Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1292
         (646 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...   142   7e-33
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    51   2e-05
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    39   0.12 
UniRef50_UPI00006CBFBE Cluster: hypothetical protein TTHERM_0040...    36   1.1  
UniRef50_A6QUK3 Cluster: Predicted protein; n=1; Ajellomyces cap...    35   1.9  
UniRef50_UPI0000E4A923 Cluster: PREDICTED: similar to angiotensi...    34   2.6  
UniRef50_UPI0000E49F41 Cluster: PREDICTED: similar to endonuclea...    34   2.6  
UniRef50_Q0PDU8 Cluster: NBS-containing resistance-like protein;...    34   3.4  
UniRef50_Q8WS60 Cluster: Endonuclease/reverse transcriptase; n=6...    33   4.5  
UniRef50_UPI0000E46784 Cluster: PREDICTED: similar to endonuclea...    33   7.8  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score =  142 bits (344), Expect = 7e-33
 Identities = 64/72 (88%), Positives = 69/72 (95%)
 Frame = -2

Query: 504  SSRFYHRSARHRSRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSFFK 325
            +SRFYHR+ARHRSR+HPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYD SFFK
Sbjct: 901  ASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFK 960

Query: 324  PGLRRVLNGRQK 289
             GL RVL+GRQ+
Sbjct: 961  RGLWRVLSGRQR 972


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 23/32 (71%), Positives = 25/32 (78%)
 Frame = +3

Query: 549 FLLLRWVDELTVHLVLSGLLKPIGIYNVYAPP 644
           FLLLRWVDELT HLVLSG   P  +Y+V APP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSPRHLYDVNAPP 185


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 38.7 bits (86), Expect = 0.12
 Identities = 17/23 (73%), Positives = 18/23 (78%)
 Frame = -1

Query: 196 MGDGNHSPSGGPCARLPIRAIIK 128
           MGDGNHSPSG P A LP RA +K
Sbjct: 1   MGDGNHSPSGRPYASLPTRAKMK 23


>UniRef50_UPI00006CBFBE Cluster: hypothetical protein TTHERM_00408770;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00408770 - Tetrahymena thermophila SB210
          Length = 2437

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = -2

Query: 510  ELSSRFYHRSARHRSRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSF 331
            E + +FY    R+R +LH Y+  P  S  ++  +  L R  +LW  L S V+  + +K  
Sbjct: 2220 EFTIKFYQNVDRYRQKLHQYF--PRLSKVLKISKVTLARKQQLWEILRSHVYIFKKNKKI 2277

Query: 330  FK 325
             K
Sbjct: 2278 IK 2279


>UniRef50_A6QUK3 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 337

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 18/39 (46%), Positives = 21/39 (53%)
 Frame = -2

Query: 525 GIVRDELSSRFYHRSARHRSRLHPYYLEPLRSSTVRFQR 409
           GIV DE++S   H   R R RL P  LEP + S   F R
Sbjct: 256 GIVSDEVNSILLHALERGRIRLQPGALEPRQQSPTNFSR 294


>UniRef50_UPI0000E4A923 Cluster: PREDICTED: similar to angiotensin
           converting enzyme, partial; n=3; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to angiotensin
           converting enzyme, partial - Strongylocentrotus
           purpuratus
          Length = 926

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 12/19 (63%), Positives = 17/19 (89%)
 Frame = -2

Query: 417 FQRSFLPRTIRLWNELPST 361
           ++ SF PRTIR+WN+LP+T
Sbjct: 884 YKYSFYPRTIRIWNQLPAT 902


>UniRef50_UPI0000E49F41 Cluster: PREDICTED: similar to
           endonuclease/reverse transcriptase; n=3;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           endonuclease/reverse transcriptase - Strongylocentrotus
           purpuratus
          Length = 835

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -2

Query: 510 ELSSRFYHRSARH-RSRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKS 334
           ++  R Y     H R+R H +  +   + T     SF P+T + WN LPS+V   +   +
Sbjct: 761 DIDHRKYITPKTHGRTRGHDHQFQLYHTRTDVHANSFFPKTTKEWNNLPSSVISAKTTSA 820

Query: 333 F 331
           F
Sbjct: 821 F 821


>UniRef50_Q0PDU8 Cluster: NBS-containing resistance-like protein;
           n=43; rosids|Rep: NBS-containing resistance-like protein
           - Prunus serrulata
          Length = 264

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 17/35 (48%), Positives = 25/35 (71%)
 Frame = +3

Query: 177 EWLPSPMELVQQCQGQSQAI*IKVLGIMNSKRSLT 281
           E LP   ELV++C+G   AI + + G+M+SK+SLT
Sbjct: 167 ELLPIARELVEKCEGLPLAI-VALSGLMSSKKSLT 200


>UniRef50_Q8WS60 Cluster: Endonuclease/reverse transcriptase; n=6;
            Bilateria|Rep: Endonuclease/reverse transcriptase -
            Branchiostoma floridae (Florida lancelet) (Amphioxus)
          Length = 1045

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 486  RSARHRSRLHPY-YLEPLRSSTVRFQRSFLPRTIRLWNELPS 364
            R  R    +HP  Y+ P   +T R Q SF PRTI  WN LP+
Sbjct: 986  RQTRLTRNVHPLTYVIPRCRTTYR-QMSFFPRTILEWNSLPA 1026


>UniRef50_UPI0000E46784 Cluster: PREDICTED: similar to
           endonuclease/reverse transcriptase; n=1;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           endonuclease/reverse transcriptase - Strongylocentrotus
           purpuratus
          Length = 576

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 459 HPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVF 355
           H  +   +R  T  ++ +F PRTIR WN L  ++F
Sbjct: 401 HNLFFSNIRCKTDIYRLTFFPRTIRAWNLLSPSIF 435


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,362,784
Number of Sequences: 1657284
Number of extensions: 15196611
Number of successful extensions: 37269
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 36130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37262
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)