Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1286
         (464 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   4.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   6.5  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   6.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   6.5  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   8.6  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 379 APPATPDPPGDRGG 338
           A P TP PP   GG
Sbjct: 391 ATPCTPSPPRGPGG 404


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 212 SSLWQRTRNLVTHTP 256
           SS W++ RN+V  TP
Sbjct: 216 SSGWRKLRNIVHWTP 230


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 212 SSLWQRTRNLVTHTP 256
           SS W++ RN+V  TP
Sbjct: 131 SSGWRKLRNIVHWTP 145


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 212 SSLWQRTRNLVTHTP 256
           SS W++ RN+V  TP
Sbjct: 450 SSGWRKLRNIVHWTP 464


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +1

Query: 340 RLCLLGDLVWPVALCHRAPAV 402
           R+C+L  +   +  CH A  V
Sbjct: 157 RICILKSITCALQFCHNAGIV 177


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,441
Number of Sequences: 438
Number of extensions: 2082
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)