Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1286
         (464 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1VBS7 Cluster: ParB domain protein nuclease; n=1; Desu...    33   4.1  
UniRef50_A0PLP6 Cluster: Putative uncharacterized protein; n=1; ...    32   5.4  
UniRef50_P22357 Cluster: Anther-specific protein SF18 precursor;...    32   5.4  
UniRef50_Q3W8I8 Cluster: Protein kinase; n=1; Frankia sp. EAN1pe...    32   7.1  
UniRef50_A3RU01 Cluster: PILI ASSEMBLY PROTEIN, PilY1; n=3; Burk...    32   7.1  
UniRef50_Q7S9Z4 Cluster: Predicted protein; n=1; Neurospora cras...    32   7.1  
UniRef50_Q4P5H5 Cluster: Putative uncharacterized protein; n=1; ...    31   9.4  
UniRef50_Q0CWX3 Cluster: Predicted protein; n=1; Aspergillus ter...    31   9.4  

>UniRef50_A1VBS7 Cluster: ParB domain protein nuclease; n=1;
           Desulfovibrio vulgaris subsp. vulgaris DP4|Rep: ParB
           domain protein nuclease - Desulfovibrio vulgaris subsp.
           vulgaris (strain DP4)
          Length = 684

 Score = 32.7 bits (71), Expect = 4.1
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 338 PASVSWGIWC-GRWRSVTGRRQSRQHASRLLLETRPRPIITDP 463
           PAS    +W  G+ R + G   + +H +RLL   +P  ++TDP
Sbjct: 151 PASAIGDVWILGKHRLMCGDSTNAEHVARLLAGVQPHLMVTDP 193


>UniRef50_A0PLP6 Cluster: Putative uncharacterized protein; n=1;
           Mycobacterium ulcerans Agy99|Rep: Putative
           uncharacterized protein - Mycobacterium ulcerans (strain
           Agy99)
          Length = 193

 Score = 32.3 bits (70), Expect = 5.4
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = +1

Query: 391 APAVTPARQPPPA*DTAPPYHHRP 462
           APA TP  QPPP   T PP H  P
Sbjct: 145 APATTPRVQPPPQQPTHPPTHRFP 168


>UniRef50_P22357 Cluster: Anther-specific protein SF18 precursor;
           n=3; core eudicotyledons|Rep: Anther-specific protein
           SF18 precursor - Helianthus annuus (Common sunflower)
          Length = 161

 Score = 32.3 bits (70), Expect = 5.4
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 376 PPATPDPPGDRGGAELEPPSG 314
           PP TP PPG  GG+   PP+G
Sbjct: 98  PPPTPSPPGGDGGSGPAPPAG 118


>UniRef50_Q3W8I8 Cluster: Protein kinase; n=1; Frankia sp.
           EAN1pec|Rep: Protein kinase - Frankia sp. EAN1pec
          Length = 756

 Score = 31.9 bits (69), Expect = 7.1
 Identities = 19/59 (32%), Positives = 23/59 (38%)
 Frame = -2

Query: 379 APPATPDPPGDRGGAELEPPSGEXXXXXXXXXXXPTSNCEGGRMSNQIARTLP*GRSYG 203
           +PP  P PPG  G A+L   SG            P  + + G  S    R L  G  YG
Sbjct: 315 SPPGEPGPPGSPGAADLAVTSGPVAVPVAPGGPGPGGSADSGGASGPPGRNLFEGTPYG 373


>UniRef50_A3RU01 Cluster: PILI ASSEMBLY PROTEIN, PilY1; n=3;
           Burkholderiaceae|Rep: PILI ASSEMBLY PROTEIN, PilY1 -
           Ralstonia solanacearum UW551
          Length = 1111

 Score = 31.9 bits (69), Expect = 7.1
 Identities = 25/59 (42%), Positives = 31/59 (52%)
 Frame = +1

Query: 79  PSRTQQPVILDIINSSRHISKKRIRP*YNI*TWIDSVLCEAAHMIVPMAAYAQFGYSYA 255
           P RT+  V+ DIINSS     K   P YN   W+DS L  +A    P  +YA F  +YA
Sbjct: 511 PYRTRTGVLGDIINSSPTWVGKPSSP-YN-GPWVDS-LNSSASPAEPTGSYATFKTTYA 566


>UniRef50_Q7S9Z4 Cluster: Predicted protein; n=1; Neurospora
            crassa|Rep: Predicted protein - Neurospora crassa
          Length = 1435

 Score = 31.9 bits (69), Expect = 7.1
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +1

Query: 388  RAPAVTPARQPPPA*DTAPPYHHR 459
            RAP+ +P R PPPA    PP H R
Sbjct: 1183 RAPSRSPYRTPPPAYQKTPPVHSR 1206


>UniRef50_Q4P5H5 Cluster: Putative uncharacterized protein; n=1;
            Ustilago maydis|Rep: Putative uncharacterized protein -
            Ustilago maydis (Smut fungus)
          Length = 1161

 Score = 31.5 bits (68), Expect = 9.4
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = +1

Query: 385  HRAPAVTPARQPPPA*DTAPPYHHRP 462
            HRAPA+T A  P PA   APP  H P
Sbjct: 1086 HRAPAMTNAAAPTPA--PAPPTQHNP 1109


>UniRef50_Q0CWX3 Cluster: Predicted protein; n=1; Aspergillus
           terreus NIH2624|Rep: Predicted protein - Aspergillus
           terreus (strain NIH 2624)
          Length = 772

 Score = 31.5 bits (68), Expect = 9.4
 Identities = 19/74 (25%), Positives = 30/74 (40%)
 Frame = +1

Query: 43  AKRAQEWQRDAQPSRTQQPVILDIINSSRHISKKRIRP*YNI*TWIDSVLCEAAHMIVPM 222
           A R    +R  +P   Q+P +       RH+  +R+ P  ++       L +A H +V  
Sbjct: 613 ASRPPNNRRSQRPRHQQRPPLAYARPDVRHLPPRRLHPHRHLPRHPGHTLADAVHALVER 672

Query: 223 AAYAQFGYSYAPPR 264
           AA         PPR
Sbjct: 673 AALPHASLHRPPPR 686


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,564,150
Number of Sequences: 1657284
Number of extensions: 6849134
Number of successful extensions: 28513
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28360
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)