Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1292
         (646 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    25   0.53 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   3.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.8  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   6.6  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   8.7  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 47  ILLTASRSLGLSEVRWLQESMDIKTFFFYYCPYR 148
           +LL A  S+      WL  S   + FF  YCP +
Sbjct: 397 LLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPIK 430


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 438 LRSSTVRFQRSFLPRTIRLWNELPST 361
           L    VRF +     T++LW++L ST
Sbjct: 79  LEQFIVRFMKYHFFGTLKLWSQLFST 104


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 193 GDGNHSPSGGPCARL 149
           G GN+ P GGP + +
Sbjct: 530 GSGNNQPPGGPSSHV 544


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 434 GHLQCVSRGLFCH 396
           G   C+ RGLFC+
Sbjct: 125 GDGNCIERGLFCN 137


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 538 MTHFFYCLDGWTNSQS 585
           +T F+YC D   NS +
Sbjct: 248 ITQFYYCYDSGFNSDN 263


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -3

Query: 398 HVPSGFGMSSPPRCFPSAMTSPSSN 324
           H P  +    PP   PS   SP SN
Sbjct: 24  HSPEPYPPRCPPIYEPSCQYSPVSN 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,674
Number of Sequences: 336
Number of extensions: 3887
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)