BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1297 (694 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 22 5.5 AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 22 5.5 AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 22 5.5 AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 7.2 AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 21 7.2 EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate 1-deca... 21 9.6 >AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor candidate 62 protein. Length = 320 Score = 21.8 bits (44), Expect = 5.5 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 390 MVHKINLAVEVSPLFLFEYIFL*SSFIL 473 +V + L V+ + FEYI L S FIL Sbjct: 119 VVFTLLLGVDFVKEYAFEYIQLYSQFIL 146 >AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor candidate 37 protein. Length = 331 Score = 21.8 bits (44), Expect = 5.5 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 390 MVHKINLAVEVSPLFLFEYIFL*SSFIL 473 +V + L V+ + FEYI L S FIL Sbjct: 119 VVFTLLLGVDFVKEYAFEYIQLYSQFIL 146 >AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor candidate 32 protein. Length = 651 Score = 21.8 bits (44), Expect = 5.5 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 390 MVHKINLAVEVSPLFLFEYIFL*SSFIL 473 +V + L V+ + FEYI L S FIL Sbjct: 439 VVFTLLLGVDFVKEYAFEYIQLYSQFIL 466 >AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor candidate 19 protein. Length = 355 Score = 21.4 bits (43), Expect = 7.2 Identities = 6/12 (50%), Positives = 10/12 (83%) Frame = -2 Query: 132 CLRFFFCAVIFL 97 C+ +F+CA+I L Sbjct: 284 CIYYFYCALIIL 295 >AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface protein chaoptin protein. Length = 782 Score = 21.4 bits (43), Expect = 7.2 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -3 Query: 596 SLDFNEFK*LQALINLDLNLSHD 528 SLDFN F + +L +N+SH+ Sbjct: 178 SLDFNIFDQVGSLGMFHVNMSHN 200 >EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate 1-decarboxylase protein. Length = 540 Score = 21.0 bits (42), Expect = 9.6 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +2 Query: 83 SCQRYKNITAQKKKRRHAL 139 SC RY+ + KKK H+L Sbjct: 208 SCARYRFMPDIKKKGLHSL 226 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 138,605 Number of Sequences: 336 Number of extensions: 2616 Number of successful extensions: 9 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 122,585 effective HSP length: 55 effective length of database: 104,105 effective search space used: 18218375 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -