Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1290
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 138 2e-33
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 129 1e-30
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 126 7e-30
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 126 7e-30
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 122 2e-28
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 120 4e-28
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 99 2e-21
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 99 2e-21
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 63 1e-10
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 63 1e-10
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 61 4e-10
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 61 4e-10
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 60 9e-10
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 59 2e-09
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 59 2e-09
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 57 8e-09
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 57 8e-09
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 57 8e-09
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 57 8e-09
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 57 8e-09
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 55 3e-08
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 52 2e-07
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 52 2e-07
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 41 4e-04
AF357877-1|AAK27715.1| 835|Caenorhabditis elegans receptor-medi... 27 7.6
AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor med... 27 7.6
AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor med... 27 7.6
AC024792-6|AAF60686.2| 901|Caenorhabditis elegans Hypothetical ... 27 10.0
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 138 bits (334), Expect = 2e-33
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 243 PRA 251
PRA
Sbjct: 61 PRA 63
Score = 97.5 bits (232), Expect = 5e-21
Identities = 45/67 (67%), Positives = 49/67 (73%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGH ++
Sbjct: 65 LVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124
Query: 434 ESCDLLQ 454
ESCD LQ
Sbjct: 125 ESCDCLQ 131
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 129 bits (311), Expect = 1e-30
Identities = 55/64 (85%), Positives = 60/64 (93%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 243 PRAI 254
PRA+
Sbjct: 61 PRAV 64
Score = 97.1 bits (231), Expect = 6e-21
Identities = 45/67 (67%), Positives = 48/67 (71%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGH ++
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124
Query: 434 ESCDLLQ 454
E CD LQ
Sbjct: 125 EGCDCLQ 131
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 126 bits (305), Expect = 7e-30
Identities = 55/64 (85%), Positives = 59/64 (92%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 243 PRAI 254
PRA+
Sbjct: 61 PRAV 64
Score = 93.5 bits (222), Expect = 8e-20
Identities = 44/67 (65%), Positives = 48/67 (71%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGH ++
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124
Query: 434 ESCDLLQ 454
ES D LQ
Sbjct: 125 ESTDCLQ 131
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 126 bits (305), Expect = 7e-30
Identities = 55/64 (85%), Positives = 59/64 (92%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 243 PRAI 254
PRA+
Sbjct: 61 PRAV 64
Score = 93.5 bits (222), Expect = 8e-20
Identities = 44/67 (65%), Positives = 48/67 (71%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGH ++
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124
Query: 434 ESCDLLQ 454
ES D LQ
Sbjct: 125 ESTDCLQ 131
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 122 bits (293), Expect = 2e-28
Identities = 51/64 (79%), Positives = 59/64 (92%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 243 PRAI 254
PRA+
Sbjct: 61 PRAV 64
Score = 97.5 bits (232), Expect = 5e-21
Identities = 45/67 (67%), Positives = 48/67 (71%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGH ++
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEA 124
Query: 434 ESCDLLQ 454
E CD LQ
Sbjct: 125 EGCDCLQ 131
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 120 bits (290), Expect = 4e-28
Identities = 50/64 (78%), Positives = 59/64 (92%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 243 PRAI 254
PRA+
Sbjct: 61 PRAV 64
Score = 97.5 bits (232), Expect = 5e-21
Identities = 45/67 (67%), Positives = 48/67 (71%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGH ++
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEA 124
Query: 434 ESCDLLQ 454
E CD LQ
Sbjct: 125 EGCDCLQ 131
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 98.7 bits (235), Expect = 2e-21
Identities = 42/64 (65%), Positives = 49/64 (76%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 243 PRAI 254
PRAI
Sbjct: 61 PRAI 64
Score = 57.6 bits (133), Expect = 5e-09
Identities = 26/67 (38%), Positives = 44/67 (65%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
LVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+ + + + R+
Sbjct: 65 LVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREA 124
Query: 434 ESCDLLQ 454
E+ D L+
Sbjct: 125 EAADSLE 131
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 98.7 bits (235), Expect = 2e-21
Identities = 42/64 (65%), Positives = 49/64 (76%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 243 PRAI 254
PRAI
Sbjct: 61 PRAI 64
Score = 57.6 bits (133), Expect = 5e-09
Identities = 26/67 (38%), Positives = 44/67 (65%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHSRRVLSSSIQF*TSFERKR 433
LVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+ + + + R+
Sbjct: 65 LVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREA 124
Query: 434 ESCDLLQ 454
E+ D L+
Sbjct: 125 EAADSLE 131
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 62.9 bits (146), Expect = 1e-10
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 236
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 237 YVPRAI 254
+VPR +
Sbjct: 67 HVPRCL 72
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 245 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 373
PR L VDLEP +D VR+G + +F P+ + G+ A N +A+G
Sbjct: 69 PRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARG 112
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 62.9 bits (146), Expect = 1e-10
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +3
Query: 57 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 230
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L + + N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 231 GKYVPRAISSTWSPAP 278
GK+VPRAI P P
Sbjct: 64 GKHVPRAIMVDLEPTP 79
Score = 46.8 bits (106), Expect = 9e-06
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
+VDLEP +D +R+G + +F P+ + G+ A NN+A+GH
Sbjct: 72 MVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGH 112
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 61.3 bits (142), Expect = 4e-10
Identities = 26/64 (40%), Positives = 35/64 (54%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 243 PRAI 254
PR+I
Sbjct: 61 PRSI 64
Score = 48.8 bits (111), Expect = 2e-06
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +2
Query: 245 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GH
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGH 105
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 61.3 bits (142), Expect = 4e-10
Identities = 26/64 (40%), Positives = 35/64 (54%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 243 PRAI 254
PR+I
Sbjct: 61 PRSI 64
Score = 48.8 bits (111), Expect = 2e-06
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +2
Query: 245 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GH
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGH 105
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 60.1 bits (139), Expect = 9e-10
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 236
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 237 YVPRAI 254
+VPRAI
Sbjct: 61 HVPRAI 66
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +2
Query: 245 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
PR + VDLEP +D VR+G + ++F P+ + G+ A NN+A+GH
Sbjct: 63 PRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGH 107
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/64 (40%), Positives = 36/64 (56%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 243 PRAI 254
PR+I
Sbjct: 61 PRSI 64
Score = 48.8 bits (111), Expect = 2e-06
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +2
Query: 245 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GH
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGH 105
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/64 (40%), Positives = 36/64 (56%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 243 PRAI 254
PR+I
Sbjct: 61 PRSI 64
Score = 48.8 bits (111), Expect = 2e-06
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +2
Query: 245 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GH
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGH 105
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 56.8 bits (131), Expect = 8e-09
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 243 PRAI 254
PR+I
Sbjct: 61 PRSI 64
Score = 48.4 bits (110), Expect = 3e-06
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +2
Query: 245 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GH
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGH 105
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 56.8 bits (131), Expect = 8e-09
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 237 YVPRAISSTWSP 272
+VPRA+ P
Sbjct: 61 HVPRAVMVDLEP 72
Score = 48.4 bits (110), Expect = 3e-06
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
+VDLEP +D +R+G + +F P+ + G+ A NN+A+GH
Sbjct: 67 MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGH 107
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 56.8 bits (131), Expect = 8e-09
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 243 PRAI 254
PR+I
Sbjct: 61 PRSI 64
Score = 48.4 bits (110), Expect = 3e-06
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +2
Query: 245 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GH
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGH 105
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 56.8 bits (131), Expect = 8e-09
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 237 YVPRAISSTWSP 272
+VPRA+ P
Sbjct: 61 HVPRAVMVDLEP 72
Score = 48.4 bits (110), Expect = 3e-06
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
+VDLEP +D +R+G + +F P+ + G+ A NN+A+GH
Sbjct: 67 MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGH 107
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 56.8 bits (131), Expect = 8e-09
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 237 YVPRAISSTWSP 272
+VPRA+ P
Sbjct: 61 HVPRAVMVDLEP 72
Score = 48.4 bits (110), Expect = 3e-06
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
+VDLEP +D +R+G + +F P+ + G+ A NN+A+GH
Sbjct: 67 MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGH 107
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 54.8 bits (126), Expect = 3e-08
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 240 VPRAISSTWSP 272
VPRA+ P
Sbjct: 61 VPRAVMVDLEP 71
Score = 48.4 bits (110), Expect = 3e-06
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
+VDLEP +D +R+G + +F P+ + G+ A NN+A+GH
Sbjct: 66 MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGH 106
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 52.8 bits (121), Expect = 1e-07
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGDSDLQLERINVYYNEASGGKYV 242
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 243 PRAI 254
PRAI
Sbjct: 66 PRAI 69
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +2
Query: 245 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
PR + VDLEP +D +R+G +G +F PD + G+ A NN+A+GH
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGH 110
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 52.0 bits (119), Expect = 2e-07
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +3
Query: 72 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 251
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 252 I 254
+
Sbjct: 66 V 66
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGH 376
LVDLEP ++ + P F +F DN GAGNNWA G+
Sbjct: 67 LVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASGY 110
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 52.0 bits (119), Expect = 2e-07
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +3
Query: 72 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 251
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 252 I 254
+
Sbjct: 66 V 66
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGH 376
LVDLEP ++ + P F +F DN GAGNNWA G+
Sbjct: 67 LVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASGY 110
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 49.6 bits (113), Expect = 1e-06
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 243 PRAI 254
PR+I
Sbjct: 60 PRSI 63
Score = 48.0 bits (109), Expect = 4e-06
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +2
Query: 245 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 376
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GH
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGH 104
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 245 PRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 373
PR L VDLEP +D VR+G + +F P+ + G+ A N +A+G
Sbjct: 41 PRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARG 84
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = +3
Query: 141 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAI 254
EHGI P G YH + D + E IN ++ E +GGK+VPR +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCL 44
>AF357877-1|AAK27715.1| 835|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform II protein.
Length = 835
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 337 EDEVVRTEDLSERSRADRVHGAGLQVDEMARGTYLPPEA 221
E+ TEDLSERS ++ G V+E +P E+
Sbjct: 125 EELNAETEDLSERSEVEKDEDLGRVVEEHKEPAQVPVES 163
>AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform a protein.
Length = 786
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 337 EDEVVRTEDLSERSRADRVHGAGLQVDEMARGTYLPPEA 221
E+ TEDLSERS ++ G V+E +P E+
Sbjct: 76 EELNAETEDLSERSEVEKDEDLGRVVEEHKEPAQVPVES 114
>AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform b protein.
Length = 835
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 337 EDEVVRTEDLSERSRADRVHGAGLQVDEMARGTYLPPEA 221
E+ TEDLSERS ++ G V+E +P E+
Sbjct: 125 EELNAETEDLSERSEVEKDEDLGRVVEEHKEPAQVPVES 163
>AC024792-6|AAF60686.2| 901|Caenorhabditis elegans Hypothetical
protein Y48G1A.1 protein.
Length = 901
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 390 STLRECPLAQLLPAPDCPKTKLSGRKICPKG 298
++L + P + P+P PK+ G + PKG
Sbjct: 751 NSLDDFPEMSISPSPSTPKSSSGGGRFAPKG 781
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,438,738
Number of Sequences: 27780
Number of extensions: 226330
Number of successful extensions: 702
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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