Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1281
(691 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 32 0.44
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 31 0.78
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 31 0.78
Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical p... 30 1.4
Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical p... 30 1.4
Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical p... 30 1.8
U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidan... 30 1.8
U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidan... 30 1.8
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 30 1.8
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 30 1.8
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 30 1.8
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 30 1.8
AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein. 30 1.8
AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein. 30 1.8
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 29 2.4
Z79600-5|CAB01878.2| 412|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF520567-1|AAM75345.1| 412|Caenorhabditis elegans intraflagella... 29 4.1
AF016683-4|AAB66195.1| 410|Caenorhabditis elegans Hypothetical ... 29 4.1
Z99277-7|CAI79256.1| 271|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z48178-8|CAD54121.1| 214|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z35597-2|CAA84649.2| 254|Caenorhabditis elegans Hypothetical pr... 28 5.5
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical... 28 5.5
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 28 5.5
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 28 7.2
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl cyc... 28 7.2
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 28 7.2
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr... 27 9.6
AC024859-4|AAK29983.4| 472|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +3
Query: 267 SLEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAA 419
SLE++ D++ D ++ + +EA+ TEK+V D V++ E+L LA+
Sbjct: 356 SLEETTDKIGSKIDNTSQAIKSNLEEASLKTEKSVNDAVKSGEKLIGDLAS 406
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 503 LHAKVRTLYVFGEDEEDNVKTLTAEVSELVERTKTFTEESRKR 631
+H K RT + G+++ +NV + +A S V+ F++E RK+
Sbjct: 437 VHIKERTAVIRGKNQLENVSSESASGSSSVDTYPDFSDEERKK 479
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 503 LHAKVRTLYVFGEDEEDNVKTLTAEVSELVERTKTFTEESRKR 631
+H K RT + G+++ +NV + +A S V+ F++E RK+
Sbjct: 437 VHIKERTAVIRGKNQLENVSSESASGSSSVDTYPDFSDEERKK 479
>Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +3
Query: 315 VSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQ 494
+S +R ++A D E+N+ + + + LA ++ E+ +SE ++V + +D+L+ +
Sbjct: 279 ISRIRDDIRKAKDYLEQNL----HVKQHMEKELAMVKSEQEEKISENEKVQKMVDDLKNK 334
Query: 495 IEV 503
IE+
Sbjct: 335 IEL 337
>Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +3
Query: 315 VSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQ 494
+S +R ++A D E+N+ + + + LA ++ E+ +SE ++V + +D+L+ +
Sbjct: 279 ISRIRDDIRKAKDYLEQNL----HVKQHMEKELAMVKSEQEEKISENEKVQKMVDDLKNK 334
Query: 495 IEV 503
IE+
Sbjct: 335 IEL 337
>Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical
protein C50F4.11 protein.
Length = 679
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/62 (24%), Positives = 35/62 (56%)
Frame = +3
Query: 336 SKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSMLK 515
+K+ + ++ + L E +ER++Q + A + + + + E++ EL++Q+E +LK
Sbjct: 77 AKKEKESAQRQLVTLREDHERMKQMMQTNQAKLAEKTIDLETNREKMLELQEQVE--LLK 134
Query: 516 SE 521
E
Sbjct: 135 QE 136
>U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform a protein.
Length = 671
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +3
Query: 339 KEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQ 494
K+ ++ E+ + DL YER + + A D+E + ++++R + +D L +
Sbjct: 350 KKLREEFEEAMNDLRGEYEREQTSKAELQKDLESLRADYERANANLDNLNPE 401
>U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform b protein.
Length = 699
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +3
Query: 339 KEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQ 494
K+ ++ E+ + DL YER + + A D+E + ++++R + +D L +
Sbjct: 378 KKLREEFEEAMNDLRGEYEREQTSKAELQKDLESLRADYERANANLDNLNPE 429
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 85 RAATADQQLQRWTQLLDVQRSLGAAITAASDRLKQLDTNPSTRRRALD 228
R A + Q +QR +DV S+G + +R++QL+ + + AL+
Sbjct: 1303 RFADSSQNMQRAVDSMDVSSSVGVTLRFLKERIEQLEADNADLSDALE 1350
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 85 RAATADQQLQRWTQLLDVQRSLGAAITAASDRLKQLDTNPSTRRRALD 228
R A + Q +QR +DV S+G + +R++QL+ + + AL+
Sbjct: 1303 RFADSSQNMQRAVDSMDVSSSVGVTLRFLKERIEQLEADNADLSDALE 1350
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 85 RAATADQQLQRWTQLLDVQRSLGAAITAASDRLKQLDTNPSTRRRALD 228
R A + Q +QR +DV S+G + +R++QL+ + + AL+
Sbjct: 1063 RFADSSQNMQRAVDSMDVSSSVGVTLRFLKERIEQLEADNADLSDALE 1110
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 85 RAATADQQLQRWTQLLDVQRSLGAAITAASDRLKQLDTNPSTRRRALD 228
R A + Q +QR +DV S+G + +R++QL+ + + AL+
Sbjct: 1303 RFADSSQNMQRAVDSMDVSSSVGVTLRFLKERIEQLEADNADLSDALE 1350
>AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein.
Length = 679
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/62 (24%), Positives = 35/62 (56%)
Frame = +3
Query: 336 SKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSMLK 515
+K+ + ++ + L E +ER++Q + A + + + + E++ EL++Q+E +LK
Sbjct: 77 AKKEKESAQRQLVTLREDHERMKQMMQTNQAKLAEKTIDLETNREKMLELQEQVE--LLK 134
Query: 516 SE 521
E
Sbjct: 135 QE 136
>AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein.
Length = 672
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +3
Query: 339 KEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDELRQQ 494
K+ ++ E+ + DL YER + + A D+E + ++++R + +D L +
Sbjct: 350 KKLREEFEEAMNDLRGEYEREQTSKAELQKDLESLRADYERANANLDNLNPE 401
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +3
Query: 300 HADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTL-AARLADIED 440
H V++ + HS + D E++V DLV+ +ER ++ + +AR ++ED
Sbjct: 920 HPPKVLTGIGIHSPDGGIDKEEDVDDLVQRFERDQEPVHSAREEELED 967
>Z79600-5|CAB01878.2| 412|Caenorhabditis elegans Hypothetical
protein F59C6.7 protein.
Length = 412
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 399 LRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSMLKS 518
LR+ A + DR+S+ I++L+QQIE KS
Sbjct: 320 LREKYKAASVGVSSRTETLDRISDDIEQLKQQIEEQGAKS 359
>AF520567-1|AAM75345.1| 412|Caenorhabditis elegans intraflagellar
transport proteinCHE-13 protein.
Length = 412
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 399 LRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSMLKS 518
LR+ A + DR+S+ I++L+QQIE KS
Sbjct: 320 LREKYKAASVGVSSRTETLDRISDDIEQLKQQIEEQGAKS 359
>AF016683-4|AAB66195.1| 410|Caenorhabditis elegans Hypothetical
protein K09F6.5 protein.
Length = 410
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = +3
Query: 366 NVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSERIDEL------RQQIEVSMLKSELY 527
N + L+EAY +Q + D+ +V+EFD +EL + I+ M+ S++
Sbjct: 205 NSEFLIEAYNHGQQKFKFNVTDVYALVNEFDLTDGLSNELEAAIIEHKMIQYPMISSQVR 264
Query: 528 TC 533
+C
Sbjct: 265 SC 266
>Z99277-7|CAI79256.1| 271|Caenorhabditis elegans Hypothetical
protein Y53C12A.8 protein.
Length = 271
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 506 HAKVRTLYVFGEDEEDNVKTLTAEVSELVERTKTFTEES 622
HA++R+ Y+ +ED +++ A + EL E+ K F S
Sbjct: 194 HAQLRSYYLQRLIDEDIMRSNVARIQELTEKFKNFETAS 232
>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 273 EDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDL-VEAYERLRQTLAARLADIEDIVS 449
ED ELL+H D ++ H + D +N+++L A E + LAA +ED ++
Sbjct: 429 EDDEVELLDHEDLTIATPLSHMQ----DVTENIQNLDANAAEPIENPLAAA---VEDQIA 481
Query: 450 EFDRVSERI 476
+ ++ E +
Sbjct: 482 KDPKILEEV 490
>Z48178-8|CAD54121.1| 214|Caenorhabditis elegans Hypothetical
protein C05C10.7 protein.
Length = 214
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 354 DTEKNVKDLVEAYERLRQTLAARLADIEDIVSEFDRVSE 470
D +NVK+L++ R T+ L D+ED+ + + ++
Sbjct: 143 DDSQNVKNLLQMIRAFRSTVKIMLIDVEDLQDQITQEAQ 181
>Z35597-2|CAA84649.2| 254|Caenorhabditis elegans Hypothetical
protein C36E8.2 protein.
Length = 254
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/90 (25%), Positives = 41/90 (45%)
Frame = +3
Query: 270 LEDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQTLAARLADIEDIVS 449
+++S+D+L E R K+ D+ K + E + L+Q L + +I DI
Sbjct: 55 MDNSKDDLGERIFRRALERRDDFKQFIDNLSKGQR--YENSQYLKQFLLGIVENIMDI-D 111
Query: 450 EFDRVSERIDELRQQIEVSMLKSELYTCSA 539
E +R+SE Q + K + + C+A
Sbjct: 112 EINRISEEFGCNHVQFRANGFKPDFFACTA 141
>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 273 EDSRDELLEHADFVVSLLRGHSKEAADDTEKNVKDL-VEAYERLRQTLAARLADIEDIVS 449
ED ELL+H D ++ H + D +N+++L A E + LAA +ED ++
Sbjct: 429 EDDEVELLDHEDLTIATPLSHMQ----DVTENIQNLDANAAEPIENPLAAA---VEDQIA 481
Query: 450 EFDRVSERI 476
+ ++ E +
Sbjct: 482 KDPKILEEV 490
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 28.3 bits (60), Expect = 5.5
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Frame = +3
Query: 249 TSSDVASLEDSR---DELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERLRQT--L 413
T +D + ED + LLE+ + L D +K + DL E +Q+ L
Sbjct: 737 TQADAVASEDKVKQVESLLENLKEPLEELNNLRANLKDSNDK-ILDLQSQLELAQQSSDL 795
Query: 414 AARLADIEDIVSEFDRVSE---RIDELRQQIEVSMLKSELYT 530
A RL ED+ + RV E ++ EL QQIEVS + + T
Sbjct: 796 ADRLQ--EDLRTSDARVQELNIQVSELEQQIEVSSREFSVIT 835
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical protein
C18C4.5b protein.
Length = 1046
Score = 27.9 bits (59), Expect = 7.2
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Frame = +3
Query: 228 HQTCTPGTSSDVASLEDSRDELLEHADFVVSLLRGHSK--EAADDTEKNVKD----LVEA 389
H + TS ++ LED ELL+ D + ++ SK ++ D K +D ++E
Sbjct: 804 HTSQNSDTSKTISDLEDKISELLKTNDLLALDVQKLSKSLDSKDQQLKEAEDEKNLMLEE 863
Query: 390 YERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSM 509
+ L+ + A+I ++ +E R++ + + E S+
Sbjct: 864 VQALQNATPSDSAEIAELTTENARLAGELLKSHSAAERSL 903
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical protein
C18C4.5a protein.
Length = 1022
Score = 27.9 bits (59), Expect = 7.2
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Frame = +3
Query: 228 HQTCTPGTSSDVASLEDSRDELLEHADFVVSLLRGHSK--EAADDTEKNVKD----LVEA 389
H + TS ++ LED ELL+ D + ++ SK ++ D K +D ++E
Sbjct: 804 HTSQNSDTSKTISDLEDKISELLKTNDLLALDVQKLSKSLDSKDQQLKEAEDEKNLMLEE 863
Query: 390 YERLRQTLAARLADIEDIVSEFDRVSERIDELRQQIEVSM 509
+ L+ + A+I ++ +E R++ + + E S+
Sbjct: 864 VQALQNATPSDSAEIAELTTENARLAGELLKSHSAAERSL 903
>AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl
cyclase protein 19 protein.
Length = 1143
Score = 27.9 bits (59), Expect = 7.2
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +1
Query: 58 NIACEGLAKRAATADQQLQRWTQLLDVQRSLGAAITAASDRLKQLDT---NPSTRRRALD 228
N+A + L A + + RSLGAA+ R K+LD P R++L
Sbjct: 7 NMAIQKLRDDGFIAPFDFEVTVNYTECDRSLGAAVGMEFMRTKRLDVVIGPPCRDRKSLS 66
Query: 229 TRHALQELQAMSQVWKTAAMSCWNTPTL 312
R + Q + + ++ T A + ++TP L
Sbjct: 67 FRASSQFIISAMEIMATMA-TYYSTPML 93
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 285 DELLEHADFVVSLLRGHSKEAADDTEKNVKDLVEAYERL 401
D+ E ++RG S+ DD E+ V D V Y+ L
Sbjct: 397 DKKSETGKVATIIIRGSSQSRIDDVERAVDDAVNTYKAL 435
>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical protein
F15D4.1 protein.
Length = 1529
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 551 DNVKTLTAEVSELVERTKTFTEESRKRYGGSAPA 652
DN +T E EL+ +E++K+ GG PA
Sbjct: 1459 DNTSMMTMETGELMNMFTLDGDEAKKKPGGGEPA 1492
>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical
protein F16B12.6 protein.
Length = 1392
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = -2
Query: 483 ARRSSQTRGRIQKQYPLCPRAAPLEFVAISHKPRRGLSRSS 361
A+ S +T +K P+CP + + S +PRR + +++
Sbjct: 11 AQPSEETPAGEEKPLPMCPEESAKDTTVQSSRPRRNIRKNT 51
>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical protein
F15D4.1 protein.
Length = 1529
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 551 DNVKTLTAEVSELVERTKTFTEESRKRYGGSAPA 652
DN +T E EL+ +E++K+ GG PA
Sbjct: 1459 DNTSMMTMETGELMNMFTLDGDEAKKKPGGGEPA 1492
>AC024859-4|AAK29983.4| 472|Caenorhabditis elegans Hypothetical
protein Y71H2AM.11 protein.
Length = 472
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +3
Query: 210 QKACIGHQTCTPGTSSDVASLEDSRDELLEHADFVVSLLRGH--SKEAADDTEKNV 371
Q + Q PG + VA L DE+ E DF V + S D +KN+
Sbjct: 248 QLVTVDGQILIPGIAELVAPLTKDEDEIYEKIDFCVDTFKNETGSHGLMSDNKKNL 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,472,968
Number of Sequences: 27780
Number of extensions: 319156
Number of successful extensions: 1324
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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