Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1280
         (517 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   2.8  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   2.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   2.8  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    22   2.8  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   8.6  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   8.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   8.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.6  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 146 RSFPFRKWLHSSHYLWLCFRFQSKRSLCL 232
           ++    K  H++HYL    R +   +LCL
Sbjct: 234 QTLELEKEFHTNHYLTRRRRIEMAHALCL 262


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 395 TNSNIICLSSTYKLTNYVSETIIHRAVSTIIEENR 291
           TNS +   +  +KL  +VS  I+H       E N+
Sbjct: 321 TNSEV--RTELFKLAQHVSANIVHITAGNYFEINK 353


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 395 TNSNIICLSSTYKLTNYVSETIIHRAVSTIIEENR 291
           TNS +   +  +KL  +VS  I+H       E N+
Sbjct: 321 TNSEV--RTELFKLAQHVSANIVHITAGNYFEINK 353


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 146 RSFPFRKWLHSSHYLWLCFRFQSKRSLCL 232
           ++    K  H++HYL    R +   +LCL
Sbjct: 16  QTLELEKEFHTNHYLTRRRRIEMAHALCL 44


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 146 RSFPFRKWLHSSHYLWLCFRFQSKRSLCL 232
           ++    K  H +HYL    R +   +LCL
Sbjct: 17  QTLELEKEFHFNHYLTRRRRIEIAHALCL 45


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = -2

Query: 150 LRVCKLQASAYCPELGIVEGNFNDFVSIMVYSF 52
           L +C  +  A  P LG VEG         VY F
Sbjct: 10  LTLCHAEPIAELPNLGKVEGWQTTMNGRRVYRF 42


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 146 RSFPFRKWLHSSHYLWLCFRFQSKRSLCL 232
           ++    K  H +HYL    R +   +LCL
Sbjct: 168 QTLELEKEFHFNHYLTRRRRIEIAHALCL 196


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 146 RSFPFRKWLHSSHYLWLCFRFQSKRSLCL 232
           ++    K  H +HYL    R +   +LCL
Sbjct: 227 QTLELEKEFHFNHYLTRRRRIEIAHALCL 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,317
Number of Sequences: 336
Number of extensions: 2974
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)