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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1290
         (499 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)                    142   1e-34
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)                    138   3e-33
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)             138   3e-33
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)                    134   5e-32
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)                     99   2e-21
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)               82   2e-16
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)              60   1e-09
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)                     56   1e-08
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)                     56   2e-08
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)              55   3e-08
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)                      55   3e-08
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)                      55   4e-08
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)                     54   5e-08
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)              54   7e-08
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)              54   7e-08
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)              49   2e-06
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)              48   6e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)              46   2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)               45   4e-05
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.001
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)             38   0.005
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)                   38   0.006
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.006
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)                36   0.014
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)                      36   0.014
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)           32   0.23 
SB_54925| Best HMM Match : MFS_1 (HMM E-Value=4.7e-27)                 32   0.30 
SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   0.92 
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)                29   1.6  
SB_50693| Best HMM Match : C2 (HMM E-Value=0)                          29   2.8  
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   6.5  

>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 458

 Score =  142 bits (345), Expect = 1e-34
 Identities = 63/73 (86%), Positives = 67/73 (91%)
 Frame = +3

Query: 36  IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 215
           +YSS    KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264

Query: 216 NEASGGKYVPRAI 254
           NEA+GGKYVPRA+
Sbjct: 265 NEATGGKYVPRAV 277



 Score = 99.5 bits (237), Expect = 1e-21
 Identities = 47/67 (70%), Positives = 49/67 (73%)
 Frame = +2

Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
           LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH                ++ 
Sbjct: 278 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 337

Query: 434 ESCDLLQ 454
           ESCD LQ
Sbjct: 338 ESCDCLQ 344


>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 446

 Score =  138 bits (333), Expect = 3e-33
 Identities = 60/64 (93%), Positives = 62/64 (96%)
 Frame = +3

Query: 63  MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
           MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1   MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 243 PRAI 254
           PRAI
Sbjct: 61  PRAI 64



 Score = 99.5 bits (237), Expect = 1e-21
 Identities = 47/67 (70%), Positives = 49/67 (73%)
 Frame = +2

Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
           LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH                ++ 
Sbjct: 65  LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 124

Query: 434 ESCDLLQ 454
           ESCD LQ
Sbjct: 125 ESCDCLQ 131


>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 112

 Score =  138 bits (333), Expect = 3e-33
 Identities = 60/64 (93%), Positives = 62/64 (96%)
 Frame = +3

Query: 63  MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
           MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1   MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 243 PRAI 254
           PRAI
Sbjct: 61  PRAI 64



 Score = 64.1 bits (149), Expect = 6e-11
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +2

Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVF 337
           LVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 65  LVDLEPGTMDSVRSGPFGQIFRPDNFVF 92


>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 446

 Score =  134 bits (323), Expect = 5e-32
 Identities = 57/64 (89%), Positives = 62/64 (96%)
 Frame = +3

Query: 63  MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
           MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1   MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60

Query: 243 PRAI 254
           PR++
Sbjct: 61  PRSV 64



 Score = 98.7 bits (235), Expect = 2e-21
 Identities = 45/67 (67%), Positives = 49/67 (73%)
 Frame = +2

Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
           L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH                ++ 
Sbjct: 65  LIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEA 124

Query: 434 ESCDLLQ 454
           ESCD +Q
Sbjct: 125 ESCDCIQ 131


>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 391

 Score = 98.7 bits (235), Expect = 2e-21
 Identities = 46/67 (68%), Positives = 49/67 (73%)
 Frame = +2

Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
           LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH                ++ 
Sbjct: 10  LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 69

Query: 434 ESCDLLQ 454
           ESCD +Q
Sbjct: 70  ESCDCIQ 76


>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
          Length = 144

 Score = 82.2 bits (194), Expect = 2e-16
 Identities = 37/69 (53%), Positives = 44/69 (63%)
 Frame = +2

Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
           LVDLEPGTMD+VR GP G +FRPDNFV  QSGA NNWAKGH                ++ 
Sbjct: 21  LVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEA 80

Query: 434 ESCDLLQXI 460
           E+CD +Q +
Sbjct: 81  ENCDCMQGV 89


>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 94

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = +3

Query: 63  MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 236
           MRE + +  GQ G QIG   WE+   EHGI P G    D  +    +  N +++E  GGK
Sbjct: 1   MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60

Query: 237 YVPRAISSTWSPA 275
           +VPRA+     P+
Sbjct: 61  HVPRAVFVDLEPS 73


>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 885

 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +3

Query: 63  MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
           MRE + I  GQ G QIG   WE+   EHGI P G    D  +    +  N +++E   GK
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 237 YVPRAI 254
           +VPRA+
Sbjct: 61  HVPRAV 66



 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = +3

Query: 66  REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
           RE + I  GQ G QIG   WE+   EHGI P G    D  +    +  N +++E   GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494

Query: 240 VPRAI 254
           VPRA+
Sbjct: 495 VPRAV 499



 Score = 50.4 bits (115), Expect = 8e-07
 Identities = 20/40 (50%), Positives = 28/40 (70%)
 Frame = +2

Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           VDLEP  +D VR+G + Q+F P+  V G+  A NN+A+GH
Sbjct: 68  VDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGH 107



 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 19/40 (47%), Positives = 28/40 (70%)
 Frame = +2

Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GH
Sbjct: 501 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 540


>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 536

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
 Frame = +3

Query: 63  MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
           MRE + I  GQ G QIG   WE+   EHGI P G    D       +  N +++E   GK
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60

Query: 237 YVPRAISSTWSPAPWTLS 290
           +VPRA+     P    LS
Sbjct: 61  HVPRAVFVDLEPTVVALS 78


>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 452

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
 Frame = +3

Query: 63  MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
           MRE + +  GQ G Q+G   WE+   EHGI P G    D  +    +  N +++E   GK
Sbjct: 1   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60

Query: 237 YVPRAISSTWSP 272
           +VPRA+     P
Sbjct: 61  HVPRAVFCDLEP 72



 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = +2

Query: 260 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           DLEP  +D VR+G + Q+F P+  + G+  A NN+A+GH
Sbjct: 69  DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 107


>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 451

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +3

Query: 63  MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
           MRE + I  GQ G Q+G   WE+   EHGI P G    D  +    +  N +++E   GK
Sbjct: 1   MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 237 YVPRAI 254
           +VPRA+
Sbjct: 61  HVPRAV 66



 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 19/40 (47%), Positives = 28/40 (70%)
 Frame = +2

Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GH
Sbjct: 68  VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 107


>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 1036

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +3

Query: 63  MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
           +RE + I  GQ G QIG   WE+   EHGI P G    D  +    +  N +++E   GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645

Query: 237 YVPRAI 254
           +VPRA+
Sbjct: 646 HVPRAV 651



 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = +3

Query: 66  REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
           RE + I  GQ G QIG   WE+   EHGI P G    D  +    +  N +++E   GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573

Query: 240 VPRAI 254
           VPRA+
Sbjct: 574 VPRAV 578



 Score = 54.0 bits (124), Expect = 7e-08
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = +3

Query: 66  REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
           RE + +  GQ G QIG   WE+   EHGI P G    D  +    +  N +++E   GK+
Sbjct: 66  RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125

Query: 240 VPRAI 254
           VPRA+
Sbjct: 126 VPRAV 130



 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 19/40 (47%), Positives = 28/40 (70%)
 Frame = +2

Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GH
Sbjct: 132 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 171



 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 19/40 (47%), Positives = 28/40 (70%)
 Frame = +2

Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GH
Sbjct: 653 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 692


>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 380

 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = +3

Query: 66  REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
           RE + I  GQ G QIG   WE+   EHGI P G    D  +    +  N +++E   GK+
Sbjct: 1   RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60

Query: 240 VPRAI 254
           VPRA+
Sbjct: 61  VPRAV 65



 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 19/40 (47%), Positives = 28/40 (70%)
 Frame = +2

Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GH
Sbjct: 67  VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 106


>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1231

 Score = 54.0 bits (124), Expect = 7e-08
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
 Frame = +3

Query: 66   REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
            RE + +  GQ G Q+G   WE+   EHGI P G    D  +    +  N +++E   GK+
Sbjct: 806  RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865

Query: 240  VPRAISSTWSP 272
            VPRA+ +   P
Sbjct: 866  VPRAVFADLEP 876



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = +3

Query: 66  REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
           RE + I  GQ G QIG   WE+   EHGI P G    D  +    +  N ++ E   GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432

Query: 240 VPRAI 254
           VPRA+
Sbjct: 433 VPRAV 437



 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 19/40 (47%), Positives = 28/40 (70%)
 Frame = +2

Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GH
Sbjct: 439 VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 478



 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = +2

Query: 260 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           DLEP  +D VR+G + Q+F P+  + G+  A NN+A+GH
Sbjct: 873 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 911


>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 865

 Score = 54.0 bits (124), Expect = 7e-08
 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
 Frame = +3

Query: 66  REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
           RE V I  GQ G Q+G   WE+   EHGI P G    D  +    +  N +++E   GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479

Query: 240 VPRAISSTWSPA 275
           VPRA+     P+
Sbjct: 480 VPRAVFVDLEPS 491



 Score = 50.4 bits (115), Expect = 8e-07
 Identities = 18/40 (45%), Positives = 28/40 (70%)
 Frame = +2

Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           VDLEP  +D +R+G + Q+F P+  + G+  A NN+A+GH
Sbjct: 486 VDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGH 525



 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = +2

Query: 260 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           DLEP  +D VR+G + Q+F P+  + G+  A NN+A+GH
Sbjct: 54  DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 92



 Score = 39.9 bits (89), Expect = 0.001
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +3

Query: 108 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAISSTWSP 272
           +G   WE+   EHGI P G    D  +    +  N +++E   GK+VPRA+     P
Sbjct: 1   MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57


>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 417

 Score = 48.8 bits (111), Expect = 2e-06
 Identities = 18/40 (45%), Positives = 28/40 (70%)
 Frame = +2

Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           VDLEP  +D +R+G + Q+F P+  + G+  A NN+A+GH
Sbjct: 33  VDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGH 72


>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1383

 Score = 47.6 bits (108), Expect = 6e-06
 Identities = 18/41 (43%), Positives = 28/41 (68%)
 Frame = +2

Query: 254  LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
            LVDLEP  +D VR+G +  ++ P+  + G+  A NN+A+GH
Sbjct: 978  LVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGH 1018


>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 602

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
 Frame = +3

Query: 63  MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 230
           MRE + I  GQ G QIG   WE+   EHGI P G  H  SD   +R     + +++E + 
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253

Query: 231 GKY 239
           GK+
Sbjct: 254 GKH 256


>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 38

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
 Frame = +3

Query: 120 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 221
           FWE+I++EHGIDP G      S +Q +R+NVY++E
Sbjct: 1   FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35


>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 389

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +2

Query: 281 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           D VR+G + Q+F P+  + G+  A NN+A+GH
Sbjct: 13  DEVRTGTYRQLFHPEQLITGKEDAANNYARGH 44


>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
          Length = 488

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +2

Query: 230 RQVRAPRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 364
           + ++A   L+D+E G ++++  GP   +F     +   SG GNNW
Sbjct: 71  KSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115


>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
          Length = 377

 Score = 37.5 bits (83), Expect = 0.006
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 287 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           VR+G + Q+F P+  + G+  A NN+A+GH
Sbjct: 3   VRTGTYRQLFHPEQLITGKEDAANNYARGH 32


>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 50

 Score = 37.5 bits (83), Expect = 0.006
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 287 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           VR+G + Q+F P+  + G+  A NN+A+GH
Sbjct: 3   VRTGTYRQLFHPEQLITGKEDAANNYARGH 32


>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
          Length = 149

 Score = 36.3 bits (80), Expect = 0.014
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 287 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           VR G +  +F PD  + G+  A NN+A+GH
Sbjct: 3   VRMGTYRDLFHPDQLITGKEDAANNYARGH 32


>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 365

 Score = 36.3 bits (80), Expect = 0.014
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +2

Query: 287 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
           +R+G + Q+F P+  + G+  A NN+A+GH
Sbjct: 3   IRTGTYRQLFHPEQLLSGKEDAANNYARGH 32


>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
          Length = 474

 Score = 32.3 bits (70), Expect = 0.23
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = +3

Query: 72  IVHIQAGQCGNQIGAKFWEIISDE 143
           IV +Q GQCGNQIG + +++I ++
Sbjct: 3   IVTLQLGQCGNQIGRELFDLIVED 26



 Score = 30.7 bits (66), Expect = 0.70
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +2

Query: 320 PDNFVFGQS-GAGNNWAKGHSRRVLSSSIQF*TSFERKRESCDLLQXIPTDTLARAAAPG 496
           P    F Q  G+GNNWA G S     S  +     +R+ E CD L    T  L+ A   G
Sbjct: 94  PKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGFLT-LLSLAGGTG 152

Query: 497 S 499
           S
Sbjct: 153 S 153


>SB_54925| Best HMM Match : MFS_1 (HMM E-Value=4.7e-27)
          Length = 1373

 Score = 31.9 bits (69), Expect = 0.30
 Identities = 29/114 (25%), Positives = 47/114 (41%)
 Frame = -1

Query: 496  TGCRRPSECVSWNPLEQITRFPLPFERRLKLNRRAQHPP*VSLGPVVAGAGLSEDEVVRT 317
            T  RR S  +   P+E+ T+  LP  RR       + PP VS   V A  G+     ++ 
Sbjct: 959  TKSRRRSGIIKAKPVEEFTKLKLPSRRRETKVLHLKTPPPVSPVKVQASTGMIPPPFIK- 1017

Query: 316  EDLSERSRADRVHGAGLQVDEMARGTYLPPEASL*YTLMRSNCKSESPW*APVG 155
              + + +  +      L  D+    T L P+  L  + + S  K++    A VG
Sbjct: 1018 GSIIQLTSGELKRVEDLTTDDFVHSTGLCPDLKLETSTVVSVRKNDEVGMALVG 1071


>SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 30.3 bits (65), Expect = 0.92
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = -1

Query: 499 GTGCRRPSECV--SWNPLEQITRFPLPFERRLKLN-RRAQH 386
           G GC R  +    SWNPL++    PLP +  LK++  +A H
Sbjct: 22  GVGCSRQQDGGHGSWNPLKECVTTPLPKQLALKMDGAQASH 62


>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
          Length = 210

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
           CPL ++L  P CP  K+    +CP
Sbjct: 18  CPLKEMLDTPLCPLKKMLNTPLCP 41



 Score = 29.1 bits (62), Expect = 2.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
           CPL ++L AP CP  ++    +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195



 Score = 27.9 bits (59), Expect = 4.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
           CPL ++L  P CP  ++    +CP
Sbjct: 62  CPLKEMLDTPLCPLKEMLNTPLCP 85



 Score = 27.5 bits (58), Expect = 6.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
           CPL ++L  P CP  ++    +CP
Sbjct: 51  CPLKEMLDTPLCPLKEMLDTPLCP 74



 Score = 27.5 bits (58), Expect = 6.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
           CPL ++L  P CP  ++    +CP
Sbjct: 73  CPLKEMLNTPLCPLKEMLNTPLCP 96



 Score = 27.5 bits (58), Expect = 6.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
           CPL ++L  P CP  ++    +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151



 Score = 27.5 bits (58), Expect = 6.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
           CPL ++L  P CP  ++    +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162



 Score = 27.5 bits (58), Expect = 6.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
           CPL ++L  P CP  ++    +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173



 Score = 27.1 bits (57), Expect = 8.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
           CPL ++L  P CP  ++    +CP
Sbjct: 7   CPLKEMLNTPLCPLKEMLDTPLCP 30



 Score = 27.1 bits (57), Expect = 8.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
           CPL ++L  P CP  ++    +CP
Sbjct: 29  CPLKKMLNTPLCPLKEMLNTPLCP 52



 Score = 27.1 bits (57), Expect = 8.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
           CPL ++L  P CP  ++    +CP
Sbjct: 40  CPLKEMLNTPLCPLKEMLDTPLCP 63



 Score = 27.1 bits (57), Expect = 8.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
           CPL ++L  P CP  ++    +CP
Sbjct: 161 CPLKEMLNTPLCPLKEMLDAPLCP 184


>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
          Length = 1049

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2

Query: 351 APDCPKTKLSGRKICPKGPERTESMVPGSKST 256
           A DCP ++ +GR +CP  P   +S +  +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169


>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 159

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -3

Query: 218 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPEL 117
           I VY DA++LQV  P+     G+D + V  D  EL
Sbjct: 48  ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,697,441
Number of Sequences: 59808
Number of extensions: 319159
Number of successful extensions: 866
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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