BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1281 (691 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12 SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22 SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 33 0.22 SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 33 0.22 SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11) 33 0.22 SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07) 33 0.29 SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 32 0.38 SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38 SB_58646| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50 SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67 SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88 SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88 SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88 SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2 SB_58036| Best HMM Match : Cadherin (HMM E-Value=0) 31 1.2 SB_42688| Best HMM Match : PB1 (HMM E-Value=0.12) 31 1.2 SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032) 31 1.2 SB_45733| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5 SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 30 1.5 SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 30 1.5 SB_12781| Best HMM Match : Spindle_assoc (HMM E-Value=0.12) 30 1.5 SB_12462| Best HMM Match : Kinesin (HMM E-Value=0) 30 1.5 SB_44702| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.03) 30 2.0 SB_39219| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0 SB_7787| Best HMM Match : FHA (HMM E-Value=6e-14) 30 2.0 SB_30259| Best HMM Match : Apolipoprotein (HMM E-Value=0.0059) 30 2.0 SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0 SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 30 2.0 SB_55669| Best HMM Match : Ribosomal_LX (HMM E-Value=3.6) 29 2.7 SB_58390| Best HMM Match : DUF1167 (HMM E-Value=0) 29 3.6 SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 29 3.6 SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 29 4.7 SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7 SB_59115| Best HMM Match : Spectrin (HMM E-Value=0) 29 4.7 SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13) 29 4.7 SB_45619| Best HMM Match : M (HMM E-Value=0.01) 29 4.7 SB_24887| Best HMM Match : PspA_IM30 (HMM E-Value=0.19) 29 4.7 SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7 SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2 SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075) 28 6.2 SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 28 6.2 SB_35671| Best HMM Match : zf-C3HC4 (HMM E-Value=0.01) 28 8.2 SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2 SB_21195| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2 SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2 >SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3760 Score = 33.9 bits (74), Expect = 0.12 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Frame = +3 Query: 270 LEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVS 449 L+D +LL+ V+ L+G K+A DD + +VK LV+A TL D+ I Sbjct: 1658 LDDENKQLLDEKSREVTDLKGEVKKAQDDAD-SVKRLVDAIIEENDTLKQSEHDLLAIQE 1716 Query: 450 EFDRVSERIDELRQQI--EVSMLKSELY 527 + + + + +Q++ E S L S L+ Sbjct: 1717 DLEHTIDELVAEKQKLIQENSALVSSLH 1744 Score = 32.3 bits (70), Expect = 0.38 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 8/84 (9%) Frame = +3 Query: 261 VASLEDSRDELLEHADFVVSLLRGH-SKEAADDTEKNVKDLVEAY-------ERLRQTLA 416 + D + +E S LR + S E D+ E+ V+ L E Y E+L + L Sbjct: 1275 IQETSDKNERRVEELISENSKLRENTSLEEKDNNEEEVQQLREWYDVICKEKEQLERELE 1334 Query: 417 ARLADIEDIVSEFDRVSERIDELR 488 D ED++ +F RVS +ELR Sbjct: 1335 CTTKDNEDLMQDFKRVSAEKEELR 1358 >SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1524 Score = 33.1 bits (72), Expect = 0.22 Identities = 15/54 (27%), Positives = 30/54 (55%) Frame = +3 Query: 339 KEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIE 500 K +DD +K +KDL E L + L A+I+ + + +R+ + +++L I+ Sbjct: 449 KNKSDDDDKKIKDLNEKVRVLEKQLKENDAEIQGLKDDNERLEDELEDLSTTIK 502 >SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) Length = 858 Score = 33.1 bits (72), Expect = 0.22 Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 2/102 (1%) Frame = +3 Query: 210 QKACIGHQTCTPGTSSDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEA 389 Q AC+ H+ + GT S ED RD+ + S R H+ A D+ + +D + Sbjct: 155 QNACVLHRQNSNGTESGDDHFEDCRDD--SPPETSTSTTRYHN--AQDERREGNEDATKP 210 Query: 390 YER--LRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSM 509 ++R L+ + A + +S + + +D L++Q V++ Sbjct: 211 FQRAKLQPEKYSGSAIAFEFISRVQQYKDTLDRLKRQYSVNI 252 >SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) Length = 911 Score = 33.1 bits (72), Expect = 0.22 Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 2/102 (1%) Frame = +3 Query: 210 QKACIGHQTCTPGTSSDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEA 389 Q AC+ H+ + GT S ED RD+ + S R H+ A D+ + +D + Sbjct: 195 QNACVLHRQNSNGTESGDDHFEDCRDD--SPPETSTSTTRYHN--AQDERREGNEDATKP 250 Query: 390 YER--LRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSM 509 ++R L+ + A + +S + + +D L++Q V++ Sbjct: 251 FQRAKLQPEKYSGSAIAFEFISRVQQYKDTLDRLKRQYSVNI 292 >SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11) Length = 1011 Score = 33.1 bits (72), Expect = 0.22 Identities = 24/87 (27%), Positives = 43/87 (49%) Frame = +3 Query: 264 ASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDI 443 A +ED ++L + ++R S E E+ K L+ E LRQ+LA + IED+ Sbjct: 284 ALVEDLEEQLAAETQYS-DIIRSKSIENIAMAERENKQLMTIVEDLRQSLAEKDIGIEDL 342 Query: 444 VSEFDRVSERIDELRQQIEVSMLKSEL 524 + ++EL+ + E++ L S + Sbjct: 343 IMRC-----AVEELKLREEIASLSSHV 364 >SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07) Length = 1128 Score = 32.7 bits (71), Expect = 0.29 Identities = 15/46 (32%), Positives = 28/46 (60%) Frame = +3 Query: 360 EKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQI 497 +K +D + +LRQ + + +DIE+ V E + ++IDEL +Q+ Sbjct: 843 QKRCEDREDEIRQLRQIIEDKESDIEEQVMELIHLRDQIDELNRQL 888 >SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) Length = 1447 Score = 32.3 bits (70), Expect = 0.38 Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 1/95 (1%) Frame = +3 Query: 249 TSSDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLA 428 T V+SL+ +D L ++ + ++++ DD V+ L L+ ++++ Sbjct: 762 TMEQVSSLQAEKDNLARELAAYITREKNLARQS-DDLSLQVQTLDAEKRSLQSLVSSQEK 820 Query: 429 DIEDIVSEFDRVSERIDELRQQIEVSMLKS-ELYT 530 + D+ + ++ SER + QQ+++ KS EL T Sbjct: 821 QVADLSVKLEKSSERCRLMEQQLQMEQSKSTELTT 855 >SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 6406 Score = 32.3 bits (70), Expect = 0.38 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Frame = +3 Query: 264 ASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIE-- 437 A LE++RDEL VV L +K+ +KD + +R L A+L+D+E Sbjct: 3125 AFLENARDELASAGRIVVRLADDKNKDEPL-VAAGIKDKFDKVKRPYHDLVAKLSDLEGR 3183 Query: 438 ---------DIVSEFDRVSERIDELRQQIEVSMLKSELY 527 + FD R+DE+ + ML S +Y Sbjct: 3184 LQAAQMRSQEFQQSFDDFRGRLDEIEELSAKQMLVSAVY 3222 >SB_58646| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 107 Score = 31.9 bits (69), Expect = 0.50 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%) Frame = -1 Query: 151 RDSSGRPKVGSNVVAVGRQWRHVWPNLHKL-----CSKYRPVL 38 +D RPK N +A+ R WR W HK+ CSK + L Sbjct: 23 KDKLKRPKAMKNSMAIKRSWRACWIRQHKIFRVDNCSKVKNAL 65 >SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3287 Score = 31.5 bits (68), Expect = 0.67 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Frame = +3 Query: 390 YERLRQTLAARLADIEDIVSEFDRVSERIDE--LRQQIEVSMLKSELYTC 533 YE+ + + + A +ED V F R ++R+ E +R ++E L EL TC Sbjct: 325 YEKEYEAIKEKEAQLEDPVERFKRENKRLVEANMRLELENDYLAHELVTC 374 >SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3176 Score = 31.1 bits (67), Expect = 0.88 Identities = 20/58 (34%), Positives = 28/58 (48%) Frame = -2 Query: 426 RAAPLEFVAISHKPRRGLSRSSRCHRRLPSSGP*AETRQSRRVPAAHRGCLPDLRHRL 253 RAA + + R G+S + R H R P P E+R+SR + H PD R R+ Sbjct: 1388 RAAVIPEMVFPEPQRAGMSDAQRSHSRTPEPRP--ESRESRVI--VHTDRRPDSRERV 1441 >SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2509 Score = 31.1 bits (67), Expect = 0.88 Identities = 18/79 (22%), Positives = 37/79 (46%) Frame = +3 Query: 258 DVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIE 437 D+ + + S + + V LLR + E KD+V + +Q + L D + Sbjct: 965 DIFARKASEPSVAGPKERYVLLLRSPKLDTQVQLEPLFKDVVTDMLQFKQEMKQELIDYK 1024 Query: 438 DIVSEFDRVSERIDELRQQ 494 DI+S +S+++ ++Q+ Sbjct: 1025 DIISSLQLLSKQVTPMKQR 1043 >SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3306 Score = 31.1 bits (67), Expect = 0.88 Identities = 22/90 (24%), Positives = 39/90 (43%) Frame = +3 Query: 231 QTCTPGTSSDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQT 410 + TP L++ L + D L G K D ++ VK + + + L + Sbjct: 1830 EVATPPKLGQAQELDEEVASLAQSFD----LNAGKLKRVRDRVDQQVK-MCDEFAPLHEE 1884 Query: 411 LAARLADIEDIVSEFDRVSERIDELRQQIE 500 + LA++E +V VSE + RQQ++ Sbjct: 1885 VVGWLAEMEPVVENMRPVSEDVHATRQQLQ 1914 >SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 6863 Score = 30.7 bits (66), Expect = 1.2 Identities = 19/71 (26%), Positives = 31/71 (43%) Frame = +3 Query: 321 LLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIE 500 LL G +EAA+D ++V+ L E+Y L D+ FD + E + + E Sbjct: 749 LLDGTDREAAEDAFRHVEALWESYSDECSVRLKHLEDVHKRWVTFDALMESVTSWMHEAE 808 Query: 501 VSMLKSELYTC 533 + +L C Sbjct: 809 RLIKNGKLSAC 819 >SB_58036| Best HMM Match : Cadherin (HMM E-Value=0) Length = 6074 Score = 30.7 bits (66), Expect = 1.2 Identities = 15/61 (24%), Positives = 32/61 (52%) Frame = +3 Query: 357 TEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSMLKSELYTCS 536 T+ + +L + +L TL L+++ED +E R++ +++L Q+E + + C Sbjct: 197 TDPEIYELRDEVAKLETTLDEALSELEDKENENRRLTTDLEDLTDQLEQERKRITQHACP 256 Query: 537 A 539 A Sbjct: 257 A 257 >SB_42688| Best HMM Match : PB1 (HMM E-Value=0.12) Length = 1338 Score = 30.7 bits (66), Expect = 1.2 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +2 Query: 113 NVGPNFWTSRGVSERPSRL--LQIASNNWILTRAPEGVHWTPDMHS 244 NVGP FW V ++L L +AS +L P+G T D HS Sbjct: 868 NVGPLFWCEIQVPSSQAKLVDLDVASECAVLADIPDGPPPTHDAHS 913 >SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032) Length = 1293 Score = 30.7 bits (66), Expect = 1.2 Identities = 22/94 (23%), Positives = 51/94 (54%) Frame = +3 Query: 252 SSDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLAD 431 SS+ S E E+ ++ + + +L +S++ A+ K K+ V+ E ++ L + +D Sbjct: 71 SSNQDSQEKLHREIDQYQNELSALQNTYSQKIAN-LNKKFKE-VDNLEGMKTELGSSGSD 128 Query: 432 IEDIVSEFDRVSERIDELRQQIEVSMLKSELYTC 533 + + E + + I+ELRQQ++ ++ ++ +C Sbjct: 129 VAALKEELELAHKTIEELRQQLDRTVEYAKKKSC 162 >SB_45733| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 806 Score = 30.3 bits (65), Expect = 1.5 Identities = 17/85 (20%), Positives = 36/85 (42%) Frame = +3 Query: 285 DELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRV 464 +E L+ V L H+K+ N + L+ E++ L D+ED+ +++V Sbjct: 149 EEKLDSEHSAVGSLVNHTKQVEQTLMGNQQQLLSRREQIHVRLERLKEDLEDLQDSYEQV 208 Query: 465 SERIDELRQQIEVSMLKSELYTCSA 539 ++ + I + + CS+ Sbjct: 209 TKNARVMNDDIRSLRINWKFRQCSS 233 >SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) Length = 2155 Score = 30.3 bits (65), Expect = 1.5 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Frame = +3 Query: 333 HSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIE-VSM 509 H + D + + D + + L++TL A +++SE D + RID ++E + Sbjct: 1352 HMQVELDSCKSEISDTKKKNKELQETLYKLEAHSSELISENDSLKSRIDIAAIELESIQA 1411 Query: 510 LKSEL 524 KSEL Sbjct: 1412 EKSEL 1416 >SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) Length = 1292 Score = 30.3 bits (65), Expect = 1.5 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +3 Query: 369 VKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSMLK 515 +KDL E LR+ L A+ A +EDI E + Q VSM++ Sbjct: 176 IKDLTRQVEELRENLKAKQAILEDINRENQELKSHKGSTPNQDYVSMIE 224 >SB_12781| Best HMM Match : Spindle_assoc (HMM E-Value=0.12) Length = 200 Score = 30.3 bits (65), Expect = 1.5 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = +2 Query: 491 ANRGLHAKVRTLYVFGEDEEDNVKTLTAEVSELVERTKTFTEE 619 A +G +V +L E E ++TL V ELV + K TEE Sbjct: 116 ALKGSEERVSSLQKTVEARESTIRTLECRVDELVRQKKKITEE 158 >SB_12462| Best HMM Match : Kinesin (HMM E-Value=0) Length = 803 Score = 30.3 bits (65), Expect = 1.5 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = +3 Query: 351 DDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSE-RIDELRQQIEVSMLKSEL 524 D + +K + +RL L + +I+D+ EF+R E +D +R+Q + L+ ++ Sbjct: 556 DSLQDEIKFKTKTIDRLENRLQSYQVEIDDLQEEFERDREDYLDSIRKQEQTIKLQQQI 614 >SB_44702| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.03) Length = 307 Score = 29.9 bits (64), Expect = 2.0 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 3/91 (3%) Frame = +3 Query: 150 RSGHHGCFRSPQTIGY*PEHQKACIGHQTCTPGTSSDVASLEDS---RDELLEHADFVVS 320 RSG R + + Y E +K + C S+D+ SL + +D+++E ++ Sbjct: 215 RSGFEDIIRKNEFVKY-QEIEKLEQTLKNCKKQHSTDLTSLSGNLAEKDQVIEALKRGIT 273 Query: 321 LLRGHSKEAADDTEKNVKDLVEAYERLRQTL 413 K ++TEKN KDL++ R+ L Sbjct: 274 KKDEEIKALKENTEKNEKDLLQTAHGYRREL 304 >SB_39219| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1951 Score = 29.9 bits (64), Expect = 2.0 Identities = 18/88 (20%), Positives = 43/88 (48%) Frame = +3 Query: 255 SDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADI 434 +D S ED L++ + + + KE ++ +++L +A + L++ L D+ Sbjct: 551 ADTPSKEDIEVALIDEVAKLKNQQQDALKEMEKKNKRKLRELQKAQKPLQELLEQHKKDL 610 Query: 435 EDIVSEFDRVSERIDELRQQIEVSMLKS 518 E E+++ E ++ + ++ +LKS Sbjct: 611 EQQRYEYEQQKEDLEAKLRNEQLQLLKS 638 >SB_7787| Best HMM Match : FHA (HMM E-Value=6e-14) Length = 379 Score = 29.9 bits (64), Expect = 2.0 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Frame = +3 Query: 339 KEAADDTEKNVKDLVEAYERLRQT---LAARLADIEDIVSEFDRVSERIDELRQQ 494 KEA + E+ KDL+ + +L+ T L R I ++ E +R + + E RQ+ Sbjct: 260 KEAEVEAERREKDLLSSMGKLQTTEKQLKDRTRQIAELQGELERAKQALSEERQR 314 >SB_30259| Best HMM Match : Apolipoprotein (HMM E-Value=0.0059) Length = 422 Score = 29.9 bits (64), Expect = 2.0 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = +3 Query: 237 CTPGTSSDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDL 380 C T+ + S+ED D+ E + R H K DDT + VK L Sbjct: 186 CVKWTARERQSVEDLPDDTRESVKHLPDDTREHIKHLPDDTRERVKHL 233 >SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2916 Score = 29.9 bits (64), Expect = 2.0 Identities = 14/58 (24%), Positives = 33/58 (56%) Frame = +3 Query: 360 EKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSMLKSELYTC 533 E N+ + V+ E ++ L + +D+ + E + + I+ELRQQ++ ++ ++ +C Sbjct: 157 ELNILEEVDNLEGMKTELGSSGSDVAALKEELELAHKTIEELRQQLDRTVEYAKKKSC 214 >SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) Length = 4160 Score = 29.9 bits (64), Expect = 2.0 Identities = 13/45 (28%), Positives = 26/45 (57%) Frame = +3 Query: 363 KNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQI 497 K +KD E + RQ + + +IED+ S+F R +++L+ ++ Sbjct: 3562 KRLKDDQELARKQRQEVIEKGREIEDLQSKFKRKEREVEDLKHRL 3606 Score = 28.3 bits (60), Expect = 6.2 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +3 Query: 351 DDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSMLKS 518 DD E+ ++ E+ +L + L R+ D+E F R +ER+ Q+E S +S Sbjct: 2861 DDLERVKREARESKSQLEE-LRGRVEDLESAEEFFKRENERLVRENTQLETSYKES 2915 >SB_55669| Best HMM Match : Ribosomal_LX (HMM E-Value=3.6) Length = 479 Score = 29.5 bits (63), Expect = 2.7 Identities = 20/58 (34%), Positives = 30/58 (51%) Frame = -3 Query: 602 WYAPLARRLLPSKSSRCPLRLRRTRIKF*L*HGDLYLLSELVDPLRHAVEFRNNILYV 429 W P LL +++ R PL L +++ F DLYL++ P R A F+NN Y+ Sbjct: 370 WSVPGQYLLLYAQTYRYPL-LHTSQLSF----NDLYLMANECKPKRAAKLFKNNCGYI 422 >SB_58390| Best HMM Match : DUF1167 (HMM E-Value=0) Length = 734 Score = 29.1 bits (62), Expect = 3.6 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +2 Query: 488 TANRGLHAKVRTLYVFGEDEEDNVKTLTAE 577 +A +GL K+R L + D EDN+K L AE Sbjct: 341 SALKGLQEKIRKLELERTDAEDNLKRLAAE 370 >SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) Length = 3342 Score = 29.1 bits (62), Expect = 3.6 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -2 Query: 660 ATSAGADPP*RFLLSSVKVLVRSTSSETSAVKVFTLSSSSSPNT 529 +TSAG+ PP + SS V + ST + T+ S S P+T Sbjct: 3042 STSAGSSPPTSGITSSAGVNISSTITPTTTFTSIIKSESGIPST 3085 >SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) Length = 3071 Score = 28.7 bits (61), Expect = 4.7 Identities = 14/72 (19%), Positives = 33/72 (45%) Frame = +3 Query: 306 DFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDEL 485 + + LRG K + + ERL Q + +IE + ++ ++ + + Sbjct: 2653 EMAIGNLRGQLKRELSNKNSECDGYITEIERLNQEHSEDQMEIETLKNKISKLERLLADT 2712 Query: 486 RQQIEVSMLKSE 521 R + EV+++++E Sbjct: 2713 RHEHEVAVVQAE 2724 >SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2672 Score = 28.7 bits (61), Expect = 4.7 Identities = 14/79 (17%), Positives = 41/79 (51%) Frame = +3 Query: 258 DVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIE 437 D++ +D +ELL+ ++ ++ + A +D + + + LRQ L + ++E Sbjct: 1241 DISDRDDRIEELLKVQVLALAEMKSFFESANEDLDVLCEQRSGEIDALRQELVDKTNEVE 1300 Query: 438 DIVSEFDRVSERIDELRQQ 494 + ++F+ + + +++Q+ Sbjct: 1301 HLRNDFENQTLELKDVQQR 1319 >SB_59115| Best HMM Match : Spectrin (HMM E-Value=0) Length = 1457 Score = 28.7 bits (61), Expect = 4.7 Identities = 18/82 (21%), Positives = 35/82 (42%) Frame = +1 Query: 22 VEQRTRELADTWNIACEGLAKRAATADQQLQRWTQLLDVQRSLGAAITAASDRLKQLDTN 201 +E++ L + W+ C R + + L W + D ++ L A + ++ L T Sbjct: 664 LEEQLAVLGERWSGVCRWTEMRWSILQEVLSNWQEYRDEEKRLAAWLMEKEREIEDLKTV 723 Query: 202 PSTRRRALDTRHALQELQAMSQ 267 + D R L++L A+ Q Sbjct: 724 DLSSLD--DVRTNLEQLVALEQ 743 >SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13) Length = 803 Score = 28.7 bits (61), Expect = 4.7 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Frame = +2 Query: 86 VPPLPTNSYNVGPNFWTSRGVSERPSRLLQIASNNWILTRA--PEGVHWTPDMHSRNFKR 259 V P+ Y G +G + R + + W R PE +H++ + ++ F + Sbjct: 512 VDPITDYVYTNGSRHCLKQGTKQVKEREC-VCNERWFGKRCHIPESIHYSNQLQTKTFLK 570 Query: 260 CRKSGRQ 280 RKS R+ Sbjct: 571 FRKSARR 577 >SB_45619| Best HMM Match : M (HMM E-Value=0.01) Length = 1315 Score = 28.7 bits (61), Expect = 4.7 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 13/70 (18%) Frame = +3 Query: 252 SSDVASLEDSRDELLEHADFVVSLLR----------GHSKEAADDTE---KNVKDLVEAY 392 S ++ASL D D EH + ++ +R G K+ AD+ + K +K+ Y Sbjct: 285 SQNLASLRDDIDRKEEHQERLIEQMRDLLDKYDHSEGQKKQLADELQNVTKKLKETSSEY 344 Query: 393 ERLRQTLAAR 422 ERL + L R Sbjct: 345 ERLSEELGER 354 >SB_24887| Best HMM Match : PspA_IM30 (HMM E-Value=0.19) Length = 320 Score = 28.7 bits (61), Expect = 4.7 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Frame = +3 Query: 354 DTEKNVKDLVEAYERLRQTL---AARLADIEDIVSEFDRVSERIDELRQQI 497 + E V+DL +RL+ ++ A R+ +ED +SE +++ ELR+ I Sbjct: 212 ELENRVEDLTCETQRLQNSVDQKAKRIQTLEDRISELEQLLASSQELREDI 262 >SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1401 Score = 28.7 bits (61), Expect = 4.7 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = +3 Query: 324 LRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQ 494 L G A D +K + + +R R AAR+ +ED E DR++E++ + ++ Sbjct: 530 LEGGLARAQDRLDKTLDNAETQLDRERSASAARIRGLED---ELDRMAEKLQKANER 583 >SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1870 Score = 28.3 bits (60), Expect = 6.2 Identities = 18/55 (32%), Positives = 29/55 (52%) Frame = +3 Query: 81 QTCRHCRPTATTLDPTFGRPEESRSGHHGCFRSPQTIGY*PEHQKACIGHQTCTP 245 +TC CR T++ D + P +R G C R+P+ + P +K+C G T +P Sbjct: 1304 KTCGQCRVTSSCKDNNYNCPSWARRGE--CRRNPRYMR--PNCRKSC-GLCTTSP 1353 >SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075) Length = 762 Score = 28.3 bits (60), Expect = 6.2 Identities = 18/62 (29%), Positives = 33/62 (53%) Frame = +3 Query: 333 HSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSML 512 ++K DD K K L+E E L + ++ A IE + F+ +E+I L+ +++ S Sbjct: 607 NAKGGVDDALKETKGLIEEEENL---IKSKDAQIEMMNESFEVQTEQIAALKGELKASTE 663 Query: 513 KS 518 K+ Sbjct: 664 KT 665 >SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) Length = 1774 Score = 28.3 bits (60), Expect = 6.2 Identities = 14/66 (21%), Positives = 38/66 (57%) Frame = +3 Query: 321 LLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIE 500 +L + A D +++KDL E + ++ ++ DI+ +++E ++++I+ +Q+ Sbjct: 870 ILNEELRHALDAKNRDIKDLKETVVKFKRRISQIQVDIDILMNEKTELAKQIE---KQVS 926 Query: 501 VSMLKS 518 +S+ +S Sbjct: 927 LSLSES 932 >SB_35671| Best HMM Match : zf-C3HC4 (HMM E-Value=0.01) Length = 527 Score = 27.9 bits (59), Expect = 8.2 Identities = 18/71 (25%), Positives = 31/71 (43%) Frame = +3 Query: 243 PGTSSDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAAR 422 PG SD + S F+++ L H +K D++EA+ + Q LA Sbjct: 20 PGNRSDAQQILRSITSFEFIVVFIITYL-SHLSGITVKLQKKTSDIIEAHYMIEQVLALY 78 Query: 423 LADIEDIVSEF 455 ++ +DI + F Sbjct: 79 KSERDDIDAGF 89 >SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3259 Score = 27.9 bits (59), Expect = 8.2 Identities = 26/90 (28%), Positives = 39/90 (43%) Frame = +3 Query: 225 GHQTCTPGTSSDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLR 404 G Q T +A +E+ +E LE F LL SK+ T+++ KDL E L Sbjct: 2285 GSQGATMSNGPVMACIEE-HEEQLEEMQF---LLDKKSKKLERITKES-KDLKEKVTSLE 2339 Query: 405 QTLAARLADIEDIVSEFDRVSERIDELRQQ 494 + L E + S+ R+ +DE Q Sbjct: 2340 EELRLSNKQSERLTSQVQRLERDLDEAAAQ 2369 >SB_21195| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 189 Score = 27.9 bits (59), Expect = 8.2 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -3 Query: 251 SSWSACLVSNARLLVLGLVSNCLRRSEAA 165 S+WSACLV L++ L+ RR E A Sbjct: 107 SAWSACLVIGLASLLVSLIGLYTRRRELA 135 >SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 569 Score = 27.9 bits (59), Expect = 8.2 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 6/61 (9%) Frame = +3 Query: 360 EKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERID---ELR---QQIEVSMLKSE 521 EKN ++L + YE+L++ + R+ +E E ERID ELR Q ++ L++E Sbjct: 90 EKN-EELSQKYEKLQEEFSQRVEQLEQEKHELKLRLERIDGSHELRVQELQADIHALRNE 148 Query: 522 L 524 L Sbjct: 149 L 149 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,421,441 Number of Sequences: 59808 Number of extensions: 445041 Number of successful extensions: 1862 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 1689 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1861 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1793485733 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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