Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1279
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   3.7  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    24   4.9  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   6.4  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   8.5  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   8.5  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 535 D*FCIRCSCHVGWL 494
           D  C +C C+VGW+
Sbjct: 486 DYVCGQCQCYVGWI 499


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 431 LAQHAXRWEEDYVPHEVI 484
           LA      E DY+PHE+I
Sbjct: 85  LADFTETLESDYIPHELI 102


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 400  FEVGDEVHVHHLLVVYNGEAVLN 332
            F + ++ H  H+LV Y    +LN
Sbjct: 2065 FGIDEKKHAQHVLVDYKSHQILN 2087


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 18/43 (41%), Positives = 20/43 (46%)
 Frame = +2

Query: 92  KLGLSYQKRQAQEAPSRT*TRGEAMGSSRQLHGCRRSLFRTGQ 220
           K G+S +   A   PSR  TR  A G  RQ H  R    R GQ
Sbjct: 100 KRGISQRSSDAGGEPSRRWTRSGATG-RRQPHPYRAG--RVGQ 139


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 18/43 (41%), Positives = 20/43 (46%)
 Frame = +2

Query: 92  KLGLSYQKRQAQEAPSRT*TRGEAMGSSRQLHGCRRSLFRTGQ 220
           K G+S +   A   PSR  TR  A G  RQ H  R    R GQ
Sbjct: 100 KRGISQRSSDAGGEPSRRWTRSGATG-RRQPHPYRAG--RVGQ 139


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 741,484
Number of Sequences: 2352
Number of extensions: 15374
Number of successful extensions: 31
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)