Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1297
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   5.5  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   5.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   9.6  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 390 MVHKINLAVEVSPLFLFEYIFL*SSFIL 473
           +V  + L V+    + FEYI L S FIL
Sbjct: 119 VVFTLLLGVDFVKEYAFEYIQLYSQFIL 146


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 390 MVHKINLAVEVSPLFLFEYIFL*SSFIL 473
           +V  + L V+    + FEYI L S FIL
Sbjct: 119 VVFTLLLGVDFVKEYAFEYIQLYSQFIL 146


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 390 MVHKINLAVEVSPLFLFEYIFL*SSFIL 473
           +V  + L V+    + FEYI L S FIL
Sbjct: 439 VVFTLLLGVDFVKEYAFEYIQLYSQFIL 466


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 132 CLRFFFCAVIFL 97
           C+ +F+CA+I L
Sbjct: 284 CIYYFYCALIIL 295


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 596 SLDFNEFK*LQALINLDLNLSHD 528
           SLDFN F  + +L    +N+SH+
Sbjct: 178 SLDFNIFDQVGSLGMFHVNMSHN 200


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 83  SCQRYKNITAQKKKRRHAL 139
           SC RY+ +   KKK  H+L
Sbjct: 208 SCARYRFMPDIKKKGLHSL 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,605
Number of Sequences: 336
Number of extensions: 2616
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)