BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1284 (345 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 1.3 DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 4.1 X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 20 7.2 EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 20 7.2 AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 20 7.2 AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 20 7.2 AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 20 7.2 DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 20 9.5 DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 20 9.5 DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 20 9.5 >DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine receptor alpha9subunit protein. Length = 431 Score = 22.6 bits (46), Expect = 1.3 Identities = 15/45 (33%), Positives = 20/45 (44%) Frame = +3 Query: 18 MXQCKPY*GDTANGSIYQFWFLRSYXVTWITXVILELIHAIRTLT 152 M C P DT +Y+F R Y + T VI + + TLT Sbjct: 230 MYACCP--NDTYPMIVYEFSISRHYGILHATYVIPAVTMMLLTLT 272 >DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor protein. Length = 459 Score = 21.0 bits (42), Expect = 4.1 Identities = 8/18 (44%), Positives = 9/18 (50%) Frame = -2 Query: 119 NYXSYPSNXVRSKEPELI 66 NY YP N R+ E I Sbjct: 175 NYVEYPQNSKRNSEESAI 192 >X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. Length = 162 Score = 20.2 bits (40), Expect = 7.2 Identities = 8/23 (34%), Positives = 13/23 (56%) Frame = +3 Query: 24 QCKPY*GDTANGSIYQFWFLRSY 92 +C Y D + +YQ++ LR Y Sbjct: 140 RCLHYTVDKSKPKVYQWFDLRKY 162 >EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 protein. Length = 167 Score = 20.2 bits (40), Expect = 7.2 Identities = 8/23 (34%), Positives = 13/23 (56%) Frame = +3 Query: 24 QCKPY*GDTANGSIYQFWFLRSY 92 +C Y D + +YQ++ LR Y Sbjct: 145 RCLHYTVDKSKPKVYQWFDLRKY 167 >AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic acetylcholine receptorApisa2 subunit protein. Length = 541 Score = 20.2 bits (40), Expect = 7.2 Identities = 8/22 (36%), Positives = 15/22 (68%) Frame = +2 Query: 38 LRRYREWLNISVLVP*ILLSYL 103 LRR + ++++VP + +SYL Sbjct: 231 LRRKTLFYTVNLIVPCVSISYL 252 >AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 protein. Length = 167 Score = 20.2 bits (40), Expect = 7.2 Identities = 8/23 (34%), Positives = 13/23 (56%) Frame = +3 Query: 24 QCKPY*GDTANGSIYQFWFLRSY 92 +C Y D + +YQ++ LR Y Sbjct: 145 RCLHYTVDKSKPKVYQWFDLRKY 167 >AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. Length = 493 Score = 20.2 bits (40), Expect = 7.2 Identities = 8/9 (88%), Positives = 8/9 (88%) Frame = +2 Query: 113 GNSRANTCN 139 GNSRANT N Sbjct: 131 GNSRANTYN 139 >DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 469 Score = 19.8 bits (39), Expect = 9.5 Identities = 8/22 (36%), Positives = 16/22 (72%) Frame = -3 Query: 190 IGFDLIKALIPSLVRVLIACIS 125 +GF ++ IPS++ V+I+ +S Sbjct: 231 MGFFMMDYYIPSILIVVISWVS 252 >DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel protein. Length = 489 Score = 19.8 bits (39), Expect = 9.5 Identities = 6/23 (26%), Positives = 17/23 (73%) Frame = -3 Query: 193 SIGFDLIKALIPSLVRVLIACIS 125 +IG+ + + +PS++ V+++ +S Sbjct: 240 NIGYFVFQTYLPSILIVMLSWVS 262 >DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine receptor beta1subunit protein. Length = 520 Score = 19.8 bits (39), Expect = 9.5 Identities = 9/29 (31%), Positives = 18/29 (62%) Frame = -3 Query: 145 VLIACISSRITXVIQVTX*DLRNQN*YIE 59 VL++ +S+ T ++ LRN++ YI+ Sbjct: 438 VLLSPEASKATEAVEFIAEHLRNEDLYIQ 466 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 81,212 Number of Sequences: 438 Number of extensions: 1225 Number of successful extensions: 10 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 51 effective length of database: 124,005 effective search space used: 7812315 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 39 (20.8 bits)
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