Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1290
(499 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 33 0.005
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 33 0.005
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 33 0.005
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 33 0.005
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 27 0.47
AF395079-1|AAK97461.1| 371|Anopheles gambiae basic helix-loop-h... 26 0.62
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 25 1.1
AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein. 24 3.3
AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein. 24 3.3
AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein. 24 3.3
AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein. 24 3.3
AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein. 24 3.3
AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P... 23 5.8
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 23 7.6
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 23 7.6
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 33.1 bits (72), Expect = 0.005
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 382 EGAELVDSVLDVVRKE 429
EGAELVD+VLDVVRKE
Sbjct: 4 EGAELVDAVLDVVRKE 19
Score = 25.8 bits (54), Expect = 0.82
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3
Query: 447 CSXGFQLTHSLG 482
C GFQLTHSLG
Sbjct: 25 CLQGFQLTHSLG 36
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 33.1 bits (72), Expect = 0.005
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 382 EGAELVDSVLDVVRKE 429
EGAELVD+VLDVVRKE
Sbjct: 4 EGAELVDAVLDVVRKE 19
Score = 25.8 bits (54), Expect = 0.82
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3
Query: 447 CSXGFQLTHSLG 482
C GFQLTHSLG
Sbjct: 25 CLQGFQLTHSLG 36
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 33.1 bits (72), Expect = 0.005
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 382 EGAELVDSVLDVVRKE 429
EGAELVD+VLDVVRKE
Sbjct: 4 EGAELVDAVLDVVRKE 19
Score = 25.8 bits (54), Expect = 0.82
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3
Query: 447 CSXGFQLTHSLG 482
C GFQLTHSLG
Sbjct: 25 CLQGFQLTHSLG 36
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 33.1 bits (72), Expect = 0.005
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 382 EGAELVDSVLDVVRKE 429
EGAELVD+VLDVVRKE
Sbjct: 4 EGAELVDAVLDVVRKE 19
Score = 25.8 bits (54), Expect = 0.82
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3
Query: 447 CSXGFQLTHSLG 482
C GFQLTHSLG
Sbjct: 25 CLQGFQLTHSLG 36
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 26.6 bits (56), Expect = 0.47
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWE 128
MRE + + GQ G QIG W+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
>AF395079-1|AAK97461.1| 371|Anopheles gambiae basic
helix-loop-helix transcriptionfactor ASH protein.
Length = 371
Score = 26.2 bits (55), Expect = 0.62
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 190 SWSASMYTTMKPPAASTCPAPSRRLGARHHG 282
S S++ Y TM P+ ++ PAPS HG
Sbjct: 202 SGSSTYYGTMSEPSNASSPAPSHLSDHSSHG 232
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 25.4 bits (53), Expect = 1.1
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 222 ASGGKYV-PRAISSTWSPAPWTL 287
A GG YV A +++W+PA W L
Sbjct: 2698 AVGGAYVGASAANNSWNPAKWEL 2720
>AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein.
Length = 259
Score = 23.8 bits (49), Expect = 3.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 387 TLRECPLAQLLPAPDCPKTKLSGRKICPKG 298
T + CPL ++ DC +L KI KG
Sbjct: 203 TAKYCPLKPVITPEDCLAMELRRHKIHRKG 232
>AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein.
Length = 260
Score = 23.8 bits (49), Expect = 3.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 387 TLRECPLAQLLPAPDCPKTKLSGRKICPKG 298
T + CPL ++ DC +L KI KG
Sbjct: 204 TAKYCPLKPVITPEDCLAMELRRHKIHRKG 233
>AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 23.8 bits (49), Expect = 3.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 202 SMYTTMKPPAASTCPAPSRRLGARHH 279
S+YTT+ P+AST R +RHH
Sbjct: 13 SLYTTVSEPSAST----KHRHHSRHH 34
>AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 23.8 bits (49), Expect = 3.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 202 SMYTTMKPPAASTCPAPSRRLGARHH 279
S+YTT+ P+AST R +RHH
Sbjct: 13 SLYTTVSEPSAST----KHRHHSRHH 34
>AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 23.8 bits (49), Expect = 3.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 202 SMYTTMKPPAASTCPAPSRRLGARHH 279
S+YTT+ P+AST R +RHH
Sbjct: 13 SLYTTVSEPSAST----KHRHHSRHH 34
>AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P450
reductase protein.
Length = 679
Score = 23.0 bits (47), Expect = 5.8
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 117 KFWEIISDEHGIDPTG 164
KFW + D GI+ TG
Sbjct: 225 KFWPTVCDYFGIESTG 240
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 22.6 bits (46), Expect = 7.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 164 TGGVDAVLVGDDLPELSSDLVAALTSLDMYD 72
TGG ++ L+G L++ LV +L L D
Sbjct: 788 TGGTESQLIGAIFKTLATRLVQSLKELKSQD 818
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 134 DDLPELSSDLVAALTSLDMYDFP 66
D +PE+ SDL L L + D P
Sbjct: 21 DSVPEVPSDLQQQLDELQLADKP 43
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,394
Number of Sequences: 2352
Number of extensions: 11185
Number of successful extensions: 34
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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