Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1289
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +1

Query: 556 ELVLFLPSVMPVKMGRTIPAFVKGQVPALG--CTLY 657
           ELVL L +   +  GR I    K Q  ALG  CTL+
Sbjct: 823 ELVLMLKNRYIILNGRLIKMETKAQSVALGKICTLH 858


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 195 ALTNGKVLWPLLEER 151
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 195 ALTNGKVLWPLLEER 151
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 195 ALTNGKVLWPLLEER 151
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 195 ALTNGKVLWPLLEER 151
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 275  ASSESAPSDQPIYPD 319
            ASS  APS  P+ PD
Sbjct: 2288 ASSTMAPSTTPMVPD 2302


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,805
Number of Sequences: 336
Number of extensions: 3595
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)