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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1281
         (691 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.12 
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.22 
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)              33   0.22 
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)              33   0.22 
SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11)                     33   0.22 
SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)        33   0.29 
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)                     32   0.38 
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.38 
SB_58646| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.50 
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.67 
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.88 
SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.88 
SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.88 
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.2  
SB_58036| Best HMM Match : Cadherin (HMM E-Value=0)                    31   1.2  
SB_42688| Best HMM Match : PB1 (HMM E-Value=0.12)                      31   1.2  
SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032)         31   1.2  
SB_45733| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.5  
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)                     30   1.5  
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)        30   1.5  
SB_12781| Best HMM Match : Spindle_assoc (HMM E-Value=0.12)            30   1.5  
SB_12462| Best HMM Match : Kinesin (HMM E-Value=0)                     30   1.5  
SB_44702| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.03)           30   2.0  
SB_39219| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.0  
SB_7787| Best HMM Match : FHA (HMM E-Value=6e-14)                      30   2.0  
SB_30259| Best HMM Match : Apolipoprotein (HMM E-Value=0.0059)         30   2.0  
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.0  
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)    30   2.0  
SB_55669| Best HMM Match : Ribosomal_LX (HMM E-Value=3.6)              29   2.7  
SB_58390| Best HMM Match : DUF1167 (HMM E-Value=0)                     29   3.6  
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)                  29   3.6  
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)        29   4.7  
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.7  
SB_59115| Best HMM Match : Spectrin (HMM E-Value=0)                    29   4.7  
SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13)                 29   4.7  
SB_45619| Best HMM Match : M (HMM E-Value=0.01)                        29   4.7  
SB_24887| Best HMM Match : PspA_IM30 (HMM E-Value=0.19)                29   4.7  
SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.7  
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.2  
SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075)               28   6.2  
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)            28   6.2  
SB_35671| Best HMM Match : zf-C3HC4 (HMM E-Value=0.01)                 28   8.2  
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.2  
SB_21195| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.2  
SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   8.2  

>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3760

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
 Frame = +3

Query: 270  LEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVS 449
            L+D   +LL+     V+ L+G  K+A DD + +VK LV+A      TL     D+  I  
Sbjct: 1658 LDDENKQLLDEKSREVTDLKGEVKKAQDDAD-SVKRLVDAIIEENDTLKQSEHDLLAIQE 1716

Query: 450  EFDRVSERIDELRQQI--EVSMLKSELY 527
            + +   + +   +Q++  E S L S L+
Sbjct: 1717 DLEHTIDELVAEKQKLIQENSALVSSLH 1744



 Score = 32.3 bits (70), Expect = 0.38
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
 Frame = +3

Query: 261  VASLEDSRDELLEHADFVVSLLRGH-SKEAADDTEKNVKDLVEAY-------ERLRQTLA 416
            +    D  +  +E      S LR + S E  D+ E+ V+ L E Y       E+L + L 
Sbjct: 1275 IQETSDKNERRVEELISENSKLRENTSLEEKDNNEEEVQQLREWYDVICKEKEQLERELE 1334

Query: 417  ARLADIEDIVSEFDRVSERIDELR 488
                D ED++ +F RVS   +ELR
Sbjct: 1335 CTTKDNEDLMQDFKRVSAEKEELR 1358


>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1524

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 15/54 (27%), Positives = 30/54 (55%)
 Frame = +3

Query: 339 KEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIE 500
           K  +DD +K +KDL E    L + L    A+I+ +  + +R+ + +++L   I+
Sbjct: 449 KNKSDDDDKKIKDLNEKVRVLEKQLKENDAEIQGLKDDNERLEDELEDLSTTIK 502


>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
          Length = 858

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
 Frame = +3

Query: 210 QKACIGHQTCTPGTSSDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEA 389
           Q AC+ H+  + GT S     ED RD+     +   S  R H+  A D+  +  +D  + 
Sbjct: 155 QNACVLHRQNSNGTESGDDHFEDCRDD--SPPETSTSTTRYHN--AQDERREGNEDATKP 210

Query: 390 YER--LRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSM 509
           ++R  L+    +  A   + +S   +  + +D L++Q  V++
Sbjct: 211 FQRAKLQPEKYSGSAIAFEFISRVQQYKDTLDRLKRQYSVNI 252


>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
          Length = 911

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
 Frame = +3

Query: 210 QKACIGHQTCTPGTSSDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEA 389
           Q AC+ H+  + GT S     ED RD+     +   S  R H+  A D+  +  +D  + 
Sbjct: 195 QNACVLHRQNSNGTESGDDHFEDCRDD--SPPETSTSTTRYHN--AQDERREGNEDATKP 250

Query: 390 YER--LRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSM 509
           ++R  L+    +  A   + +S   +  + +D L++Q  V++
Sbjct: 251 FQRAKLQPEKYSGSAIAFEFISRVQQYKDTLDRLKRQYSVNI 292


>SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11)
          Length = 1011

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 24/87 (27%), Positives = 43/87 (49%)
 Frame = +3

Query: 264 ASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDI 443
           A +ED  ++L     +   ++R  S E     E+  K L+   E LRQ+LA +   IED+
Sbjct: 284 ALVEDLEEQLAAETQYS-DIIRSKSIENIAMAERENKQLMTIVEDLRQSLAEKDIGIEDL 342

Query: 444 VSEFDRVSERIDELRQQIEVSMLKSEL 524
           +         ++EL+ + E++ L S +
Sbjct: 343 IMRC-----AVEELKLREEIASLSSHV 364


>SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)
          Length = 1128

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 15/46 (32%), Positives = 28/46 (60%)
 Frame = +3

Query: 360 EKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQI 497
           +K  +D  +   +LRQ +  + +DIE+ V E   + ++IDEL +Q+
Sbjct: 843 QKRCEDREDEIRQLRQIIEDKESDIEEQVMELIHLRDQIDELNRQL 888


>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
          Length = 1447

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
 Frame = +3

Query: 249  TSSDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLA 428
            T   V+SL+  +D L       ++  +  ++++ DD    V+ L      L+  ++++  
Sbjct: 762  TMEQVSSLQAEKDNLARELAAYITREKNLARQS-DDLSLQVQTLDAEKRSLQSLVSSQEK 820

Query: 429  DIEDIVSEFDRVSERIDELRQQIEVSMLKS-ELYT 530
             + D+  + ++ SER   + QQ+++   KS EL T
Sbjct: 821  QVADLSVKLEKSSERCRLMEQQLQMEQSKSTELTT 855


>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6406

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 11/99 (11%)
 Frame = +3

Query: 264  ASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIE-- 437
            A LE++RDEL      VV L    +K+        +KD  +  +R    L A+L+D+E  
Sbjct: 3125 AFLENARDELASAGRIVVRLADDKNKDEPL-VAAGIKDKFDKVKRPYHDLVAKLSDLEGR 3183

Query: 438  ---------DIVSEFDRVSERIDELRQQIEVSMLKSELY 527
                     +    FD    R+DE+ +     ML S +Y
Sbjct: 3184 LQAAQMRSQEFQQSFDDFRGRLDEIEELSAKQMLVSAVY 3222


>SB_58646| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 107

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
 Frame = -1

Query: 151 RDSSGRPKVGSNVVAVGRQWRHVWPNLHKL-----CSKYRPVL 38
           +D   RPK   N +A+ R WR  W   HK+     CSK +  L
Sbjct: 23  KDKLKRPKAMKNSMAIKRSWRACWIRQHKIFRVDNCSKVKNAL 65


>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3287

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +3

Query: 390 YERLRQTLAARLADIEDIVSEFDRVSERIDE--LRQQIEVSMLKSELYTC 533
           YE+  + +  + A +ED V  F R ++R+ E  +R ++E   L  EL TC
Sbjct: 325 YEKEYEAIKEKEAQLEDPVERFKRENKRLVEANMRLELENDYLAHELVTC 374


>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3176

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = -2

Query: 426  RAAPLEFVAISHKPRRGLSRSSRCHRRLPSSGP*AETRQSRRVPAAHRGCLPDLRHRL 253
            RAA +  +      R G+S + R H R P   P  E+R+SR +   H    PD R R+
Sbjct: 1388 RAAVIPEMVFPEPQRAGMSDAQRSHSRTPEPRP--ESRESRVI--VHTDRRPDSRERV 1441


>SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2509

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 18/79 (22%), Positives = 37/79 (46%)
 Frame = +3

Query: 258  DVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIE 437
            D+ + + S   +    +  V LLR    +     E   KD+V    + +Q +   L D +
Sbjct: 965  DIFARKASEPSVAGPKERYVLLLRSPKLDTQVQLEPLFKDVVTDMLQFKQEMKQELIDYK 1024

Query: 438  DIVSEFDRVSERIDELRQQ 494
            DI+S    +S+++  ++Q+
Sbjct: 1025 DIISSLQLLSKQVTPMKQR 1043


>SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3306

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 22/90 (24%), Positives = 39/90 (43%)
 Frame = +3

Query: 231  QTCTPGTSSDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQT 410
            +  TP        L++    L +  D    L  G  K   D  ++ VK + + +  L + 
Sbjct: 1830 EVATPPKLGQAQELDEEVASLAQSFD----LNAGKLKRVRDRVDQQVK-MCDEFAPLHEE 1884

Query: 411  LAARLADIEDIVSEFDRVSERIDELRQQIE 500
            +   LA++E +V     VSE +   RQQ++
Sbjct: 1885 VVGWLAEMEPVVENMRPVSEDVHATRQQLQ 1914


>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6863

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/71 (26%), Positives = 31/71 (43%)
 Frame = +3

Query: 321 LLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIE 500
           LL G  +EAA+D  ++V+ L E+Y          L D+      FD + E +     + E
Sbjct: 749 LLDGTDREAAEDAFRHVEALWESYSDECSVRLKHLEDVHKRWVTFDALMESVTSWMHEAE 808

Query: 501 VSMLKSELYTC 533
             +   +L  C
Sbjct: 809 RLIKNGKLSAC 819


>SB_58036| Best HMM Match : Cadherin (HMM E-Value=0)
          Length = 6074

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 15/61 (24%), Positives = 32/61 (52%)
 Frame = +3

Query: 357 TEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSMLKSELYTCS 536
           T+  + +L +   +L  TL   L+++ED  +E  R++  +++L  Q+E    +   + C 
Sbjct: 197 TDPEIYELRDEVAKLETTLDEALSELEDKENENRRLTTDLEDLTDQLEQERKRITQHACP 256

Query: 537 A 539
           A
Sbjct: 257 A 257


>SB_42688| Best HMM Match : PB1 (HMM E-Value=0.12)
          Length = 1338

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +2

Query: 113  NVGPNFWTSRGVSERPSRL--LQIASNNWILTRAPEGVHWTPDMHS 244
            NVGP FW    V    ++L  L +AS   +L   P+G   T D HS
Sbjct: 868  NVGPLFWCEIQVPSSQAKLVDLDVASECAVLADIPDGPPPTHDAHS 913


>SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032)
          Length = 1293

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 22/94 (23%), Positives = 51/94 (54%)
 Frame = +3

Query: 252 SSDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLAD 431
           SS+  S E    E+ ++ + + +L   +S++ A+   K  K+ V+  E ++  L +  +D
Sbjct: 71  SSNQDSQEKLHREIDQYQNELSALQNTYSQKIAN-LNKKFKE-VDNLEGMKTELGSSGSD 128

Query: 432 IEDIVSEFDRVSERIDELRQQIEVSMLKSELYTC 533
           +  +  E +   + I+ELRQQ++ ++  ++  +C
Sbjct: 129 VAALKEELELAHKTIEELRQQLDRTVEYAKKKSC 162


>SB_45733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 806

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/85 (20%), Positives = 36/85 (42%)
 Frame = +3

Query: 285 DELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRV 464
           +E L+     V  L  H+K+       N + L+   E++   L     D+ED+   +++V
Sbjct: 149 EEKLDSEHSAVGSLVNHTKQVEQTLMGNQQQLLSRREQIHVRLERLKEDLEDLQDSYEQV 208

Query: 465 SERIDELRQQIEVSMLKSELYTCSA 539
           ++    +   I    +  +   CS+
Sbjct: 209 TKNARVMNDDIRSLRINWKFRQCSS 233


>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
          Length = 2155

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +3

Query: 333  HSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIE-VSM 509
            H +   D  +  + D  +  + L++TL    A   +++SE D +  RID    ++E +  
Sbjct: 1352 HMQVELDSCKSEISDTKKKNKELQETLYKLEAHSSELISENDSLKSRIDIAAIELESIQA 1411

Query: 510  LKSEL 524
             KSEL
Sbjct: 1412 EKSEL 1416


>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
          Length = 1292

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 369 VKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSMLK 515
           +KDL    E LR+ L A+ A +EDI  E   +         Q  VSM++
Sbjct: 176 IKDLTRQVEELRENLKAKQAILEDINRENQELKSHKGSTPNQDYVSMIE 224


>SB_12781| Best HMM Match : Spindle_assoc (HMM E-Value=0.12)
          Length = 200

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 491 ANRGLHAKVRTLYVFGEDEEDNVKTLTAEVSELVERTKTFTEE 619
           A +G   +V +L    E  E  ++TL   V ELV + K  TEE
Sbjct: 116 ALKGSEERVSSLQKTVEARESTIRTLECRVDELVRQKKKITEE 158


>SB_12462| Best HMM Match : Kinesin (HMM E-Value=0)
          Length = 803

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +3

Query: 351 DDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSE-RIDELRQQIEVSMLKSEL 524
           D  +  +K   +  +RL   L +   +I+D+  EF+R  E  +D +R+Q +   L+ ++
Sbjct: 556 DSLQDEIKFKTKTIDRLENRLQSYQVEIDDLQEEFERDREDYLDSIRKQEQTIKLQQQI 614


>SB_44702| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.03)
          Length = 307

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
 Frame = +3

Query: 150 RSGHHGCFRSPQTIGY*PEHQKACIGHQTCTPGTSSDVASLEDS---RDELLEHADFVVS 320
           RSG     R  + + Y  E +K     + C    S+D+ SL  +   +D+++E     ++
Sbjct: 215 RSGFEDIIRKNEFVKY-QEIEKLEQTLKNCKKQHSTDLTSLSGNLAEKDQVIEALKRGIT 273

Query: 321 LLRGHSKEAADDTEKNVKDLVEAYERLRQTL 413
                 K   ++TEKN KDL++     R+ L
Sbjct: 274 KKDEEIKALKENTEKNEKDLLQTAHGYRREL 304


>SB_39219| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1951

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/88 (20%), Positives = 43/88 (48%)
 Frame = +3

Query: 255 SDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADI 434
           +D  S ED    L++    + +  +   KE     ++ +++L +A + L++ L     D+
Sbjct: 551 ADTPSKEDIEVALIDEVAKLKNQQQDALKEMEKKNKRKLRELQKAQKPLQELLEQHKKDL 610

Query: 435 EDIVSEFDRVSERIDELRQQIEVSMLKS 518
           E    E+++  E ++   +  ++ +LKS
Sbjct: 611 EQQRYEYEQQKEDLEAKLRNEQLQLLKS 638


>SB_7787| Best HMM Match : FHA (HMM E-Value=6e-14)
          Length = 379

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = +3

Query: 339 KEAADDTEKNVKDLVEAYERLRQT---LAARLADIEDIVSEFDRVSERIDELRQQ 494
           KEA  + E+  KDL+ +  +L+ T   L  R   I ++  E +R  + + E RQ+
Sbjct: 260 KEAEVEAERREKDLLSSMGKLQTTEKQLKDRTRQIAELQGELERAKQALSEERQR 314


>SB_30259| Best HMM Match : Apolipoprotein (HMM E-Value=0.0059)
          Length = 422

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +3

Query: 237 CTPGTSSDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDL 380
           C   T+ +  S+ED  D+  E    +    R H K   DDT + VK L
Sbjct: 186 CVKWTARERQSVEDLPDDTRESVKHLPDDTREHIKHLPDDTRERVKHL 233


>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2916

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/58 (24%), Positives = 33/58 (56%)
 Frame = +3

Query: 360 EKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSMLKSELYTC 533
           E N+ + V+  E ++  L +  +D+  +  E +   + I+ELRQQ++ ++  ++  +C
Sbjct: 157 ELNILEEVDNLEGMKTELGSSGSDVAALKEELELAHKTIEELRQQLDRTVEYAKKKSC 214


>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
          Length = 4160

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = +3

Query: 363  KNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQI 497
            K +KD  E   + RQ +  +  +IED+ S+F R    +++L+ ++
Sbjct: 3562 KRLKDDQELARKQRQEVIEKGREIEDLQSKFKRKEREVEDLKHRL 3606



 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +3

Query: 351  DDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSMLKS 518
            DD E+  ++  E+  +L + L  R+ D+E     F R +ER+     Q+E S  +S
Sbjct: 2861 DDLERVKREARESKSQLEE-LRGRVEDLESAEEFFKRENERLVRENTQLETSYKES 2915


>SB_55669| Best HMM Match : Ribosomal_LX (HMM E-Value=3.6)
          Length = 479

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = -3

Query: 602 WYAPLARRLLPSKSSRCPLRLRRTRIKF*L*HGDLYLLSELVDPLRHAVEFRNNILYV 429
           W  P    LL +++ R PL L  +++ F     DLYL++    P R A  F+NN  Y+
Sbjct: 370 WSVPGQYLLLYAQTYRYPL-LHTSQLSF----NDLYLMANECKPKRAAKLFKNNCGYI 422


>SB_58390| Best HMM Match : DUF1167 (HMM E-Value=0)
          Length = 734

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 488 TANRGLHAKVRTLYVFGEDEEDNVKTLTAE 577
           +A +GL  K+R L +   D EDN+K L AE
Sbjct: 341 SALKGLQEKIRKLELERTDAEDNLKRLAAE 370


>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
          Length = 3342

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -2

Query: 660  ATSAGADPP*RFLLSSVKVLVRSTSSETSAVKVFTLSSSSSPNT 529
            +TSAG+ PP   + SS  V + ST + T+       S S  P+T
Sbjct: 3042 STSAGSSPPTSGITSSAGVNISSTITPTTTFTSIIKSESGIPST 3085


>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
          Length = 3071

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/72 (19%), Positives = 33/72 (45%)
 Frame = +3

Query: 306  DFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDEL 485
            +  +  LRG  K    +        +   ERL Q  +    +IE + ++  ++   + + 
Sbjct: 2653 EMAIGNLRGQLKRELSNKNSECDGYITEIERLNQEHSEDQMEIETLKNKISKLERLLADT 2712

Query: 486  RQQIEVSMLKSE 521
            R + EV+++++E
Sbjct: 2713 RHEHEVAVVQAE 2724


>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2672

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/79 (17%), Positives = 41/79 (51%)
 Frame = +3

Query: 258  DVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIE 437
            D++  +D  +ELL+     ++ ++   + A +D +   +      + LRQ L  +  ++E
Sbjct: 1241 DISDRDDRIEELLKVQVLALAEMKSFFESANEDLDVLCEQRSGEIDALRQELVDKTNEVE 1300

Query: 438  DIVSEFDRVSERIDELRQQ 494
             + ++F+  +  + +++Q+
Sbjct: 1301 HLRNDFENQTLELKDVQQR 1319


>SB_59115| Best HMM Match : Spectrin (HMM E-Value=0)
          Length = 1457

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 18/82 (21%), Positives = 35/82 (42%)
 Frame = +1

Query: 22  VEQRTRELADTWNIACEGLAKRAATADQQLQRWTQLLDVQRSLGAAITAASDRLKQLDTN 201
           +E++   L + W+  C     R +   + L  W +  D ++ L A +      ++ L T 
Sbjct: 664 LEEQLAVLGERWSGVCRWTEMRWSILQEVLSNWQEYRDEEKRLAAWLMEKEREIEDLKTV 723

Query: 202 PSTRRRALDTRHALQELQAMSQ 267
             +     D R  L++L A+ Q
Sbjct: 724 DLSSLD--DVRTNLEQLVALEQ 743


>SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13)
          Length = 803

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
 Frame = +2

Query: 86  VPPLPTNSYNVGPNFWTSRGVSERPSRLLQIASNNWILTRA--PEGVHWTPDMHSRNFKR 259
           V P+    Y  G      +G  +   R   + +  W   R   PE +H++  + ++ F +
Sbjct: 512 VDPITDYVYTNGSRHCLKQGTKQVKEREC-VCNERWFGKRCHIPESIHYSNQLQTKTFLK 570

Query: 260 CRKSGRQ 280
            RKS R+
Sbjct: 571 FRKSARR 577


>SB_45619| Best HMM Match : M (HMM E-Value=0.01)
          Length = 1315

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
 Frame = +3

Query: 252 SSDVASLEDSRDELLEHADFVVSLLR----------GHSKEAADDTE---KNVKDLVEAY 392
           S ++ASL D  D   EH + ++  +R          G  K+ AD+ +   K +K+    Y
Sbjct: 285 SQNLASLRDDIDRKEEHQERLIEQMRDLLDKYDHSEGQKKQLADELQNVTKKLKETSSEY 344

Query: 393 ERLRQTLAAR 422
           ERL + L  R
Sbjct: 345 ERLSEELGER 354


>SB_24887| Best HMM Match : PspA_IM30 (HMM E-Value=0.19)
          Length = 320

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +3

Query: 354 DTEKNVKDLVEAYERLRQTL---AARLADIEDIVSEFDRVSERIDELRQQI 497
           + E  V+DL    +RL+ ++   A R+  +ED +SE +++     ELR+ I
Sbjct: 212 ELENRVEDLTCETQRLQNSVDQKAKRIQTLEDRISELEQLLASSQELREDI 262


>SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1401

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = +3

Query: 324 LRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQ 494
           L G    A D  +K + +     +R R   AAR+  +ED   E DR++E++ +  ++
Sbjct: 530 LEGGLARAQDRLDKTLDNAETQLDRERSASAARIRGLED---ELDRMAEKLQKANER 583


>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1870

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +3

Query: 81   QTCRHCRPTATTLDPTFGRPEESRSGHHGCFRSPQTIGY*PEHQKACIGHQTCTP 245
            +TC  CR T++  D  +  P  +R G   C R+P+ +   P  +K+C G  T +P
Sbjct: 1304 KTCGQCRVTSSCKDNNYNCPSWARRGE--CRRNPRYMR--PNCRKSC-GLCTTSP 1353


>SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075)
          Length = 762

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 18/62 (29%), Positives = 33/62 (53%)
 Frame = +3

Query: 333 HSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSML 512
           ++K   DD  K  K L+E  E L   + ++ A IE +   F+  +E+I  L+ +++ S  
Sbjct: 607 NAKGGVDDALKETKGLIEEEENL---IKSKDAQIEMMNESFEVQTEQIAALKGELKASTE 663

Query: 513 KS 518
           K+
Sbjct: 664 KT 665


>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
          Length = 1774

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/66 (21%), Positives = 38/66 (57%)
 Frame = +3

Query: 321  LLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIE 500
            +L    + A D   +++KDL E   + ++ ++    DI+ +++E   ++++I+   +Q+ 
Sbjct: 870  ILNEELRHALDAKNRDIKDLKETVVKFKRRISQIQVDIDILMNEKTELAKQIE---KQVS 926

Query: 501  VSMLKS 518
            +S+ +S
Sbjct: 927  LSLSES 932


>SB_35671| Best HMM Match : zf-C3HC4 (HMM E-Value=0.01)
          Length = 527

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +3

Query: 243 PGTSSDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAAR 422
           PG  SD   +  S         F+++ L  H        +K   D++EA+  + Q LA  
Sbjct: 20  PGNRSDAQQILRSITSFEFIVVFIITYL-SHLSGITVKLQKKTSDIIEAHYMIEQVLALY 78

Query: 423 LADIEDIVSEF 455
            ++ +DI + F
Sbjct: 79  KSERDDIDAGF 89


>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3259

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 26/90 (28%), Positives = 39/90 (43%)
 Frame = +3

Query: 225  GHQTCTPGTSSDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLR 404
            G Q  T      +A +E+  +E LE   F   LL   SK+    T+++ KDL E    L 
Sbjct: 2285 GSQGATMSNGPVMACIEE-HEEQLEEMQF---LLDKKSKKLERITKES-KDLKEKVTSLE 2339

Query: 405  QTLAARLADIEDIVSEFDRVSERIDELRQQ 494
            + L       E + S+  R+   +DE   Q
Sbjct: 2340 EELRLSNKQSERLTSQVQRLERDLDEAAAQ 2369


>SB_21195| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 189

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 251 SSWSACLVSNARLLVLGLVSNCLRRSEAA 165
           S+WSACLV     L++ L+    RR E A
Sbjct: 107 SAWSACLVIGLASLLVSLIGLYTRRRELA 135


>SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 569

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
 Frame = +3

Query: 360 EKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERID---ELR---QQIEVSMLKSE 521
           EKN ++L + YE+L++  + R+  +E    E     ERID   ELR    Q ++  L++E
Sbjct: 90  EKN-EELSQKYEKLQEEFSQRVEQLEQEKHELKLRLERIDGSHELRVQELQADIHALRNE 148

Query: 522 L 524
           L
Sbjct: 149 L 149


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,421,441
Number of Sequences: 59808
Number of extensions: 445041
Number of successful extensions: 1862
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1861
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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