabidopsis thaliana] GI:21427473; contains Pfam profile PF00022: Actin; supporting cDNA gi|21427470|gb|AF507916.1| Length = 387 Score = 29.1 bits (62), Expect = 2.7 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%) Frame = +2 Query: 338 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 487 T + ++V P P++++ PL + KA+R ++ +F N PA+ QA Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240 Query: 488 VLSLYAS 508 VL+LYA+ Sbjct: 241 VLALYAA 247 >At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) strong similarity to actin-related protein 8A (ARP8) [Arabidopsis thaliana] GI:21427473; contains Pfam profile PF00022: Actin; supporting cDNA gi|21427470|gb|AF507916.1| Length = 471 Score = 29.1 bits (62), Expect = 2.7 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%) Frame = +2 Query: 338 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 487 T + ++V P P++++ PL + KA+R ++ +F N PA+ QA Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240 Query: 488 VLSLYAS 508 VL+LYA+ Sbjct: 241 VLALYAA 247 >At1g16690.2 68414.m01999 transcription factor-related similar to enhancer of polycomb (GI:11907923)[Homo sapiens] Length = 439 Score = 28.7 bits (61), Expect = 3.6 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +2 Query: 266 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427 L++KY + H I + W + +IW L+ P PV T P N REK Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227 >At1g16690.1 68414.m01998 transcription factor-related similar to enhancer of polycomb (GI:11907923)[Homo sapiens] Length = 439 Score = 28.7 bits (61), Expect = 3.6 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +2 Query: 266 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427 L++KY + H I + W + +IW L+ P PV T P N REK Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227 >At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein contains Pfam PF01422: NF-X1 type zinc finger; similar to transcriptional repressor NF-X1 (SP:Q12986) [Homo sapiens]; similar to EST gb|T21002 Length = 1188 Score = 28.7 bits (61), Expect = 3.6 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +2 Query: 506 SVVPPVSCWTPATVSSTPCP 565 S+ PP+SC TP PCP Sbjct: 644 SIPPPLSCGTPVPSCQLPCP 663 >At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (IRX3) identical to gi:5230423 Length = 1026 Score = 28.3 bits (60), Expect = 4.7 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%) Frame = +1 Query: 394 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 495 GSP+ +G + E+D D + NI+H + +H + A+ Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127 >At2g21830.1 68415.m02594 DC1 domain-containing protein contains Pfam profilePF03107: DC1 domain Length = 569 Score = 27.9 bits (59), Expect = 6.2 Identities = 18/52 (34%), Positives = 21/52 (40%) Frame = +3 Query: 468 CTSPSKPCSRCTRPSYHRYRAGLRRRCLPHRAHLRGDTHFPTPFLRLDFGRS 623 C P P S C Y + L RCL +R H P RLD+ RS Sbjct: 146 CELPLSPSSICYGCVY--CYSFLHERCLDLPTEIRHPVHLEHPLRRLDYIRS 195 >At5g06610.1 68418.m00747 expressed protein contains Pfam profile PF04788: Protein of unknown function (DUF620) Length = 368 Score = 27.5 bits (58), Expect = 8.2 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = -1 Query: 193 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 71 WR P + + A+GA P + AL +PL+ ++ +S+ + Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207 >At4g30070.1 68417.m04277 plant defensin-fusion protein, putative contains a C-terminal plant defensin domain, personal communication, Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be) Length = 129 Score = 27.5 bits (58), Expect = 8.2 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = -2 Query: 270 VRIPLCSVPHLLHKSPSVPYRPSRPDGGA 184 V +PLC + PS P P + DGGA Sbjct: 59 VGVPLCKCYYECESPPSPPAPPKKCDGGA 87 >At1g31070.2 68414.m03804 UDP-N-acetylglucosamine pyrophosphorylase-related low similarity to SP|P43123 UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) {Saccharomyces cerevisiae} Length = 505 Score = 27.5 bits (58), Expect = 8.2 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +1 Query: 421 REDDPDHVRNIQHARHVRRHPSRALAVRVRRTTGIVLDSGDGVFHTVPIY-EGIRTSP 591 RE++ V+N+ + +R L +R+ T V+ +G + H+VP+Y G+ SP Sbjct: 424 REEEFAPVKNVNGSNFDTPESARLLVLRLH--TRWVIAAGGFLTHSVPLYATGVEVSP 479 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,781,067 Number of Sequences: 28952 Number of extensions: 370698 Number of successful extensions: 1167 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 1046 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1136 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1363910256 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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