Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1297
(694 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 3.6
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 3.6
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 22 4.8
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 22 4.8
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 4.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 4.8
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 6.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 6.4
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 396 EPLKFNMSHGNGTIHXNNYLFS 331
EP K S N TIH NNY ++
Sbjct: 77 EP-KIISSLSNNTIHNNNYKYN 97
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 396 EPLKFNMSHGNGTIHXNNYLFS 331
EP K S N TIH NNY ++
Sbjct: 77 EP-KIISSLSNNTIHNNNYKYN 97
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 396 EPLKFNMSHGNGTIHXNNYLFS 331
EP K S N TIH NNY ++
Sbjct: 78 EP-KIISSLSNNTIHNNNYKYN 98
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 396 EPLKFNMSHGNGTIHXNNYLFS 331
EP K S N TIH NNY ++
Sbjct: 78 EP-KIISSLSNNTIHNNNYKYN 98
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 396 EPLKFNMSHGNGTIHXNNYLFS 331
EP K S N TIH NNY ++
Sbjct: 78 EP-KIISSLSNNTIHNNNYKYN 98
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 396 EPLKFNMSHGNGTIHXNNYLFS 331
EP K S N TIH NNY ++
Sbjct: 78 EP-KIISSLSNNTIHNNNYKYN 98
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 503 NQLIELLSTSKNERTSKENVLEQ 435
NQ++ +L TS + K+N+L Q
Sbjct: 98 NQILHILWTSYKKVFMKDNILRQ 120
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 503 NQLIELLSTSKNERTSKENVLEQ 435
NQ++ +L TS + K+N+L Q
Sbjct: 81 NQILHILWTSYKKVFMKDNILRQ 103
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 680 FVIIXTLKWAVKVVYLSTAHPKIL 609
F I +KW KVVY ++ P L
Sbjct: 222 FCIWKGVKWTGKVVYFTSLFPYAL 245
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 680 FVIIXTLKWAVKVVYLSTAHPKIL 609
F I +KW KVVY ++ P L
Sbjct: 275 FCIWKGVKWTGKVVYFTSLFPYAL 298
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 396 EPLKFNMSHGNGTIHXNNY 340
EP K S N TIH NNY
Sbjct: 311 EP-KIISSLSNNTIHNNNY 328
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 6.4
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -3
Query: 647 KVVYLSTAHPKIL*RELSLDFNEFK*LQALINLDLNLSHDYKQLE 513
+++Y HPK L L D N K + ++ L Y LE
Sbjct: 1008 ELIYEYQIHPKTLNEVLQADMNALKNFNQPLLVNDQLGQLYLDLE 1052
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,067
Number of Sequences: 438
Number of extensions: 2929
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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