Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1283
         (657 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   3.9  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   5.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   5.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   6.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 104  VRIVGWGEDAEDKYWIVANS 45
            V I GW + A DKY  + N+
Sbjct: 1898 VAIGGWNDSAGDKYSRLVNN 1917



 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 490  RRQCWQ*HGPIRPAPALVGDGTD 558
            R  C +   P+ PAP  V  G D
Sbjct: 1000 REDCTKPPEPVTPAPPQVTTGVD 1022


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 540 QGWCGSDWAVSLPALSAI 487
           +GW G  + VS PAL+ +
Sbjct: 229 EGWNGQSFDVSQPALTTL 246


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = -2

Query: 179 DFFHYREGIYRHTRHGDQLMRGLHSVRIVGWGEDAED 69
           + F      YRH     +   GL  +  VG GED  D
Sbjct: 72  ELFDVTRDNYRHITELKRRFPGLRVLLSVGGGEDIGD 108


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 322 EGAVTQCRIGNDC 284
           + AV QC+ GN+C
Sbjct: 218 KNAVYQCKYGNNC 230


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 515 AQSDPHQPWSAMGLMYPYHSRXASNSYWILGRTCC 619
           A  DP++PW  +    P+  +   N   ILG   C
Sbjct: 520 AACDPYRPWQTVYNHRPW-QQLHLNKKQILGGEAC 553


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 67  LSSASSPQPTILTLWRP 117
           ++S S P+PTI T  RP
Sbjct: 394 MNSYSVPEPTISTTPRP 410


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,862
Number of Sequences: 336
Number of extensions: 3770
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)