Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1292
(646 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 39 0.003
SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6) 38 0.005
SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5) 38 0.009
SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 38 0.009
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 37 0.012
SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082) 37 0.012
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 37 0.012
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 37 0.012
SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1) 36 0.021
SB_25119| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.4) 36 0.028
SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30) 36 0.037
SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.065
SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 35 0.065
SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076) 35 0.065
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.065
SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34) 35 0.065
SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3) 34 0.086
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 34 0.086
SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 34 0.086
SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8) 33 0.20
SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5) 33 0.20
SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072) 33 0.20
SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8) 33 0.20
SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0) 33 0.20
SB_40765| Best HMM Match : DX (HMM E-Value=1.4) 33 0.20
SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0) 33 0.20
SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33) 32 0.46
SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7) 31 0.61
SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_19530| Best HMM Match : EMI (HMM E-Value=3.5) 31 0.61
SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5) 30 1.4
SB_36259| Best HMM Match : PHD (HMM E-Value=5.3e-05) 30 1.9
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 29 2.4
SB_22775| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_58576| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16) 28 5.7
SB_48933| Best HMM Match : Drf_FH1 (HMM E-Value=1.4) 28 5.7
SB_48902| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_40983| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_40552| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_38731| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_34180| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 28 5.7
SB_33284| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_32643| Best HMM Match : Carla_C4 (HMM E-Value=9.9) 28 5.7
SB_30890| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_29924| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 28 5.7
SB_24244| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_36764| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_36762| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_29800| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_24298| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_19305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_14496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_3787| Best HMM Match : Pentapeptide_2 (HMM E-Value=3) 28 5.7
SB_26971| Best HMM Match : Peptidase_C5 (HMM E-Value=0.13) 28 7.5
SB_31047| Best HMM Match : CHORD (HMM E-Value=6.2) 27 9.9
SB_27710| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_53051| Best HMM Match : rve (HMM E-Value=1.3e-14) 27 9.9
SB_50226| Best HMM Match : LEA_4 (HMM E-Value=0.18) 27 9.9
SB_49796| Best HMM Match : DUF293 (HMM E-Value=7.6) 27 9.9
SB_32808| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -2
Query: 477 RHRSRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSFFKPGLRRV 307
R R HP PL +S+ SF RTI WN LP+ +F E FK + R+
Sbjct: 823 RKTRRSHPESFIPLSTSSASEHLSFFSRTIIQWNNLPALLFNEPCSLPIFKDKISRL 879
>SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6)
Length = 231
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -2
Query: 459 HPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSFFKPGL 316
H + L + T ++ SFLPR +RLWN LP +V R F GL
Sbjct: 184 HSEFYTILNARTDIYKYSFLPRALRLWNNLPQSVIDMRGCPEAFHSGL 231
>SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5)
Length = 210
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -2
Query: 486 RSARHRSRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 358
RS R R YY + L+++T+ F SF R IR+WN LP+ V
Sbjct: 140 RSTRSTRRKELYYNQ-LQANTLAFNYSFFARAIRIWNLLPNDV 181
>SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -2
Query: 486 RSARHRSRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 358
RS R R YY + L+++T+ F SF R IR+WN LP+ V
Sbjct: 294 RSTRSTRRKELYYNQ-LQANTLAFNYSFFARAIRIWNLLPNDV 335
>SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -2
Query: 486 RSARHRSRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 358
RS R R YY + L+++T+ F SF R IR+WN LP+ V
Sbjct: 245 RSTRSTRRKELYYNQ-LQANTLAFNYSFFARAIRIWNLLPNDV 286
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -2
Query: 486 RSARHRSRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 358
RS R R YY + L+++T+ F SF R IR+WN LP+ V
Sbjct: 500 RSTRSTRRKELYYNQ-LQANTLAFNYSFFARAIRIWNLLPNDV 541
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -2
Query: 468 SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 358
SR H L+++ + F SF PRTIR WN LP+ V
Sbjct: 1627 SRRHSRTYHQLQANILAFNYSFFPRTIRTWNLLPAEV 1663
>SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 468 SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 358
+R H + L+S+ + + SF PR IR+WN LPS V
Sbjct: 122 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 158
>SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = -2
Query: 471 RSRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSFFKPGL 316
R++ +Y P + T ++ SFLPR +RLWN LP +V R F GL
Sbjct: 182 RTQHSEFYTIP-NARTDIYKYSFLPRALRLWNNLPQSVIDMRGCPEAFHAGL 232
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -2
Query: 468 SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 358
SR H L+++ + F SF PRTIR WN LP+ V
Sbjct: 1073 SRRHSRTYHQLQANILAFNYSFFPRTIRTWNLLPAEV 1109
>SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082)
Length = 506
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 468 SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 358
+R H + L+S+ + + SF PR IR+WN LPS V
Sbjct: 441 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 477
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 468 SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 358
+R H + L+S+ + + SF PR IR+WN LPS V
Sbjct: 1427 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 1463
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 468 SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 358
+R H + L+S+ + + SF PR IR+WN LPS V
Sbjct: 387 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 423
>SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1)
Length = 243
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = -2
Query: 471 RSRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSF 331
RSR + ++S+ + SF PRTIR WN LPS V SF
Sbjct: 177 RSRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVVESSSIDSF 223
>SB_25119| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.4)
Length = 443
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 468 SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 358
+R H + L S+ + F SF PR IR WN LP +
Sbjct: 262 TRRHSLSFQQLHSNILSFNYSFFPRAIRAWNLLPDNI 298
>SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 1280
Score = 35.5 bits (78), Expect = 0.037
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -2
Query: 486 RSARHRSRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 358
RS R +R Y L+++T+ F SF R IR+WN LP+ V
Sbjct: 1210 RSTRS-TRRKELYCNQLQANTLTFNYSFFARAIRIWNLLPNDV 1251
>SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 34.7 bits (76), Expect = 0.065
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 468 SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSF 331
SR + ++S+ + SF PRTIR WN LPS V SF
Sbjct: 853 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVIESSSIDSF 898
>SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 198
Score = 34.7 bits (76), Expect = 0.065
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 468 SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSF 331
SR + ++S+ + SF PRTIR WN LPS V SF
Sbjct: 133 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVIESSSIDSF 178
>SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)
Length = 888
Score = 34.7 bits (76), Expect = 0.065
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -2
Query: 459 HPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERY 343
HP + + + T F+ SF+PR IRLWN L TV Y
Sbjct: 730 HPEHYDIPYARTNIFKYSFVPRAIRLWNSLEVTVVLAAY 768
>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 34.7 bits (76), Expect = 0.065
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 468 SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSF 331
SR + ++S+ + SF PRTIR WN LPS V SF
Sbjct: 544 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVIESSSIDSF 589
>SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)
Length = 837
Score = 34.7 bits (76), Expect = 0.065
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 468 SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSF 331
SR + ++S+ + SF PRTIR WN LPS V SF
Sbjct: 772 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVIESSSIDSF 817
>SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3)
Length = 243
Score = 34.3 bits (75), Expect = 0.086
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 468 SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSF 331
SR + ++S+ + SF PRTIR WN LPS V SF
Sbjct: 178 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVVESSSIDSF 223
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 34.3 bits (75), Expect = 0.086
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 468 SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSF 331
SR + ++S+ + SF PRTIR WN LPS V SF
Sbjct: 440 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVVESSSIDSF 485
>SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 152
Score = 34.3 bits (75), Expect = 0.086
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 468 SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSF 331
SR + ++S+ + SF PRTIR WN LPS V SF
Sbjct: 87 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVVESSSIDSF 132
>SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 174
Score = 33.1 bits (72), Expect = 0.20
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -2
Query: 489 HRSARHR-SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSFFKPGLR 313
H+ R R S YY E +++ ++ SF PRTIR WN LP+ + E FK L
Sbjct: 110 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDLE 166
Query: 312 RVLNGRQ 292
LN +
Sbjct: 167 IYLNNNK 173
>SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5)
Length = 284
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -2
Query: 468 SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSF 331
SR + ++S+ + SF PRTIR WN LP+ V SF
Sbjct: 219 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPAQVVESSSIDSF 264
>SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072)
Length = 375
Score = 33.1 bits (72), Expect = 0.20
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -2
Query: 489 HRSARHR-SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSFFKPGLR 313
H+ R R S YY E +++ ++ SF PRTIR WN LP+ + E FK L
Sbjct: 311 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDLE 367
Query: 312 RVLNGRQ 292
LN +
Sbjct: 368 IYLNNNK 374
>SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 361
Score = 33.1 bits (72), Expect = 0.20
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -2
Query: 489 HRSARHR-SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSFFKPGLR 313
H+ R R S YY E +++ ++ SF PRTIR WN LP+ + E FK L
Sbjct: 297 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDLE 353
Query: 312 RVLNGRQ 292
LN +
Sbjct: 354 IYLNNNK 360
>SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 581
Score = 33.1 bits (72), Expect = 0.20
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -2
Query: 489 HRSARHR-SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSFFKPGLR 313
H+ R R S YY E +++ ++ SF PRTIR WN LP+ + E FK L
Sbjct: 517 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDLE 573
Query: 312 RVLNGRQ 292
LN +
Sbjct: 574 IYLNNNK 580
>SB_40765| Best HMM Match : DX (HMM E-Value=1.4)
Length = 278
Score = 33.1 bits (72), Expect = 0.20
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -2
Query: 489 HRSARHR-SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSFFKPGLR 313
H+ R R S YY E +++ ++ SF PRTIR WN LP+ + E FK L
Sbjct: 214 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELDSIEHFKRDLE 270
Query: 312 RVLNGRQ 292
LN +
Sbjct: 271 IYLNNNK 277
>SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 666
Score = 33.1 bits (72), Expect = 0.20
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -2
Query: 489 HRSARHR-SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSFFKPGLR 313
H+ R R S YY E +++ ++ SF PRTIR WN LP+ + E FK L
Sbjct: 602 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDLE 658
Query: 312 RVLNGRQ 292
LN +
Sbjct: 659 IYLNNNK 665
>SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -2
Query: 468 SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFP 352
S + Y L + F SF RTI +WN LP VFP
Sbjct: 809 SACNSYQFSLLPAKINAFLFSFYSRTIPVWNALPQAVFP 847
>SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33)
Length = 609
Score = 31.9 bits (69), Expect = 0.46
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -2
Query: 489 HRSARHR-SRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPS 364
H+ R R S YY E +++ ++ SF PRTIR WN LP+
Sbjct: 543 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPN 583
>SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 792
Score = 31.9 bits (69), Expect = 0.46
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 417 FQRSFLPRTIRLWNELPS 364
++ S+ PRT++LWN LPS
Sbjct: 746 YRNSYFPRTVKLWNSLPS 763
>SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 31.9 bits (69), Expect = 0.46
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = -2
Query: 489 HRSARHRSRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDKSFFKPGLRR 310
H+ R R+ H + +++ ++ SF PRTIR WN LP+ + E FK L
Sbjct: 760 HQDLRTRNS-HNFKCYQEKATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDLEI 817
Query: 309 VLNGRQ 292
LN +
Sbjct: 818 YLNNNK 823
>SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 31.9 bits (69), Expect = 0.46
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 417 FQRSFLPRTIRLWNELPS 364
++ S+ PRT++LWN LPS
Sbjct: 249 YRNSYFPRTVKLWNSLPS 266
>SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 31.9 bits (69), Expect = 0.46
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 417 FQRSFLPRTIRLWNELPS 364
++ S+ PRT++LWN LPS
Sbjct: 249 YRNSYFPRTVKLWNSLPS 266
>SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7)
Length = 282
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWNELPSTV 358
L+S+ + + SF R IR+WN LPS V
Sbjct: 227 LQSNILSYNYSFFARAIRIWNLLPSNV 253
>SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 459 HPYYLEPLRSSTVRFQRSFLPRTIRLWNELP-STV 358
HP + T F+ SF P IR+WN LP ST+
Sbjct: 616 HPQRFALVSCKTNVFKESFFPHAIRMWNGLPVSTI 650
>SB_19530| Best HMM Match : EMI (HMM E-Value=3.5)
Length = 244
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 459 HPYYLEPLRSSTVRFQRSFLPRTIRLWNELP-STV 358
HP + T F+ SF P IR+WN LP ST+
Sbjct: 198 HPQRFALVSCKTNVFKESFFPHAIRMWNGLPVSTI 232
>SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -2
Query: 486 RSARHRSRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELP 367
R R HP L T F+ SF RTI+ WN+LP
Sbjct: 345 RRTRQLRSSHPDKFIELCPRTEAFKNSFFCRTIKEWNKLP 384
>SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5)
Length = 294
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 486 RSARHRSRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELP 367
R R HP L +T ++ SF RTI+ WN+LP
Sbjct: 236 RRTRQLRSSHPDKFIELCPTTEAYKNSFFCRTIKEWNKLP 275
>SB_36259| Best HMM Match : PHD (HMM E-Value=5.3e-05)
Length = 790
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 408 SFLPRTIRLWNELPSTVFPE-RYDKSFFKPGLRRV 307
SF P +I+ WN LP+T R ++SF P R+
Sbjct: 752 SFFPWSIKFWNNLPATALKSTRVNQSFLIPSDFRI 786
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -2
Query: 486 RSARHRSRLHPYYLEPLRSSTVRFQRSFLPRTIRLWNELP 367
R+ + RS L ++E L T ++ SF RTI+ WN+LP
Sbjct: 643 RTRQLRSSLPDKFIE-LCPRTEAYKNSFFCRTIKEWNKLP 681
>SB_22775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFDMSFIPRTIRTWN 124
>SB_58576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16)
Length = 453
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 398 LQANVNAFGMSFIPRTIRTWN 418
>SB_48933| Best HMM Match : Drf_FH1 (HMM E-Value=1.4)
Length = 611
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 444 LDSMDEVYSGGGRCDGKNEMIVHLEQFLMNVNDAFFLLLRWVDELTVHL 590
L D V +G G+CD + +L FLM + + L + +D+ V++
Sbjct: 295 LQEQDVVLAGDGQCDSQGFSAKNLCYFLMEIVTGYILEVEIMDKRHVNM 343
>SB_48902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_40983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_40552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_38731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_34180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 467 LQANVNAFGMSFIPRTIRTWN 487
>SB_33284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 208 LQANVNAFGMSFIPRTIRTWN 228
>SB_32643| Best HMM Match : Carla_C4 (HMM E-Value=9.9)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_30890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_29924| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 837 LQANVNAFGMSFIPRTIRTWN 857
>SB_24244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 442 LQANVNAFGMSFIPRTIRTWN 462
>SB_36764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_36762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_29800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_24298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_19305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_14496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 438 LRSSTVRFQRSFLPRTIRLWN 376
L+++ F SF+PRTIR WN
Sbjct: 55 LQANVNAFGMSFIPRTIRTWN 75
>SB_3787| Best HMM Match : Pentapeptide_2 (HMM E-Value=3)
Length = 324
Score = 28.3 bits (60), Expect = 5.7
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 363 WRGAHSKAGWYV 398
WRGAH + GWY+
Sbjct: 73 WRGAHFREGWYI 84
>SB_26971| Best HMM Match : Peptidase_C5 (HMM E-Value=0.13)
Length = 553
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -2
Query: 519 VRDELSSRFY--HRSARHRS--RLHPYYLEPLRSSTVRFQRSFLPRTIR 385
+ D L ++F H+ HR +LHP +L + T R + F+PR +R
Sbjct: 422 MNDRLVTQFTDAHKPYDHRGGDKLHPLHLATVCQKTKRRNQMFMPRIMR 470
>SB_31047| Best HMM Match : CHORD (HMM E-Value=6.2)
Length = 251
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 450 YLEPLRSSTVRFQRSFLPRTIRLWNELP 367
Y P S+ ++SF P TIR WN LP
Sbjct: 203 YKVPPSSTDYHKKKSFFPPTIRDWNCLP 230
>SB_27710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 326 LKKDLS*RSGNTVEGSSFQSRMVRGKKDL-WKRTVD 430
LK+ + T EGS FQ +V GKK+ W+ T+D
Sbjct: 26 LKESID-EDSTTSEGSKFQVLIVLGKKEYEWESTLD 60
>SB_53051| Best HMM Match : rve (HMM E-Value=1.3e-14)
Length = 1624
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 286 SLLPTVKYSPQAWFEEGLVIALGKHRGGELIPKPDGTWQKRP 411
S+ T+ P F +GL I+ G+ +GG P P G +RP
Sbjct: 615 SVRVTIDGMPNKVFSQGLRISGGRRKGGSSTP-PRGCTAQRP 655
>SB_50226| Best HMM Match : LEA_4 (HMM E-Value=0.18)
Length = 760
Score = 27.5 bits (58), Expect = 9.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 379 PKPDGTWQKRPLETHCR 429
P DG WQ+R ++ HC+
Sbjct: 81 PVADGYWQRRVIQVHCK 97
>SB_49796| Best HMM Match : DUF293 (HMM E-Value=7.6)
Length = 542
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 444 LDSMDEVYSGGGRCDGKNEMIVHLEQFLMNVNDAFFLLLRWVDELTVHL 590
L D V +G G+CD +L FLM + + L + +D+ V++
Sbjct: 226 LQEQDVVLAGDGQCDSPGFSAKNLCYFLMEIVTGYILEVEIMDKRHVNM 274
>SB_32808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -3
Query: 488 IAAPATGVDFIHTI*SHYGHLQCVSRGLFCHVPSGFGMSSPPRCFPS 348
+ AP G+D S+Y C GLFC V FG RC P+
Sbjct: 48 LCAPKRGIDQSCNF-SNYHGCGCQD-GLFCQVAKCFGTYKYYRCLPA 92
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,954,615
Number of Sequences: 59808
Number of extensions: 471126
Number of successful extensions: 1396
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 1304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -