Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1298
(655 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 194 6e-50
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 193 7e-50
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 193 7e-50
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 192 2e-49
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 191 4e-49
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 191 4e-49
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 188 2e-48
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 188 2e-48
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 188 2e-48
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 174 4e-44
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 167 6e-42
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 164 4e-41
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 112 2e-25
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 95 3e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 87 1e-17
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 68 5e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 2e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 58 4e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 49 3e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.095
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 1.9
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 2.7
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 2.7
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.6
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.6
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 29 3.6
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 4.7
At2g21830.1 68415.m02594 DC1 domain-containing protein contains ... 28 6.2
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.2
At4g30070.1 68417.m04277 plant defensin-fusion protein, putative... 27 8.2
At1g31070.2 68414.m03804 UDP-N-acetylglucosamine pyrophosphoryla... 27 8.2
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 194 bits (472), Expect = 6e-50
Identities = 94/116 (81%), Positives = 96/116 (82%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFNTPAMYVAIQAVLSLYAS S P GYALPHAIL
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 193 bits (471), Expect = 7e-50
Identities = 94/116 (81%), Positives = 95/116 (81%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFNTPAMYVAIQAVLSLYAS S P GYALPHAIL
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 193 bits (471), Expect = 7e-50
Identities = 94/116 (81%), Positives = 95/116 (81%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFNTPAMYVAIQAVLSLYAS S P GYALPHAIL
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 192 bits (467), Expect = 2e-49
Identities = 93/116 (80%), Positives = 95/116 (81%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFN PAMYVAIQAVLSLYAS S P GYALPHAIL
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 191 bits (465), Expect = 4e-49
Identities = 92/116 (79%), Positives = 94/116 (81%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFN PAMYVAIQAVLSLYAS S P GYALPHAIL
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 191 bits (465), Expect = 4e-49
Identities = 92/116 (79%), Positives = 94/116 (81%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFN PAMYVAIQAVLSLYAS S P GYALPHAIL
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 188 bits (459), Expect = 2e-48
Identities = 89/116 (76%), Positives = 96/116 (82%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFN+PAMYVAIQAVLSLYAS S P G++LPHAIL
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAIL 178
Score = 106 bits (254), Expect = 1e-23
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 188 bits (459), Expect = 2e-48
Identities = 89/116 (76%), Positives = 96/116 (82%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFN+PAMYVAIQAVLSLYAS S P G++LPHAIL
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAIL 178
Score = 106 bits (254), Expect = 1e-23
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 188 bits (459), Expect = 2e-48
Identities = 89/116 (76%), Positives = 96/116 (82%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFETFN+PAMYVAIQAVLSLYAS S P G++LPHAIL
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAIL 178
Score = 106 bits (254), Expect = 1e-23
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 174 bits (424), Expect = 4e-44
Identities = 81/116 (69%), Positives = 91/116 (78%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 433
+RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMT
Sbjct: 64 RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMT 123
Query: 434 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
QIMFE+F P+MY+ IQAVLSLY+S S P GYALPHAIL
Sbjct: 124 QIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 179
Score = 102 bits (245), Expect = 2e-22
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 257
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 167 bits (406), Expect = 6e-42
Identities = 93/151 (61%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
Frame = +2
Query: 200 RDGRYGTEGLLCRR*GTEQRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 379
RDG E + G R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 380 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSST 556
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+S V VS T
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 557 PCPSTRGYALPHAILASGLWPVVTSQDYLIE 649
P GYALPH IL L + DYLIE
Sbjct: 154 -VPVYEGYALPHGILRLDLGGRDLT-DYLIE 182
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +3
Query: 96 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 254
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E +
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 164 bits (399), Expect = 4e-41
Identities = 78/114 (68%), Positives = 89/114 (78%)
Frame = +2
Query: 260 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 439
GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQI
Sbjct: 20 GILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQI 79
Query: 440 MFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAIL 601
MFETF P+MY+ +QA LSL+AS + S P G ALPHAIL
Sbjct: 80 MFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAIL 133
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 112 bits (270), Expect = 2e-25
Identities = 51/115 (44%), Positives = 70/115 (60%)
Frame = +2
Query: 248 TEQRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427
+E R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 428 MTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPH 592
M + MFE +N +++ IQAVL+LYA + + P GY+ PH
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPH 174
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +3
Query: 96 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 242
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 95.5 bits (227), Expect = 3e-20
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = +2
Query: 272 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 451
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 452 FNTPAMYVAIQAVLSLYA 505
FN P +Y+A+ +VL+L A
Sbjct: 146 FNVPGLYIAVNSVLALAA 163
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 93 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 179
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
Score = 35.1 bits (77), Expect = 0.041
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 517 TGIVLDSGDGVFHTVPIYEGIRTSPRHSCVWT--LAGRDLT 633
TG+V+D GDG H VP+ EG SC+ + +AG+D+T
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIG---SCIKSIPIAGKDVT 210
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 87.0 bits (206), Expect = 1e-17
Identities = 43/111 (38%), Positives = 65/111 (58%)
Frame = +2
Query: 281 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 460
PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK ++MFE +
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKV 153
Query: 461 PAMYVAIQAVLSLYASVVPPVSCWTPATVSSTPCPSTRGYALPHAILASGL 613
PA+++A VL+ +A+ S+T P GY L A+++S L
Sbjct: 154 PALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPL 204
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 182
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 68.1 bits (159), Expect = 5e-12
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +2
Query: 281 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 457
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 458 TPAMYVAIQAVLSLYA 505
Y + QAVLSLYA
Sbjct: 117 VSGFYASEQAVLSLYA 132
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 93 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 185
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.5 bits (145), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 254 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 182
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 58.4 bits (135), Expect = 4e-09
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Frame = +2
Query: 272 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 451
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 452 FNTPAMYVA-IQAVLSLYASVVPPVSCWTPATVSSTPCPST--RGYALPHAI 598
F ++Y+A Q+++ LY + P S +S T C G++ HA+
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDS-----ILSKTQCSLVVDCGFSFTHAV 167
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 96 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 188
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 281 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 457
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 458 TPAMYVAIQAVLS 496
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 96 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 242
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.095
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 217 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 80
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 1.9
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -1
Query: 193 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 107
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 1.9
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -1
Query: 382 DGVFLGGDTQLIVEGMMPNLLHVIPVS 302
DGV +GG + + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +2
Query: 338 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 487
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 488 VLSLYAS 508
VL+LYA+
Sbjct: 241 VLALYAA 247
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +2
Query: 338 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 487
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 488 VLSLYAS 508
VL+LYA+
Sbjct: 241 VLALYAA 247
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 266 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 266 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 506 SVVPPVSCWTPATVSSTPCP 565
S+ PP+SC TP PCP
Sbjct: 644 SIPPPLSCGTPVPSCQLPCP 663
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +1
Query: 394 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 495
GSP+ +G + E+D D + NI+H + +H + A+
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127
>At2g21830.1 68415.m02594 DC1 domain-containing protein contains
Pfam profilePF03107: DC1 domain
Length = 569
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +3
Query: 468 CTSPSKPCSRCTRPSYHRYRAGLRRRCLPHRAHLRGDTHFPTPFLRLDFGRS 623
C P P S C Y + L RCL +R H P RLD+ RS
Sbjct: 146 CELPLSPSSICYGCVY--CYSFLHERCLDLPTEIRHPVHLEHPLRRLDYIRS 195
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 193 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 71
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g30070.1 68417.m04277 plant defensin-fusion protein, putative
contains a C-terminal plant defensin domain, personal
communication, Bart Thomma
(Bart.Thomma@agr.kuleuven.ac.be)
Length = 129
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 270 VRIPLCSVPHLLHKSPSVPYRPSRPDGGA 184
V +PLC + PS P P + DGGA
Sbjct: 59 VGVPLCKCYYECESPPSPPAPPKKCDGGA 87
>At1g31070.2 68414.m03804 UDP-N-acetylglucosamine
pyrophosphorylase-related low similarity to SP|P43123
UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
{Saccharomyces cerevisiae}
Length = 505
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 421 REDDPDHVRNIQHARHVRRHPSRALAVRVRRTTGIVLDSGDGVFHTVPIY-EGIRTSP 591
RE++ V+N+ + +R L +R+ T V+ +G + H+VP+Y G+ SP
Sbjct: 424 REEEFAPVKNVNGSNFDTPESARLLVLRLH--TRWVIAAGGFLTHSVPLYATGVEVSP 479
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,781,067
Number of Sequences: 28952
Number of extensions: 370698
Number of successful extensions: 1167
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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