BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1291 (679 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 151 3e-37 At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 151 3e-37 At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 151 3e-37 At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 151 4e-37 At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 150 1e-36 At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 149 2e-36 At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 148 3e-36 At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 148 3e-36 At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 147 5e-36 At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 82 4e-16 At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 82 4e-16 At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 81 7e-16 At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 81 7e-16 At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 81 7e-16 At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 81 7e-16 At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 79 3e-15 At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 59 2e-09 At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 59 2e-09 At4g37190.1 68417.m05265 expressed protein 32 0.30 At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 0.93 At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein si... 30 1.6 At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 29 3.7 At1g63020.1 68414.m07117 DNA-directed RNA polymerase alpha subun... 29 3.7 At4g36610.1 68417.m05196 hydrolase, alpha/beta fold family prote... 28 6.5 At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 28 6.5 At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 8.6 >At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis thaliana}; supporting cDNA gi|15451225|gb|AY054693.1| Length = 449 Score = 151 bits (367), Expect = 3e-37 Identities = 66/71 (92%), Positives = 71/71 (100%) Frame = +2 Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433 L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEA Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124 Query: 434 ESCDCLQGFQL 466 E+CDCLQGFQ+ Sbjct: 125 ENCDCLQGFQV 135 Score = 116 bits (279), Expect = 1e-26 Identities = 49/70 (70%), Positives = 58/70 (82%) Frame = +3 Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242 MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60 Query: 243 PRAISSTWSP 272 PRA+ P Sbjct: 61 PRAVLMDLEP 70 Score = 70.9 bits (166), Expect = 7e-13 Identities = 33/38 (86%), Positives = 35/38 (92%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615 G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNA Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185 >At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis thaliana} Length = 444 Score = 151 bits (367), Expect = 3e-37 Identities = 66/71 (92%), Positives = 71/71 (100%) Frame = +2 Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433 L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEA Sbjct: 65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124 Query: 434 ESCDCLQGFQL 466 E+CDCLQGFQ+ Sbjct: 125 ENCDCLQGFQV 135 Score = 119 bits (286), Expect = 2e-27 Identities = 53/70 (75%), Positives = 58/70 (82%) Frame = +3 Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242 MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60 Query: 243 PRAISSTWSP 272 PRA+ P Sbjct: 61 PRAVLMDLEP 70 Score = 71.3 bits (167), Expect = 5e-13 Identities = 33/38 (86%), Positives = 35/38 (92%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615 G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNA Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 185 >At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis thaliana} Length = 449 Score = 151 bits (367), Expect = 3e-37 Identities = 66/71 (92%), Positives = 71/71 (100%) Frame = +2 Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433 L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEA Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124 Query: 434 ESCDCLQGFQL 466 E+CDCLQGFQ+ Sbjct: 125 ENCDCLQGFQV 135 Score = 116 bits (280), Expect = 1e-26 Identities = 50/70 (71%), Positives = 59/70 (84%) Frame = +3 Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242 MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60 Query: 243 PRAISSTWSP 272 PRA+ P Sbjct: 61 PRAVLMDLEP 70 Score = 71.3 bits (167), Expect = 5e-13 Identities = 33/38 (86%), Positives = 35/38 (92%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615 G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNA Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 185 >At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis thaliana} Length = 449 Score = 151 bits (366), Expect = 4e-37 Identities = 65/71 (91%), Positives = 71/71 (100%) Frame = +2 Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433 L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEA Sbjct: 66 LMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 125 Query: 434 ESCDCLQGFQL 466 E+CDCLQGFQ+ Sbjct: 126 ENCDCLQGFQV 136 Score = 121 bits (291), Expect = 5e-28 Identities = 54/71 (76%), Positives = 60/71 (84%), Gaps = 1/71 (1%) Frame = +3 Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 239 MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60 Query: 240 VPRAISSTWSP 272 VPRA+ P Sbjct: 61 VPRAVLMDLEP 71 Score = 70.9 bits (166), Expect = 7e-13 Identities = 33/38 (86%), Positives = 35/38 (92%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615 G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNA Sbjct: 149 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 186 >At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} Length = 447 Score = 150 bits (363), Expect = 1e-36 Identities = 64/71 (90%), Positives = 71/71 (100%) Frame = +2 Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433 L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEA Sbjct: 66 LMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 125 Query: 434 ESCDCLQGFQL 466 E+CDCLQGFQ+ Sbjct: 126 ENCDCLQGFQV 136 Score = 125 bits (302), Expect = 2e-29 Identities = 54/71 (76%), Positives = 62/71 (87%), Gaps = 1/71 (1%) Frame = +3 Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 239 MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60 Query: 240 VPRAISSTWSP 272 VPRA+ P Sbjct: 61 VPRAVLMDLEP 71 Score = 70.9 bits (166), Expect = 7e-13 Identities = 33/38 (86%), Positives = 35/38 (92%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615 G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNA Sbjct: 149 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 186 >At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis thaliana} Length = 449 Score = 149 bits (361), Expect = 2e-36 Identities = 64/71 (90%), Positives = 71/71 (100%) Frame = +2 Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433 L+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEA Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 124 Query: 434 ESCDCLQGFQL 466 E+CDCLQGFQ+ Sbjct: 125 ENCDCLQGFQV 135 Score = 123 bits (296), Expect = 1e-28 Identities = 53/70 (75%), Positives = 60/70 (85%) Frame = +3 Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242 MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60 Query: 243 PRAISSTWSP 272 PRAI P Sbjct: 61 PRAILMDLEP 70 Score = 70.9 bits (166), Expect = 7e-13 Identities = 33/38 (86%), Positives = 35/38 (92%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615 G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNA Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185 >At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} Length = 450 Score = 148 bits (359), Expect = 3e-36 Identities = 64/71 (90%), Positives = 70/71 (98%) Frame = +2 Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433 L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEA Sbjct: 65 LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124 Query: 434 ESCDCLQGFQL 466 E+CDCLQGFQ+ Sbjct: 125 ENCDCLQGFQV 135 Score = 122 bits (293), Expect = 3e-28 Identities = 53/70 (75%), Positives = 59/70 (84%) Frame = +3 Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242 MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60 Query: 243 PRAISSTWSP 272 PRA+ P Sbjct: 61 PRAVLMDLEP 70 Score = 70.9 bits (166), Expect = 7e-13 Identities = 33/38 (86%), Positives = 35/38 (92%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615 G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNA Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185 >At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} Length = 450 Score = 148 bits (359), Expect = 3e-36 Identities = 64/71 (90%), Positives = 70/71 (98%) Frame = +2 Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433 L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEA Sbjct: 65 LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124 Query: 434 ESCDCLQGFQL 466 E+CDCLQGFQ+ Sbjct: 125 ENCDCLQGFQV 135 Score = 122 bits (293), Expect = 3e-28 Identities = 53/70 (75%), Positives = 59/70 (84%) Frame = +3 Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242 MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60 Query: 243 PRAISSTWSP 272 PRA+ P Sbjct: 61 PRAVLMDLEP 70 Score = 70.9 bits (166), Expect = 7e-13 Identities = 33/38 (86%), Positives = 35/38 (92%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615 G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNA Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185 >At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis thaliana} Length = 444 Score = 147 bits (357), Expect = 5e-36 Identities = 65/71 (91%), Positives = 70/71 (98%) Frame = +2 Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433 L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEA Sbjct: 65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124 Query: 434 ESCDCLQGFQL 466 E+ DCLQGFQ+ Sbjct: 125 ENSDCLQGFQV 135 Score = 121 bits (292), Expect = 4e-28 Identities = 54/70 (77%), Positives = 59/70 (84%) Frame = +3 Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242 MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60 Query: 243 PRAISSTWSP 272 PRA+ P Sbjct: 61 PRAVLMDLEP 70 Score = 71.3 bits (167), Expect = 5e-13 Identities = 33/38 (86%), Positives = 35/38 (92%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615 G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNA Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 185 >At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} Length = 450 Score = 81.8 bits (193), Expect = 4e-16 Identities = 36/68 (52%), Positives = 48/68 (70%) Frame = +2 Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436 VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK A+ Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127 Query: 437 SCDCLQGF 460 +C LQGF Sbjct: 128 NCTGLQGF 135 Score = 60.1 bits (139), Expect = 1e-09 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%) Frame = +3 Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 236 MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60 Query: 237 YVPRAI 254 +VPRA+ Sbjct: 61 HVPRAV 66 Score = 37.1 bits (82), Expect = 0.011 Identities = 15/38 (39%), Positives = 25/38 (65%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615 G LL+ ++ +Y + +++ PSP+VS VVEPYN+ Sbjct: 150 GSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNS 187 >At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} Length = 450 Score = 81.8 bits (193), Expect = 4e-16 Identities = 36/68 (52%), Positives = 48/68 (70%) Frame = +2 Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436 VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK A+ Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127 Query: 437 SCDCLQGF 460 +C LQGF Sbjct: 128 NCTGLQGF 135 Score = 60.1 bits (139), Expect = 1e-09 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%) Frame = +3 Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 236 MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60 Query: 237 YVPRAI 254 +VPRA+ Sbjct: 61 HVPRAV 66 Score = 37.1 bits (82), Expect = 0.011 Identities = 15/38 (39%), Positives = 25/38 (65%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615 G LL+ ++ +Y + +++ PSP+VS VVEPYN+ Sbjct: 150 GSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNS 187 >At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} Length = 450 Score = 81.0 bits (191), Expect = 7e-16 Identities = 35/68 (51%), Positives = 48/68 (70%) Frame = +2 Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436 VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A+ Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127 Query: 437 SCDCLQGF 460 +C LQGF Sbjct: 128 NCTGLQGF 135 Score = 57.6 bits (133), Expect = 7e-09 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Frame = +3 Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236 MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60 Query: 237 YVPRAI 254 +VPRA+ Sbjct: 61 HVPRAV 66 Score = 37.9 bits (84), Expect = 0.006 Identities = 16/38 (42%), Positives = 26/38 (68%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615 G LL+ ++ +Y + ++V PSP+VS +VVEPYN+ Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNS 187 >At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} Length = 427 Score = 81.0 bits (191), Expect = 7e-16 Identities = 35/68 (51%), Positives = 48/68 (70%) Frame = +2 Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436 VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A+ Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127 Query: 437 SCDCLQGF 460 +C LQGF Sbjct: 128 NCTGLQGF 135 Score = 57.6 bits (133), Expect = 7e-09 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Frame = +3 Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236 MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60 Query: 237 YVPRAI 254 +VPRA+ Sbjct: 61 HVPRAV 66 Score = 37.9 bits (84), Expect = 0.006 Identities = 16/38 (42%), Positives = 26/38 (68%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615 G LL+ ++ +Y + ++V PSP+VS +VVEPYN+ Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNS 187 >At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) identical to tubulin alpha-2/alpha-4 chain SP|P29510 GB:P29510 from [Arabidopsis thaliana] Length = 450 Score = 81.0 bits (191), Expect = 7e-16 Identities = 35/68 (51%), Positives = 48/68 (70%) Frame = +2 Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436 VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A+ Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127 Query: 437 SCDCLQGF 460 +C LQGF Sbjct: 128 NCTGLQGF 135 Score = 55.2 bits (127), Expect = 4e-08 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Frame = +3 Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236 MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60 Query: 237 YVPRAI 254 +VPRA+ Sbjct: 61 HVPRAV 66 Score = 37.9 bits (84), Expect = 0.006 Identities = 16/38 (42%), Positives = 26/38 (68%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615 G LL+ ++ +Y + ++V PSP+VS +VVEPYN+ Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNS 187 >At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) nearly identical to SP:P29510 Tubulin alpha-2/alpha-4 chain from [Arabidopsis thaliana] Length = 450 Score = 81.0 bits (191), Expect = 7e-16 Identities = 35/68 (51%), Positives = 48/68 (70%) Frame = +2 Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436 VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A+ Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127 Query: 437 SCDCLQGF 460 +C LQGF Sbjct: 128 NCTGLQGF 135 Score = 55.2 bits (127), Expect = 4e-08 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Frame = +3 Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236 MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60 Query: 237 YVPRAI 254 +VPRA+ Sbjct: 61 HVPRAV 66 Score = 37.9 bits (84), Expect = 0.006 Identities = 16/38 (42%), Positives = 26/38 (68%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615 G LL+ ++ +Y + ++V PSP+VS +VVEPYN+ Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNS 187 >At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} Length = 450 Score = 79.0 bits (186), Expect = 3e-15 Identities = 33/68 (48%), Positives = 49/68 (72%) Frame = +2 Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436 +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +RK A+ Sbjct: 68 LDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLAD 127 Query: 437 SCDCLQGF 460 +C LQGF Sbjct: 128 NCTGLQGF 135 Score = 60.9 bits (141), Expect = 8e-10 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%) Frame = +3 Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 236 MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+ Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60 Query: 237 YVPRAI 254 +VPRA+ Sbjct: 61 HVPRAV 66 Score = 35.5 bits (78), Expect = 0.033 Identities = 14/38 (36%), Positives = 25/38 (65%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 615 G LL+ ++ ++ + +++ PSP+VS VVEPYN+ Sbjct: 150 GSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNS 187 >At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin (TUBG2) identical to SP|P38558 Tubulin gamma-2 chain (Gamma-2 tubulin) {Arabidopsis thaliana} Length = 474 Score = 59.3 bits (137), Expect = 2e-09 Identities = 26/63 (41%), Positives = 39/63 (61%) Frame = +3 Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 245 REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62 Query: 246 RAI 254 RA+ Sbjct: 63 RAL 65 Score = 58.8 bits (136), Expect = 3e-09 Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 2/73 (2%) Frame = +2 Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRK 427 L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ + Sbjct: 66 LIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDR 124 Query: 428 EAESCDCLQGFQL 466 EA+ D L+GF L Sbjct: 125 EADGSDSLEGFVL 137 Score = 36.3 bits (80), Expect = 0.019 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNA 615 G L+ + + Y +++ TYSV P+ + SD VV+PYN+ Sbjct: 150 GSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNS 188 >At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin (TUBG1) identical to SP|P38557 Tubulin gamma-1 chain (Gamma-1 tubulin) {Arabidopsis thaliana} Length = 474 Score = 59.3 bits (137), Expect = 2e-09 Identities = 26/63 (41%), Positives = 39/63 (61%) Frame = +3 Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 245 REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62 Query: 246 RAI 254 RA+ Sbjct: 63 RAL 65 Score = 58.4 bits (135), Expect = 4e-09 Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 2/73 (2%) Frame = +2 Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRK 427 L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ + Sbjct: 66 LIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDR 124 Query: 428 EAESCDCLQGFQL 466 EA+ D L+GF L Sbjct: 125 EADGSDSLEGFVL 137 Score = 36.3 bits (80), Expect = 0.019 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%) Frame = +1 Query: 502 GHLLISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNA 615 G L+ + + Y +++ TYSV P+ + SD VV+PYN+ Sbjct: 150 GSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNS 188 >At4g37190.1 68417.m05265 expressed protein Length = 562 Score = 32.3 bits (70), Expect = 0.30 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Frame = +3 Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 230 MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60 Query: 231 GKYVPRAISSTWSPAPWTLSA 293 Y PR +S A T+S+ Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81 >At2g31580.1 68415.m03858 expressed protein contains Pfam profile: PF04446 family of unknown function (DUF549) Length = 567 Score = 30.7 bits (66), Expect = 0.93 Identities = 14/22 (63%), Positives = 19/22 (86%) Frame = +2 Query: 395 LVDSVLDVVRKEAESCDCLQGF 460 +++SV VVRKEAE+C+CLQ F Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21 >At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] Length = 399 Score = 29.9 bits (64), Expect = 1.6 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 8/79 (10%) Frame = -3 Query: 266 PSRRDGAGHVLAAGGFI--VVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAAL 93 P R+ H++ + F+ ++ L Q V +GT GV+ + D+LP S D VA L Sbjct: 6 PLRKSPTSHMVFSSFFLSFLLVFSILSSQTAVAFIGTYGVNYGRIADNLP--SPDAVATL 63 Query: 92 ------TSLDMYDFPHFVL 54 + +YD H VL Sbjct: 64 LKSAKIRNTRIYDADHSVL 82 >At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 304 Score = 28.7 bits (61), Expect = 3.7 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -3 Query: 470 VSVGIPGGNHTIPLPFERRLKLNRRAQHPPCSVPWPSC 357 VS G+PG HT P ++ ++ +++ P S PW SC Sbjct: 136 VSSGLPGKQHTSSSPPSFVVEPSKNSKYIPSSSPW-SC 172 >At1g63020.1 68414.m07117 DNA-directed RNA polymerase alpha subunit family protein low similarity to RNA polymerase IIA largest subunit [Trypanosoma brucei] GI:162215; contains InterPro accession IPR000722: RNA polymerase, alpha subunit Length = 1453 Score = 28.7 bits (61), Expect = 3.7 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = +1 Query: 463 TDTLARRRHRFRYGHLLISKIREEYP-DRIMNTYSVVPSPKVSDTV-VEPYNAHF 621 ++ L++++H F YG L I E+ I++T ++ SP + V + P+ HF Sbjct: 930 SEYLSKKKHGFEYGSLEIKNHLEKLSFSEIVSTSMIIFSPSSNTKVPLSPWVCHF 984 >At4g36610.1 68417.m05196 hydrolase, alpha/beta fold family protein low similarity to 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase [Pseudomonas fluorescens] GI:1871461; contains Pfam profile PF00561: hydrolase, alpha/beta fold family Length = 317 Score = 27.9 bits (59), Expect = 6.5 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +1 Query: 493 FRYGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVE 603 F YG ++ KI E YPD + P ++DT+ E Sbjct: 134 FSYGGMVAFKIAEAYPDMVRAIVVSGSIPTMTDTINE 170 >At1g21850.1 68414.m02735 multi-copper oxidase type I family protein similar to pollen-specific BP10 protein [SP|Q00624][Brassica napus]; contains Pfam profile: PF00394 Multicopper oxidase Length = 551 Score = 27.9 bits (59), Expect = 6.5 Identities = 20/60 (33%), Positives = 28/60 (46%) Frame = -3 Query: 233 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 54 AAGGF + I + + ++ VP G VL+GD DL A L + FP +L Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194 >At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative similar to (1-4)-beta-mannan endohydrolase [Coffea arabica] GI:10178872, (1-4)-beta-mannan endohydrolase GB:AAB87859 [Lycopersicon esculentum]; contains Pfam profile PF00150: Cellulase (glycosyl hydrolase family 5) Length = 408 Score = 27.5 bits (58), Expect = 8.6 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +3 Query: 69 EIVHIQAGQCGNQIGAKFWEIISD 140 +I++ A + G+ GA FWE+IS+ Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,019,566 Number of Sequences: 28952 Number of extensions: 286147 Number of successful extensions: 872 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 798 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 861 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1428369392 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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