Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1290
(499 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 142 1e-34
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 138 3e-33
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 3e-33
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 134 5e-32
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 99 2e-21
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 82 2e-16
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 56 1e-08
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 56 2e-08
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-08
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 55 3e-08
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 55 4e-08
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 54 5e-08
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 38 0.005
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 38 0.006
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 36 0.014
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 36 0.014
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.23
SB_54925| Best HMM Match : MFS_1 (HMM E-Value=4.7e-27) 32 0.30
SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.92
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 1.6
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 2.8
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 142 bits (345), Expect = 1e-34
Identities = 63/73 (86%), Positives = 67/73 (91%)
Frame = +3
Query: 36 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 215
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 216 NEASGGKYVPRAI 254
NEA+GGKYVPRA+
Sbjct: 265 NEATGGKYVPRAV 277
Score = 99.5 bits (237), Expect = 1e-21
Identities = 47/67 (70%), Positives = 49/67 (73%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH ++
Sbjct: 278 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 337
Query: 434 ESCDLLQ 454
ESCD LQ
Sbjct: 338 ESCDCLQ 344
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 138 bits (333), Expect = 3e-33
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 243 PRAI 254
PRAI
Sbjct: 61 PRAI 64
Score = 99.5 bits (237), Expect = 1e-21
Identities = 47/67 (70%), Positives = 49/67 (73%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH ++
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 124
Query: 434 ESCDLLQ 454
ESCD LQ
Sbjct: 125 ESCDCLQ 131
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 138 bits (333), Expect = 3e-33
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 243 PRAI 254
PRAI
Sbjct: 61 PRAI 64
Score = 64.1 bits (149), Expect = 6e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVF 337
LVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 134 bits (323), Expect = 5e-32
Identities = 57/64 (89%), Positives = 62/64 (96%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 243 PRAI 254
PR++
Sbjct: 61 PRSV 64
Score = 98.7 bits (235), Expect = 2e-21
Identities = 45/67 (67%), Positives = 49/67 (73%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH ++
Sbjct: 65 LIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEA 124
Query: 434 ESCDLLQ 454
ESCD +Q
Sbjct: 125 ESCDCIQ 131
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 98.7 bits (235), Expect = 2e-21
Identities = 46/67 (68%), Positives = 49/67 (73%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH ++
Sbjct: 10 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 69
Query: 434 ESCDLLQ 454
ESCD +Q
Sbjct: 70 ESCDCIQ 76
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 82.2 bits (194), Expect = 2e-16
Identities = 37/69 (53%), Positives = 44/69 (63%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
LVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGH ++
Sbjct: 21 LVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEA 80
Query: 434 ESCDLLQXI 460
E+CD +Q +
Sbjct: 81 ENCDCMQGV 89
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 59.7 bits (138), Expect = 1e-09
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 236
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 237 YVPRAISSTWSPA 275
+VPRA+ P+
Sbjct: 61 HVPRAVFVDLEPS 73
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 237 YVPRAI 254
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 54.4 bits (125), Expect = 5e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 240 VPRAI 254
VPRA+
Sbjct: 495 VPRAV 499
Score = 50.4 bits (115), Expect = 8e-07
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GH
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGH 107
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 501 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 540
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 237 YVPRAISSTWSPAPWTLS 290
+VPRA+ P LS
Sbjct: 61 HVPRAVFVDLEPTVVALS 78
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 55.2 bits (127), Expect = 3e-08
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 237 YVPRAISSTWSP 272
+VPRA+ P
Sbjct: 61 HVPRAVFCDLEP 72
Score = 48.4 bits (110), Expect = 3e-06
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +2
Query: 260 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 69 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 107
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 55.2 bits (127), Expect = 3e-08
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 237 YVPRAI 254
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 107
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 54.8 bits (126), Expect = 4e-08
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 237 YVPRAI 254
+VPRA+
Sbjct: 646 HVPRAV 651
Score = 54.4 bits (125), Expect = 5e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 240 VPRAI 254
VPRA+
Sbjct: 574 VPRAV 578
Score = 54.0 bits (124), Expect = 7e-08
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 240 VPRAI 254
VPRA+
Sbjct: 126 VPRAV 130
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 132 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 171
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 653 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 692
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 54.4 bits (125), Expect = 5e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 240 VPRAI 254
VPRA+
Sbjct: 61 VPRAV 65
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 67 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 106
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 54.0 bits (124), Expect = 7e-08
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 240 VPRAISSTWSP 272
VPRA+ + P
Sbjct: 866 VPRAVFADLEP 876
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 240 VPRAI 254
VPRA+
Sbjct: 433 VPRAV 437
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 439 VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 478
Score = 48.4 bits (110), Expect = 3e-06
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +2
Query: 260 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 873 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 911
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 54.0 bits (124), Expect = 7e-08
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 240 VPRAISSTWSPA 275
VPRA+ P+
Sbjct: 480 VPRAVFVDLEPS 491
Score = 50.4 bits (115), Expect = 8e-07
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 486 VDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGH 525
Score = 48.4 bits (110), Expect = 3e-06
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +2
Query: 260 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 54 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 92
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 108 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAISSTWSP 272
+G WE+ EHGI P G D + + N +++E GK+VPRA+ P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 48.8 bits (111), Expect = 2e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 33 VDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGH 72
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 47.6 bits (108), Expect = 6e-06
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GH
Sbjct: 978 LVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGH 1018
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 230
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 231 GKY 239
GK+
Sbjct: 254 GKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 120 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 221
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 281 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGH 44
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 230 RQVRAPRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 364
+ ++A L+D+E G ++++ GP +F + SG GNNW
Sbjct: 71 KSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 37.5 bits (83), Expect = 0.006
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 287 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGH 32
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 37.5 bits (83), Expect = 0.006
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 287 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGH 32
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 36.3 bits (80), Expect = 0.014
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 287 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
VR G + +F PD + G+ A NN+A+GH
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGH 32
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 36.3 bits (80), Expect = 0.014
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 287 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
+R+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGH 32
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 32.3 bits (70), Expect = 0.23
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 72 IVHIQAGQCGNQIGAKFWEIISDE 143
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
Score = 30.7 bits (66), Expect = 0.70
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 320 PDNFVFGQS-GAGNNWAKGHSRRVLSSSIQF*TSFERKRESCDLLQXIPTDTLARAAAPG 496
P F Q G+GNNWA G S S + +R+ E CD L T L+ A G
Sbjct: 94 PKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGFLT-LLSLAGGTG 152
Query: 497 S 499
S
Sbjct: 153 S 153
>SB_54925| Best HMM Match : MFS_1 (HMM E-Value=4.7e-27)
Length = 1373
Score = 31.9 bits (69), Expect = 0.30
Identities = 29/114 (25%), Positives = 47/114 (41%)
Frame = -1
Query: 496 TGCRRPSECVSWNPLEQITRFPLPFERRLKLNRRAQHPP*VSLGPVVAGAGLSEDEVVRT 317
T RR S + P+E+ T+ LP RR + PP VS V A G+ ++
Sbjct: 959 TKSRRRSGIIKAKPVEEFTKLKLPSRRRETKVLHLKTPPPVSPVKVQASTGMIPPPFIK- 1017
Query: 316 EDLSERSRADRVHGAGLQVDEMARGTYLPPEASL*YTLMRSNCKSESPW*APVG 155
+ + + + L D+ T L P+ L + + S K++ A VG
Sbjct: 1018 GSIIQLTSGELKRVEDLTTDDFVHSTGLCPDLKLETSTVVSVRKNDEVGMALVG 1071
>SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 30.3 bits (65), Expect = 0.92
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = -1
Query: 499 GTGCRRPSECV--SWNPLEQITRFPLPFERRLKLN-RRAQH 386
G GC R + SWNPL++ PLP + LK++ +A H
Sbjct: 22 GVGCSRQQDGGHGSWNPLKECVTTPLPKQLALKMDGAQASH 62
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 4.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP ++ +CP
Sbjct: 51 CPLKEMLDTPLCPLKEMLDTPLCP 74
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP ++ +CP
Sbjct: 73 CPLKEMLNTPLCPLKEMLNTPLCP 96
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP ++ +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP ++ +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP ++ +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173
Score = 27.1 bits (57), Expect = 8.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP ++ +CP
Sbjct: 7 CPLKEMLNTPLCPLKEMLDTPLCP 30
Score = 27.1 bits (57), Expect = 8.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP ++ +CP
Sbjct: 29 CPLKKMLNTPLCPLKEMLNTPLCP 52
Score = 27.1 bits (57), Expect = 8.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP ++ +CP
Sbjct: 40 CPLKEMLNTPLCPLKEMLDTPLCP 63
Score = 27.1 bits (57), Expect = 8.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 375 CPLAQLLPAPDCPKTKLSGRKICP 304
CPL ++L P CP ++ +CP
Sbjct: 161 CPLKEMLNTPLCPLKEMLDAPLCP 184
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 351 APDCPKTKLSGRKICPKGPERTESMVPGSKST 256
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 218 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPEL 117
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,697,441
Number of Sequences: 59808
Number of extensions: 319159
Number of successful extensions: 866
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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