Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1281
(691 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 26 0.97
DQ139945-1|ABA29466.1| 399|Anopheles gambiae protein O-fucosylt... 25 2.3
AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein. 25 2.3
EF592176-1|ABQ95972.2| 661|Anopheles gambiae laccase-3 protein. 25 3.0
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 25 3.0
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 24 3.9
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 24 3.9
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 24 5.2
AJ404478-1|CAC16182.1| 77|Anopheles gambiae putative GATA fact... 24 5.2
AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14... 24 5.2
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 24 5.2
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 23 6.9
AY214334-1|AAP69612.1| 519|Anopheles gambiae nicotinate phospho... 23 9.1
AY146728-1|AAO12088.1| 131|Anopheles gambiae odorant-binding pr... 23 9.1
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 26.2 bits (55), Expect = 0.97
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 336 SKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRV 464
+KE T+K + ++ E+ R+ A ADI+ +V E V
Sbjct: 311 AKEKVAHTQKKLDGALKTLEQARRADEAHQADIKKLVDELQEV 353
Score = 25.8 bits (54), Expect = 1.3
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 324 LRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIEV 503
L K + +D E + K++ E Y+R + L I +SE +R ++ D Q I+
Sbjct: 721 LENRLKYSMNDLETSKKNINE-YDRQLEDFTRELDQIGPKISEIERRMQQRDMKIQDIKE 779
Query: 504 SM 509
SM
Sbjct: 780 SM 781
Score = 25.4 bits (53), Expect = 1.7
Identities = 20/88 (22%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Frame = +3
Query: 255 SDVASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQ----TLAAR 422
+D+ L D E+ + + G SK+ + +DLV+ Y+RL+Q T +
Sbjct: 341 ADIKKLVDELQEVEVKRAAFENEVAGESKKRGSNVHLE-RDLVQEYDRLKQKADATSSKY 399
Query: 423 LADIEDIVSEFDRVSERID-ELRQQIEV 503
L ++ + E +R+D E+ ++ ++
Sbjct: 400 LIHLDSVNREQKSDQDRLDSEINKKAQI 427
>DQ139945-1|ABA29466.1| 399|Anopheles gambiae protein
O-fucosyltransferase 1 protein.
Length = 399
Score = 25.0 bits (52), Expect = 2.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 171 FRSPQTIGY*PEHQKACIGHQTCTPGTSSDVASLE 275
F SPQ +GY EH + + + C PG + + L+
Sbjct: 255 FSSPQCLGYRNEHGQ--LTAELCMPGRDTIIRQLK 287
>AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein.
Length = 401
Score = 25.0 bits (52), Expect = 2.3
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -3
Query: 227 SNARLLVLGLVSNCLRRSEAAVMA 156
++AR L LGL + L+R +AAV+A
Sbjct: 246 ADARQLYLGLFNPALKRLQAAVIA 269
>EF592176-1|ABQ95972.2| 661|Anopheles gambiae laccase-3 protein.
Length = 661
Score = 24.6 bits (51), Expect = 3.0
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -3
Query: 464 HAVEFRNNILYVREPRRXXXXXXXXXLDEVFHVLLG 357
H V L VREP+R D HV+LG
Sbjct: 190 HKVNGHYGALIVREPKRVDPNGDLYHYDTPAHVILG 225
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 24.6 bits (51), Expect = 3.0
Identities = 14/64 (21%), Positives = 23/64 (35%)
Frame = +1
Query: 103 QQLQRWTQLLDVQRSLGAAITAASDRLKQLDTNPSTRRRALDTRHALQELQAMSQVWKTA 282
QQ Q+W Q Q+ ++ QL +++ Q+ Q +W T
Sbjct: 364 QQQQQWQQQQQQQQQPRQSLPHRKQTQLQLSPRLQQQQQQQQQSQQQQQQQPQQLLWTTV 423
Query: 283 AMSC 294
SC
Sbjct: 424 VRSC 427
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 24.2 bits (50), Expect = 3.9
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -2
Query: 567 KVFTLSSSSSPNTYKVLTLAWRPLFAVGARRSSQTRGRIQKQYPLCPRA 421
K +SS P+ ++ + W PL A+ + QTR R+Q+ L R+
Sbjct: 333 KTMQRMTSSFPDPHRDVYW-WTPLIALLRQNCEQTRDRMQQTSDLQNRS 380
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 24.2 bits (50), Expect = 3.9
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +3
Query: 369 VKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELR 488
+ L E ERL T++ + ++ D +++ D +DE +
Sbjct: 296 INSLEEKTERLEDTISKQKRELMDALAKADERKTELDEAK 335
Score = 23.8 bits (49), Expect = 5.2
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 261 VASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLA 416
VA+LE EH D + +R +E +D E N + L +AY+ ++TLA
Sbjct: 716 VAALERYAAASREH-DLLEQRIRLF-EERNNDREANFRLLEDAYQSAKKTLA 765
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 23.8 bits (49), Expect = 5.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 558 TLSSSSSPNTYKVLTLAWRP 499
TL ++SSPN Y T+A +P
Sbjct: 160 TLCAASSPNAYTNTTIAVQP 179
>AJ404478-1|CAC16182.1| 77|Anopheles gambiae putative GATA factor
protein.
Length = 77
Score = 23.8 bits (49), Expect = 5.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 72 RFGQTCRHCRPTATTL 119
R G TC +C+ T TTL
Sbjct: 56 RSGVTCANCQTTTTTL 71
>AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14D2
protein.
Length = 372
Score = 23.8 bits (49), Expect = 5.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 86 VPPLPTNSYNVGPNFWTSRGVSERPSRLLQIA 181
V +P N+Y V P+++ G LLQ++
Sbjct: 196 VRDVPINAYVVHPDYYKQNGADYNDIALLQLS 227
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 23.8 bits (49), Expect = 5.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 133 PKVGSNVVAVGRQWRHVWPNLHKLC 59
PKV +V WR +W N+H+ C
Sbjct: 929 PKVSLENPSVN--WRLLWRNIHRSC 951
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 23.4 bits (48), Expect = 6.9
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +3
Query: 264 ASLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDI 443
A+LE +R E E + R E E+ +K + E+ + ++A +ED+
Sbjct: 884 AALEQARQEASEKGE------RPDESEQIPSVEQ-LKGKIHTTEKRIRLVSATQDKLEDV 936
Query: 444 VSEFDRVSERIDEL 485
V E + + DEL
Sbjct: 937 VEELEGKNRERDEL 950
>AY214334-1|AAP69612.1| 519|Anopheles gambiae nicotinate
phosphoribosyltransferase-like protein protein.
Length = 519
Score = 23.0 bits (47), Expect = 9.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 133 DVQRSLGAAITAASDRLKQLDTNPSTRRRALDTRHALQE 249
+V R GA A D L+++D NP + + RH QE
Sbjct: 397 NVFRLYGADGHALIDLLQRVDENPPEVGQKVLCRHPFQE 435
>AY146728-1|AAO12088.1| 131|Anopheles gambiae odorant-binding
protein AgamOBP21 protein.
Length = 131
Score = 23.0 bits (47), Expect = 9.1
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +2
Query: 566 LTAEVS--ELVERTKTFTEESRKRYGGSAPADVAQELFRFGN 685
L A VS E E K+ E+ R GG P D A ++ R G+
Sbjct: 11 LLAAVSTMEQHEIAKSLAEQCRAELGGELPEDFATKM-RLGD 51
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,471
Number of Sequences: 2352
Number of extensions: 14424
Number of successful extensions: 76
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -