Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1284
         (345 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes ...    62   3e-09
UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;...    38   0.060
UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus tropicalis|...    36   0.18 
UniRef50_Q5DDG7 Cluster: SJCHGC07011 protein; n=1; Schistosoma j...    33   0.98 
UniRef50_Q9ZVV9 Cluster: Putative uncharacterized protein At2g07...    31   6.9  

>UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes
           scapularis|Rep: Putative secreted protein - Ixodes
           scapularis (Black-legged tick) (Deer tick)
          Length = 65

 Score = 61.7 bits (143), Expect = 3e-09
 Identities = 29/53 (54%), Positives = 34/53 (64%)
 Frame = +3

Query: 33  PY*GDTANGSIYQFWFLRSYXVTWITXVILELIHAIRTLTSDGMSAFIRSKPI 191
           P  G+TANGS+ Q WFLRS+  TWIT  ILELIHA+         AFIR + I
Sbjct: 2   PKQGETANGSLNQLWFLRSFLPTWITVAILELIHAVSPKPLGATGAFIRPRSI 54


>UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;
           n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 508

 Score = 37.5 bits (83), Expect = 0.060
 Identities = 18/31 (58%), Positives = 19/31 (61%)
 Frame = +2

Query: 98  YLDNXGNSRANTCNQNSDQ*WDECFY*IKTN 190
           YLDN GNSRANTC +      D C Y  KTN
Sbjct: 468 YLDNCGNSRANTCRRAPTS-GDACIYQTKTN 497


>UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus
           tropicalis|Rep: Novel protein - Xenopus tropicalis
           (Western clawed frog) (Silurana tropicalis)
          Length = 118

 Score = 35.9 bits (79), Expect = 0.18
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +3

Query: 285 MSALSTFDGSFCDYHG 332
           MSALSTFDG+FC YHG
Sbjct: 1   MSALSTFDGTFCAYHG 16


>UniRef50_Q5DDG7 Cluster: SJCHGC07011 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC07011 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 101

 Score = 33.5 bits (73), Expect = 0.98
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = +2

Query: 101 LDNXGNSRANTCNQNSDQ*WDECFY*IKTNRRRALRXKSLIXMNLDNFCRSLXKYRRXHL 280
           +DN  NSRANTC ++  +     F   +TNR + L     +  ++D  C ++   R  H+
Sbjct: 1   MDNCSNSRANTCLESLTRKGTGAFIRTETNRVQRLMTSVPVTSSVDELCDNVILSR--HV 58

Query: 281 SNVC 292
             +C
Sbjct: 59  WRLC 62


>UniRef50_Q9ZVV9 Cluster: Putative uncharacterized protein
           At2g07020; n=1; Arabidopsis thaliana|Rep: Putative
           uncharacterized protein At2g07020 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 620

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = -2

Query: 281 KDXVAGTXPAICKSYPDSSXLTTSXARPSVDWF*SNKSTHPITGQSSD 138
           K+   GT  A+     DS     S  RPS+DWF  N+S +  +  SS+
Sbjct: 219 KEYDQGTYQALVS---DSDLSFVSSDRPSMDWFEDNRSNYATSSSSSE 263


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 285,572,668
Number of Sequences: 1657284
Number of extensions: 4144771
Number of successful extensions: 7407
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7406
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)