BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1289 (688 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 23 2.7 AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 6.3 AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 6.3 DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 8.3 DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 8.3 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.3 AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 8.3 >DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein protein. Length = 430 Score = 23.0 bits (47), Expect = 2.7 Identities = 7/18 (38%), Positives = 11/18 (61%) Frame = +2 Query: 476 PAQTQSPSWSREEGAACG 529 P T P+W++ + ACG Sbjct: 107 PKLTPYPNWAQNKAGACG 124 >AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 593 Score = 21.8 bits (44), Expect = 6.3 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = -1 Query: 343 PLAVVLSSVWVNWLIGG-GTFRRR*STAFWRGCGYTWAILQIWTS 212 P+ ++ S+ IGG G F+ ++G GY +L WT+ Sbjct: 71 PMFLMELSLGQMMTIGGLGVFK---IAPIFKGIGYATCVLSCWTN 112 >AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 646 Score = 21.8 bits (44), Expect = 6.3 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = -1 Query: 343 PLAVVLSSVWVNWLIGG-GTFRRR*STAFWRGCGYTWAILQIWTS 212 P+ ++ S+ IGG G F+ ++G GY +L WT+ Sbjct: 124 PMFLMELSLGQMMTIGGLGVFK---IAPIFKGIGYATCVLSCWTN 165 >DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase isoform B protein. Length = 931 Score = 21.4 bits (43), Expect = 8.3 Identities = 11/37 (29%), Positives = 17/37 (45%) Frame = +1 Query: 550 PFELVLFLPSVMPVKMGRTIPAFVKGQVPALGCTLYT 660 PF VLF+ S+ + + P + + L LYT Sbjct: 178 PFNPVLFISSLENISLNGIDPELTESEQHRLQNRLYT 214 >DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase isoform A protein. Length = 969 Score = 21.4 bits (43), Expect = 8.3 Identities = 11/37 (29%), Positives = 17/37 (45%) Frame = +1 Query: 550 PFELVLFLPSVMPVKMGRTIPAFVKGQVPALGCTLYT 660 PF VLF+ S+ + + P + + L LYT Sbjct: 216 PFNPVLFISSLENISLNGIDPELTESEQHRLQNRLYT 252 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 21.4 bits (43), Expect = 8.3 Identities = 9/21 (42%), Positives = 12/21 (57%) Frame = -2 Query: 606 GTPHFYGHNAWQKKNQLKWDQ 544 G P Y +KKNQ +W+Q Sbjct: 1488 GCPMIYFVVEHKKKNQQEWNQ 1508 >AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. Length = 652 Score = 21.4 bits (43), Expect = 8.3 Identities = 6/11 (54%), Positives = 7/11 (63%) Frame = +2 Query: 464 HHPDPAQTQSP 496 HHPDP + P Sbjct: 283 HHPDPGEVDLP 293 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 189,667 Number of Sequences: 438 Number of extensions: 4156 Number of successful extensions: 12 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20952180 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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