Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1286
         (464 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.4  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   1.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   4.3  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   4.3  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +1

Query: 382 CHRAPAVTPARQPPPA*DTAPPY 450
           CH      P  QPPPA    PPY
Sbjct: 128 CHNGD---PLSQPPPAHMGIPPY 147


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +1

Query: 382 CHRAPAVTPARQPPPA*DTAPPY 450
           CH      P  QPPPA    PPY
Sbjct: 20  CHNGD---PLSQPPPAHMGIPPY 39


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -2

Query: 373 PATPDPPGDRGGAELEPPSG 314
           P TPD PG      L P SG
Sbjct: 202 PRTPDKPGKGSFWSLHPDSG 221


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 391 APAVTPARQPPPA*DTAPPYHHRP 462
           APAV+ ARQ  PA     P + RP
Sbjct: 384 APAVSKARQFLPALPGYVPVYIRP 407


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 391 APAVTPARQPPPA*DTAPPYHHRP 462
           APAV+ ARQ  PA     P + RP
Sbjct: 209 APAVSKARQFLPALPGYVPVYIRP 232


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,055
Number of Sequences: 336
Number of extensions: 1538
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)