Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1291
(679 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 157 1e-38
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 157 1e-38
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 156 2e-38
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 154 5e-38
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 5e-33
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 128 3e-30
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 84 1e-16
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 84 1e-16
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 83 2e-16
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 5e-16
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 5e-16
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 6e-16
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 81 8e-16
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 6e-15
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 8e-15
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 71 7e-13
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 67 1e-11
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 66 3e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 56 2e-08
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 55 5e-08
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 50 1e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 40 0.001
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 38 0.007
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 34 0.092
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 33 0.21
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 1.1
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.6
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 4.6
SB_33458| Best HMM Match : HEAT (HMM E-Value=7.9e-15) 28 8.0
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 157 bits (380), Expect = 1e-38
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433
LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 124
Query: 434 ESCDCLQGFQL 466
ESCDCLQGFQL
Sbjct: 125 ESCDCLQGFQL 135
Score = 138 bits (333), Expect = 5e-33
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 243 PRAI 254
PRAI
Sbjct: 61 PRAI 64
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/56 (69%), Positives = 43/56 (76%)
Frame = +1
Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAHFQFIN*LKTQTKPTCID 669
G LLISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNA ++ + CID
Sbjct: 148 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 203
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 157 bits (380), Expect = 1e-38
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433
LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA
Sbjct: 278 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 337
Query: 434 ESCDCLQGFQL 466
ESCDCLQGFQL
Sbjct: 338 ESCDCLQGFQL 348
Score = 142 bits (345), Expect = 2e-34
Identities = 63/73 (86%), Positives = 67/73 (91%)
Frame = +3
Query: 36 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 215
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 216 NEASGGKYVPRAI 254
NEA+GGKYVPRA+
Sbjct: 265 NEATGGKYVPRAV 277
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/56 (69%), Positives = 43/56 (76%)
Frame = +1
Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAHFQFIN*LKTQTKPTCID 669
G LLISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNA ++ + CID
Sbjct: 361 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 416
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 156 bits (378), Expect = 2e-38
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433
LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA
Sbjct: 10 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 69
Query: 434 ESCDCLQGFQL 466
ESCDC+QGFQL
Sbjct: 70 ESCDCIQGFQL 80
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = +1
Query: 508 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAHFQFIN*LKTQTKPTCID 669
LLI KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNA ++ + CID
Sbjct: 95 LLILKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 148
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 154 bits (374), Expect = 5e-38
Identities = 68/71 (95%), Positives = 71/71 (100%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433
L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEA
Sbjct: 65 LIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEA 124
Query: 434 ESCDCLQGFQL 466
ESCDC+QGFQL
Sbjct: 125 ESCDCIQGFQL 135
Score = 134 bits (323), Expect = 8e-32
Identities = 57/64 (89%), Positives = 62/64 (96%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 243 PRAI 254
PR++
Sbjct: 61 PRSV 64
Score = 80.2 bits (189), Expect = 1e-15
Identities = 38/56 (67%), Positives = 43/56 (76%)
Frame = +1
Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAHFQFIN*LKTQTKPTCID 669
G LLISKIREEYPDRIMNT+S+VPSPKVSDTVVEPYNA ++ + CID
Sbjct: 148 GTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 203
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 138 bits (333), Expect = 5e-33
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 243 PRAI 254
PRAI
Sbjct: 61 PRAI 64
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVF 337
LVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 128 bits (310), Expect = 3e-30
Identities = 54/71 (76%), Positives = 63/71 (88%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433
LVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+RKEA
Sbjct: 21 LVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEA 80
Query: 434 ESCDCLQGFQL 466
E+CDC+QG QL
Sbjct: 81 ENCDCMQGVQL 91
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = +1
Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKV 585
G L++SKIREEYPDRI++ +SVVPSPKV
Sbjct: 104 GTLILSKIREEYPDRILSAFSVVPSPKV 131
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/68 (54%), Positives = 48/68 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD +RK A+
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 127
Query: 437 SCDCLQGF 460
C LQGF
Sbjct: 128 QCTGLQGF 135
Score = 83.4 bits (197), Expect = 2e-16
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+
Sbjct: 501 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 560
Query: 437 SCDCLQGF 460
C LQGF
Sbjct: 561 QCTGLQGF 568
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 237 YVPRAI 254
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 240 VPRAI 254
VPRA+
Sbjct: 495 VPRAV 499
Score = 34.7 bits (76), Expect = 0.070
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 499 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
+ LL+ ++ +Y + +++ P+P+VS VVEPYN+
Sbjct: 149 FSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 187
Score = 34.7 bits (76), Expect = 0.070
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 499 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
+ LL+ ++ +Y + +++ P+P+VS VVEPYN+
Sbjct: 582 FSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 620
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 83.8 bits (198), Expect = 1e-16
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+
Sbjct: 653 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 712
Query: 437 SCDCLQGF 460
C LQGF
Sbjct: 713 QCTGLQGF 720
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+
Sbjct: 132 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 191
Query: 437 SCDCLQGF 460
C LQGF
Sbjct: 192 QCTGLQGF 199
Score = 54.8 bits (126), Expect = 6e-08
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 237 YVPRAI 254
+VPRA+
Sbjct: 646 HVPRAV 651
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 240 VPRAI 254
VPRA+
Sbjct: 574 VPRAV 578
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 240 VPRAI 254
VPRA+
Sbjct: 126 VPRAV 130
Score = 34.7 bits (76), Expect = 0.070
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 499 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
+ LL+ ++ +Y + +++ P+P+VS VVEPYN+
Sbjct: 734 FSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 772
Score = 34.3 bits (75), Expect = 0.092
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 499 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
+ LL+ ++ +Y + +++ P+P++S VVEPYN+
Sbjct: 213 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNS 251
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+
Sbjct: 67 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLAD 126
Query: 437 SCDCLQGF 460
C LQGF
Sbjct: 127 QCTGLQGF 134
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 240 VPRAI 254
VPRA+
Sbjct: 61 VPRAV 65
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 508 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
LL+ ++ +Y + +++ P+P+VS VVEPYN+
Sbjct: 151 LLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 186
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 81.8 bits (193), Expect = 5e-16
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +2
Query: 260 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAES 439
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD +RK A+
Sbjct: 69 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRKLADG 128
Query: 440 CDCLQGF 460
C LQGF
Sbjct: 129 CTGLQGF 135
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 237 YVPRAISSTWSP 272
+VPRA+ P
Sbjct: 61 HVPRAVFCDLEP 72
Score = 34.3 bits (75), Expect = 0.092
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 499 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
+ LL+ ++ +Y + +++ P+P++S VVEPYN+
Sbjct: 149 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNS 187
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 81.8 bits (193), Expect = 5e-16
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD +RK A+
Sbjct: 486 VDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRKLAD 545
Query: 437 SCDCLQGF 460
C LQGF
Sbjct: 546 QCSGLQGF 553
Score = 78.6 bits (185), Expect = 4e-15
Identities = 33/67 (49%), Positives = 47/67 (70%)
Frame = +2
Query: 260 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAES 439
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK A+
Sbjct: 54 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQ 113
Query: 440 CDCLQGF 460
C LQGF
Sbjct: 114 CTGLQGF 120
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 240 VPRAISSTWSPA 275
VPRA+ P+
Sbjct: 480 VPRAVFVDLEPS 491
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 108 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAISSTWSP 272
+G WE+ EHGI P G D + + N +++E GK+VPRA+ P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57
Score = 34.3 bits (75), Expect = 0.092
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 499 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
+ LL+ ++ +Y + +++ P+P++S VVEPYN+
Sbjct: 134 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNS 172
Score = 34.3 bits (75), Expect = 0.092
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 499 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
+ LL+ ++ +Y + +++ P+P++S VVEPYN+
Sbjct: 567 FSALLLERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNS 605
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 81.4 bits (192), Expect = 6e-16
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +2
Query: 260 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAES 439
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+
Sbjct: 873 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRKLADQ 932
Query: 440 CDCLQGF 460
C LQGF
Sbjct: 933 CTGLQGF 939
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/68 (51%), Positives = 47/68 (69%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD +RK A+
Sbjct: 439 VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRKLAD 498
Query: 437 SCDCLQGF 460
C LQGF
Sbjct: 499 GCTGLQGF 506
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 240 VPRAISSTWSP 272
VPRA+ + P
Sbjct: 866 VPRAVFADLEP 876
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 240 VPRAI 254
VPRA+
Sbjct: 433 VPRAV 437
Score = 33.5 bits (73), Expect = 0.16
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 508 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
LL+ ++ +Y + +++ P+P++S VVEPYN+
Sbjct: 956 LLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNS 991
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 508 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
LL+ ++ +Y + +++ P+P +S VVEPYN+
Sbjct: 523 LLMERLSVDYGKKSKLEFAIYPAPHISSAVVEPYNS 558
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 81.0 bits (191), Expect = 8e-16
Identities = 35/68 (51%), Positives = 47/68 (69%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD RK A+
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLAD 127
Query: 437 SCDCLQGF 460
C LQGF
Sbjct: 128 QCTGLQGF 135
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 237 YVPRAI 254
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 34.3 bits (75), Expect = 0.092
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 499 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
+ LL+ ++ +Y + +++ P+P++S VVEPYN+
Sbjct: 149 FASLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNS 187
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 78.2 bits (184), Expect = 6e-15
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+
Sbjct: 33 VDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLAD 92
Query: 437 SCDCLQGF 460
C LQGF
Sbjct: 93 QCTGLQGF 100
Score = 34.7 bits (76), Expect = 0.070
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 499 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
+ LL+ ++ +Y + ++V P+P++S VVEPYN+
Sbjct: 114 FSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNS 152
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 77.8 bits (183), Expect = 8e-15
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433
LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+V+ V+D +RK
Sbjct: 978 LVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMT 1037
Query: 434 ESCDCLQGF 460
+ C LQGF
Sbjct: 1038 DQCSGLQGF 1046
Score = 31.1 bits (67), Expect = 0.86
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 499 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
+ L+ + +Y + ++V P+P +S VVEPYN+
Sbjct: 1060 FASLITEHLSVDYGKKSKLEFAVYPAPHISTAVVEPYNS 1098
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 73.7 bits (173), Expect = 1e-13
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +2
Query: 281 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 460
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Score = 34.3 bits (75), Expect = 0.092
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 499 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
+ LL+ ++ +Y + +++ P+P++S VVEPYN+
Sbjct: 86 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNS 124
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 71.3 bits (167), Expect = 7e-13
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = +2
Query: 287 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 460
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
Score = 34.3 bits (75), Expect = 0.092
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 499 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
+ LL+ ++ +Y + +++ P+P++S VVEPYN+
Sbjct: 74 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNS 112
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +2
Query: 341 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 466
Q+ A NNWAKG YTEGAEL+DS +D +RK AE+CD +QGFQ+
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQI 43
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +1
Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAHFQFIN*LKTQTKPTCID 669
G LL+SKIREEYPDR+++++ V+PSP VS+TV EPYNA F + CID
Sbjct: 56 GSLLLSKIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQLVDVADAAICID 111
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 65.7 bits (153), Expect = 3e-11
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = +2
Query: 287 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 460
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
Score = 34.7 bits (76), Expect = 0.070
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 499 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
+ LL+ ++ +Y + ++V P+P++S VVEPYN+
Sbjct: 74 FSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNS 112
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 287 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 427
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 236
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 237 YVPRAISSTWSPA 275
+VPRA+ P+
Sbjct: 61 HVPRAVFVDLEPS 73
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +2
Query: 320 PDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 460
P+ + G+ A NN+A+GHYT G + VD VLD +RK A+ C LQGF
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGF 125
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 237 YVPRAISSTWSPAPWTLS 290
+VPRA+ P LS
Sbjct: 61 HVPRAVFVDLEPTVVALS 78
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1
Query: 499 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
+ LL+ ++ +Y + ++V P+P ++ VVEPYN+
Sbjct: 139 FSSLLMERLSVDYGKKSKLEFAVYPAPHIASAVVEPYNS 177
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/38 (60%), Positives = 32/38 (84%)
Frame = +1
Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
G L++ ++EEYPDRI+++ SV PSP+VS+ VVEPYNA
Sbjct: 29 GTLILYHLQEEYPDRILSSVSVFPSPRVSEIVVEPYNA 66
Score = 31.5 bits (68), Expect = 0.65
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 419 VRKEAESCDCLQGFQL 466
+RKEAE CD +QGFQL
Sbjct: 1 MRKEAEDCDAIQGFQL 16
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 287 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 427
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 320 PDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 460
P F Q G+GNNWA G G + +D VLD+V++E E CD L GF
Sbjct: 94 PKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGF 141
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 72 IVHIQAGQCGNQIGAKFWEIISDE 143
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 230
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 231 GKY 239
GK+
Sbjct: 254 GKH 256
Score = 35.9 bits (79), Expect = 0.030
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 499 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
+ LL+ ++ +Y R ++V P+P++S VVEPYN+
Sbjct: 280 FSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVEPYNS 318
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 120 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 221
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +2
Query: 257 VDLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLD 415
VD E + S R G GQ R N + G+ G GNN+A G++ G L+ +D
Sbjct: 44 VDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMD 102
Query: 416 VVRKEAESCDCLQG 457
+RKE E CD G
Sbjct: 103 AMRKEVERCDSFAG 116
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 230 RQVRAPRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 364
+ ++A L+D+E G ++++ GP +F + SG GNNW
Sbjct: 71 KSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 34.3 bits (75), Expect = 0.092
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 499 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615
+ LL+ ++ +Y + +++ P+P++S VVEPYN+
Sbjct: 24 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNS 62
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -1
Query: 457 SLEAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADRVH 278
S++A R R +S V I +L V++L PV+ G +++D V + RSR R H
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
Query: 277 GAGL 266
G+
Sbjct: 264 RCGI 267
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 438 DSASFRTTSKTESTSSAPSV*CPLAQL 358
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 29.1 bits (62), Expect = 3.5
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +1
Query: 514 ISKIREEYPDRIMNTYSVVPSPKVS 588
+ K++E+YPD I++++ + P K S
Sbjct: 484 LKKLQEQYPDHILSSFELFPCEKAS 508
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 351 APDCPKTKLSGRKICPKGPERTESMVPGSKST 256
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_33458| Best HMM Match : HEAT (HMM E-Value=7.9e-15)
Length = 875
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 451 PGIPTDTLARRRHRFRYGHLLISKIREEYPDRIMNTYSVVPSPKV 585
P +P D L R R R+ L+ +RE Y ++ Y+ + S +
Sbjct: 531 PTLPEDFLYPLRLRKRFSSALMKTVREFYSKEVVGIYTHIKSAAI 575
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -1
Query: 451 EAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADR 284
E T R S ++ ++ELS ++ + + A G S DE+ R D + + +R
Sbjct: 589 EEATTLRVQSQELRASLEELSQVKTKEINTLRAELGKSRDEIARKNDREKNALRER 644
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,102,325
Number of Sequences: 59808
Number of extensions: 418666
Number of successful extensions: 1268
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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