Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1290
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.2  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   1.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.1  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   8.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 102  NQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEA 224
            N+I  + W +  D  G     AYHGD  +  E I    ++A
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 7/43 (16%)
 Frame = -1

Query: 487 RRPSECVSW-------NPLEQITRFPLPFERRLKLNRRAQHPP 380
           R   EC  W         L+++   P P  R  K++RR   PP
Sbjct: 226 RNVPECADWYKGRLTDEQLKELENPPTPKPRPTKVSRRKPRPP 268


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -1

Query: 190 CKSESPW*APVGSMPC 143
           C +E PW    G  PC
Sbjct: 351 CVNERPWSLYCGEPPC 366


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -2

Query: 402 IDELSTLRECPLAQLLPAPDCPKTKLSGRKICPKGP 295
           + +L  L  C    L+     P+T + GR++C   P
Sbjct: 112 VADLMVLLVCTPTVLVEVNSRPETWVLGREMCKAVP 147


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -2

Query: 402 IDELSTLRECPLAQLLPAPDCPKTKLSGRKICPKGP 295
           + +L  L  C    L+     P+T + GR++C   P
Sbjct: 112 VADLMVLLVCTPTVLVEVNSRPETWVLGREMCKAVP 147


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 36  IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEI 131
           I +  + N+++  V I    C N   A+F+E+
Sbjct: 283 IEAKRRDNEIKMFVKIVDASCRNFTAARFFEL 314


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,589
Number of Sequences: 336
Number of extensions: 2243
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)