Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1278
(372 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q01FF9 Cluster: Histone H4; n=1; Ostreococcus tauri|Rep... 110 9e-24
UniRef50_A3BZ47 Cluster: Histone H4; n=2; Eukaryota|Rep: Histone... 109 1e-23
UniRef50_UPI000066070E Cluster: Homolog of Homo sapiens "H2A his... 109 2e-23
UniRef50_UPI000065E2E3 Cluster: Homolog of Homo sapiens "Histone... 109 2e-23
UniRef50_Q4SKJ3 Cluster: Histone H4; n=3; Euteleostomi|Rep: Hist... 109 2e-23
UniRef50_P62805 Cluster: Histone H4; n=364; root|Rep: Histone H4... 109 2e-23
UniRef50_A7SHX4 Cluster: Predicted protein; n=9; Nematostella ve... 108 3e-23
UniRef50_P80739 Cluster: Histone H4; n=143; root|Rep: Histone H4... 89 2e-17
UniRef50_UPI0000660B5F Cluster: H4 histone family, member L; n=1... 89 3e-17
UniRef50_A4QW60 Cluster: Histone H4; n=1; Magnaporthe grisea|Rep... 75 4e-13
UniRef50_A4HNK8 Cluster: Histone h4; n=1; Leishmania braziliensi... 74 1e-12
UniRef50_Q4QFI3 Cluster: Histone h4; n=19; Leishmania|Rep: Histo... 73 2e-12
UniRef50_A6S8Z2 Cluster: Histone H4; n=1; Botryotinia fuckeliana... 66 3e-10
UniRef50_Q4RFZ6 Cluster: Chromosome undetermined SCAF15108, whol... 65 4e-10
UniRef50_UPI0000E47984 Cluster: PREDICTED: similar to RNA bindin... 64 8e-10
UniRef50_Q8TA36 Cluster: Histone H4; n=1; Heterodera glycines|Re... 58 4e-08
UniRef50_Q0D5M3 Cluster: Os07g0549900 protein; n=1; Oryza sativa... 58 5e-08
UniRef50_Q0J1K7 Cluster: Os09g0433500 protein; n=10; Eukaryota|R... 58 7e-08
UniRef50_A0BJB4 Cluster: Histone H4; n=2; Paramecium tetraurelia... 56 2e-07
UniRef50_Q7RX38 Cluster: Histone H4; n=3; Sordariomycetes|Rep: H... 56 2e-07
UniRef50_Q00YR9 Cluster: Chromosome 11 contig 1, DNA sequence; n... 54 6e-07
UniRef50_A2RAE9 Cluster: Histone H4; n=1; Aspergillus niger|Rep:... 54 8e-07
UniRef50_A4HBJ5 Cluster: Histone H4; n=1; Leishmania braziliensi... 53 1e-06
UniRef50_Q0UHL1 Cluster: Histone H4; n=1; Phaeosphaeria nodorum|... 53 2e-06
UniRef50_A4VCP0 Cluster: Putative uncharacterized protein; n=1; ... 52 3e-06
UniRef50_A2Q2T8 Cluster: Histone H4; Histone-fold; n=1; Medicago... 51 6e-06
UniRef50_Q6A1P4 Cluster: Histone H4; n=1; Euplotes vannus|Rep: H... 50 1e-05
UniRef50_A4HHY8 Cluster: Histone h4; n=1; Leishmania braziliensi... 48 7e-05
UniRef50_A6QZ47 Cluster: Predicted protein; n=1; Ajellomyces cap... 46 2e-04
UniRef50_A0CDN4 Cluster: Histone H4; n=2; Paramecium tetraurelia... 45 4e-04
UniRef50_Q8SQP4 Cluster: Histone H4; n=1; Encephalitozoon cunicu... 41 0.008
UniRef50_Q3LW75 Cluster: Histone H4; n=1; Bigelowiella natans|Re... 37 0.10
UniRef50_Q9TXG5 Cluster: Histone D=CORE histone H4 homolog; n=1;... 36 0.23
UniRef50_Q4Q9T7 Cluster: Putative uncharacterized protein; n=3; ... 35 0.54
UniRef50_Q9FMG4 Cluster: Similarity to splicing factor; n=6; Mag... 34 0.95
UniRef50_Q1DKH6 Cluster: Predicted protein; n=1; Coccidioides im... 34 0.95
UniRef50_UPI000023DBBD Cluster: hypothetical protein FG00701.1; ... 32 3.8
UniRef50_Q011A3 Cluster: Rel-associated pp40; n=1; Ostreococcus ... 32 3.8
UniRef50_UPI000155500C Cluster: PREDICTED: similar to vitellogen... 31 8.8
UniRef50_UPI0000D9DCE4 Cluster: PREDICTED: hypothetical protein;... 31 8.8
UniRef50_Q5YR34 Cluster: Putative uncharacterized protein; n=1; ... 31 8.8
UniRef50_Q6ZAY7 Cluster: Putative uncharacterized protein OJ1540... 31 8.8
>UniRef50_Q01FF9 Cluster: Histone H4; n=1; Ostreococcus tauri|Rep:
Histone H4 - Ostreococcus tauri
Length = 282
Score = 110 bits (264), Expect = 9e-24
Identities = 54/57 (94%), Positives = 54/57 (94%)
Frame = +3
Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTYTEHAR
Sbjct: 171 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAR 227
Score = 72.1 bits (169), Expect = 3e-12
Identities = 36/81 (44%), Positives = 48/81 (59%)
Frame = -2
Query: 266 RSSSGVFGVCDSVADHVFEEHFENAAGLXVYKTGDTFHSTXXSQXTDSRFXDALDVITQH 87
R S+ V GV + D V EEH E+A+GL V +T D +T SQ +D R DAL+V+ +
Sbjct: 40 RLSASVLGVGHGITDDVLEEHLEDASGLFVDETRDALDTTTASQASDRRLRDALNVVAKD 99
Query: 86 LPVTFSAPLSKTFASFTATGH 24
L VT A LS+T +FT H
Sbjct: 100 LAVTLGAALSETLTTFTTARH 120
Score = 56.4 bits (130), Expect = 2e-07
Identities = 29/40 (72%), Positives = 32/40 (80%), Gaps = 3/40 (7%)
Frame = +2
Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG*R---SFIDDFLFL 364
+RKTVTAMDVVYALKRQGRTLYGFG + SF+ FL L
Sbjct: 227 RRKTVTAMDVVYALKRQGRTLYGFGDAKRFSSFVSSFLTL 266
Score = 33.5 bits (73), Expect = 1.3
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -3
Query: 334 LTAETVQGATLAFQSVHNIHSGDGL 260
LTAE V+GA LA + V +IH GD L
Sbjct: 17 LTAEAVEGAALALERVDDIHGGDRL 41
>UniRef50_A3BZ47 Cluster: Histone H4; n=2; Eukaryota|Rep: Histone H4
- Oryza sativa subsp. japonica (Rice)
Length = 285
Score = 109 bits (263), Expect = 1e-23
Identities = 53/57 (92%), Positives = 54/57 (94%)
Frame = +3
Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLK+FLENVIRDAVTYTEHAR
Sbjct: 204 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHAR 260
Score = 56.0 bits (129), Expect = 2e-07
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 260 RRKTVTAMDVVYALKRQGRTLYGFGG 285
>UniRef50_UPI000066070E Cluster: Homolog of Homo sapiens "H2A
histone family, member X (H2AFX), mRNA; n=2; Takifugu
rubripes|Rep: Homolog of Homo sapiens "H2A histone
family, member X (H2AFX), mRNA - Takifugu rubripes
Length = 325
Score = 109 bits (261), Expect = 2e-23
Identities = 53/57 (92%), Positives = 54/57 (94%)
Frame = +3
Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTYTEHA+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAK 78
Score = 56.0 bits (129), Expect = 2e-07
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78 KRKTVTAMDVVYALKRQGRTLYGFGG 103
>UniRef50_UPI000065E2E3 Cluster: Homolog of Homo sapiens "Histone 1,
H2ai; n=2; Takifugu rubripes|Rep: Homolog of Homo
sapiens "Histone 1, H2ai - Takifugu rubripes
Length = 370
Score = 109 bits (261), Expect = 2e-23
Identities = 53/57 (92%), Positives = 54/57 (94%)
Frame = +3
Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTYTEHA+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAK 78
Score = 58.4 bits (135), Expect = 4e-08
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +2
Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG*RSFIDDFLFL 364
+RKTVTAMDVVYALKRQGRTLYGFGG ++ D F L
Sbjct: 78 KRKTVTAMDVVYALKRQGRTLYGFGGFINYTDLFRLL 114
>UniRef50_Q4SKJ3 Cluster: Histone H4; n=3; Euteleostomi|Rep: Histone
H4 - Tetraodon nigroviridis (Green puffer)
Length = 234
Score = 109 bits (261), Expect = 2e-23
Identities = 53/57 (92%), Positives = 54/57 (94%)
Frame = +3
Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTYTEHA+
Sbjct: 153 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAK 209
Score = 56.0 bits (129), Expect = 2e-07
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 209 KRKTVTAMDVVYALKRQGRTLYGFGG 234
>UniRef50_P62805 Cluster: Histone H4; n=364; root|Rep: Histone H4 -
Homo sapiens (Human)
Length = 103
Score = 109 bits (261), Expect = 2e-23
Identities = 53/57 (92%), Positives = 54/57 (94%)
Frame = +3
Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTYTEHA+
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAK 78
Score = 56.0 bits (129), Expect = 2e-07
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78 KRKTVTAMDVVYALKRQGRTLYGFGG 103
>UniRef50_A7SHX4 Cluster: Predicted protein; n=9; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 222
Score = 108 bits (260), Expect = 3e-23
Identities = 52/57 (91%), Positives = 54/57 (94%)
Frame = +3
Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
+LRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTYTEHA+
Sbjct: 22 ILRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAK 78
Score = 43.6 bits (98), Expect = 0.001
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 254 QRKTVTAMDVVYALKRQGRTL 316
+RKTVTAMDVVYALKRQGRTL
Sbjct: 78 KRKTVTAMDVVYALKRQGRTL 98
>UniRef50_P80739 Cluster: Histone H4; n=143; root|Rep: Histone H4 -
Euplotes crassus
Length = 107
Score = 89.0 bits (211), Expect = 2e-17
Identities = 42/56 (75%), Positives = 48/56 (85%)
Frame = +3
Query: 90 LRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
LR+ I G+TKPAIR LAR GGVKRIS L+Y ETR VLK FLE+VIRD+VTYTEHA+
Sbjct: 27 LRETILGVTKPAIRRLARRGGVKRISSLVYEETRAVLKGFLESVIRDSVTYTEHAK 82
Score = 53.6 bits (123), Expect = 1e-06
Identities = 23/26 (88%), Positives = 26/26 (100%)
Frame = +2
Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
+RKTVTA+DVVYALKRQG+TLYGFGG
Sbjct: 82 KRKTVTALDVVYALKRQGKTLYGFGG 107
>UniRef50_UPI0000660B5F Cluster: H4 histone family, member L; n=1;
Takifugu rubripes|Rep: H4 histone family, member L -
Takifugu rubripes
Length = 220
Score = 88.6 bits (210), Expect = 3e-17
Identities = 47/57 (82%), Positives = 48/57 (84%)
Frame = +3
Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
VLRDNIQGIT AR GGVKRISGLIY ETRGVLKVFLENVIRDAVTYTEHA+
Sbjct: 146 VLRDNIQGIT-------ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAK 195
Score = 56.0 bits (129), Expect = 2e-07
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 195 KRKTVTAMDVVYALKRQGRTLYGFGG 220
>UniRef50_A4QW60 Cluster: Histone H4; n=1; Magnaporthe grisea|Rep:
Histone H4 - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 144
Score = 74.9 bits (176), Expect = 4e-13
Identities = 33/59 (55%), Positives = 43/59 (72%)
Frame = +3
Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHARGR 263
+ RD I GITK IR LAR GGVKR+SG+IY ETRG +K +LE ++RD V Y ++ R +
Sbjct: 50 IQRDTISGITKGDIRRLARRGGVKRLSGMIYDETRGAMKQYLERILRDCVAYCDYRRAK 108
Score = 36.7 bits (81), Expect = 0.13
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 251 RQRKTVTAMDVVYALKRQGRTLYGF 325
R+ KTVT DV++ALKR GR +YGF
Sbjct: 105 RRAKTVTVHDVLHALKRIGRPIYGF 129
>UniRef50_A4HNK8 Cluster: Histone h4; n=1; Leishmania
braziliensis|Rep: Histone h4 - Leishmania braziliensis
Length = 145
Score = 73.7 bits (173), Expect = 1e-12
Identities = 33/57 (57%), Positives = 44/57 (77%)
Frame = +3
Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
VLRDNI GIT+ +R +AR GGVKRISG +Y E R VLK ++E+++R + YTE+AR
Sbjct: 65 VLRDNIHGITRGCVRRMARRGGVKRISGDLYEEVRRVLKAYVEDIVRCSTAYTEYAR 121
Score = 34.3 bits (75), Expect = 0.72
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2
Query: 254 QRKTVTAMDVVYALKRQGRTLYGF 325
++KTVTA DVV AL+++G LYG+
Sbjct: 121 RKKTVTAADVVNALRKRGHILYGY 144
>UniRef50_Q4QFI3 Cluster: Histone h4; n=19; Leishmania|Rep: Histone
h4 - Leishmania major
Length = 100
Score = 72.9 bits (171), Expect = 2e-12
Identities = 32/57 (56%), Positives = 45/57 (78%)
Frame = +3
Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
VLRDNI+GIT+ ++R +AR GGVKRIS +Y E R VLK ++E+++R + YTE+AR
Sbjct: 20 VLRDNIRGITRGSVRRMARRGGVKRISSEVYEEVRRVLKAYVEDIVRCSTAYTEYAR 76
Score = 35.9 bits (79), Expect = 0.23
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +2
Query: 254 QRKTVTAMDVVYALKRQGRTLYGF 325
++KTVTA DVV AL++QG LYG+
Sbjct: 76 RKKTVTACDVVNALRKQGHILYGY 99
>UniRef50_A6S8Z2 Cluster: Histone H4; n=1; Botryotinia fuckeliana
B05.10|Rep: Histone H4 - Botryotinia fuckeliana B05.10
Length = 138
Score = 65.7 bits (153), Expect = 3e-10
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +3
Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
VL+DNI GITK IR LAR GGVKRIS +IY + R +K L +V++D V EH++
Sbjct: 54 VLKDNINGITKGDIRRLARRGGVKRISSMIYGDVREAIKSRLNDVLKDCVALVEHSK 110
Score = 39.9 bits (89), Expect = 0.014
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +2
Query: 254 QRKTVTAMDVVYALKRQGRTLYGF 325
+RKTVT DV++AL+RQGR +YGF
Sbjct: 110 KRKTVTVNDVIWALRRQGRPIYGF 133
>UniRef50_Q4RFZ6 Cluster: Chromosome undetermined SCAF15108, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF15108,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 149
Score = 64.9 bits (151), Expect = 4e-10
Identities = 31/68 (45%), Positives = 40/68 (58%)
Frame = +2
Query: 59 KGGR*TSQEGVA**HPGHHXTGYPSFGSXRWSETYLRSYIXRDPRRSQSVPRKRDPRRCH 238
KGG +G HPGHH T +P GS R E +LR + DPR ++ VP +RDPRR H
Sbjct: 13 KGGAKRHPQGPPRQHPGHHQTRHPPPGSARRREAHLRPDLRGDPRGAEGVPGERDPRRRH 72
Query: 239 IHRTRQRK 262
+H RQ +
Sbjct: 73 LHGARQEE 80
>UniRef50_UPI0000E47984 Cluster: PREDICTED: similar to RNA binding
motif, single stranded interacting protein; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
RNA binding motif, single stranded interacting protein -
Strongylocentrotus purpuratus
Length = 329
Score = 64.1 bits (149), Expect = 8e-10
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = +3
Query: 159 RISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
RISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 118 RISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 150
>UniRef50_Q8TA36 Cluster: Histone H4; n=1; Heterodera glycines|Rep:
Histone H4 - Heterodera glycines (Soybean cyst nematode
worm)
Length = 170
Score = 58.4 bits (135), Expect = 4e-08
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +3
Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
+LRD+ + ITK +I LAR GV RI+ +Y E R L+ +LE +IRDA Y +H R
Sbjct: 20 LLRDSAKKITKASILRLARRAGVARINARVYDEVRAALRSYLETIIRDAAIYCQHER 76
Score = 35.5 bits (78), Expect = 0.31
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2
Query: 254 QRKTVTAMDVVYALKRQGRTLYGF 325
+RKT+ + DVV+AL+RQG +YGF
Sbjct: 76 RRKTMKSRDVVHALRRQGNLMYGF 99
>UniRef50_Q0D5M3 Cluster: Os07g0549900 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os07g0549900 protein -
Oryza sativa subsp. japonica (Rice)
Length = 253
Score = 58.0 bits (134), Expect = 5e-08
Identities = 27/65 (41%), Positives = 36/65 (55%)
Frame = +2
Query: 59 KGGR*TSQEGVA**HPGHHXTGYPSFGSXRWSETYLRSYIXRDPRRSQSVPRKRDPRRCH 238
+G R EG HPG H G P G E +L +++ DPR +Q +PR+R PRR H
Sbjct: 142 QGRREAPPEGAPRQHPGDHEAGDPEAGEEGRGEAHLGAHLRGDPRGAQDLPRERHPRRRH 201
Query: 239 IHRTR 253
+HR R
Sbjct: 202 LHRAR 206
>UniRef50_Q0J1K7 Cluster: Os09g0433500 protein; n=10; Eukaryota|Rep:
Os09g0433500 protein - Oryza sativa subsp. japonica
(Rice)
Length = 781
Score = 57.6 bits (133), Expect = 7e-08
Identities = 28/60 (46%), Positives = 34/60 (56%)
Frame = -2
Query: 260 SSGVFGVCDSVADHVFEEHFENAAGLXVYKTGDTFHSTXXSQXTDSRFXDALDVITQHLP 81
++GV GV D VAD V EE E+ AGL V + D H Q D R D LDV+ +HLP
Sbjct: 352 AAGVLGVGDGVADDVLEEDLEHPAGLLVDEPRDALHPAPPRQPPDRRLRDPLDVVAEHLP 411
Score = 34.7 bits (76), Expect = 0.54
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -3
Query: 334 LTAETVQGATLAFQSVHNIHSGDGL 260
L AE V+GA LA + V ++H GDGL
Sbjct: 327 LAAEAVEGAALALEGVDDVHGGDGL 351
>UniRef50_A0BJB4 Cluster: Histone H4; n=2; Paramecium
tetraurelia|Rep: Histone H4 - Paramecium tetraurelia
Length = 107
Score = 56.4 bits (130), Expect = 2e-07
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = +3
Query: 105 QGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
Q IT IR LAR GGVKRIS Y TR V+ FL ++++DA+ YTEHA+
Sbjct: 32 QHITNGDIRRLARRGGVKRISSDSYPTTRDVIVNFLSSLVKDAIIYTEHAQ 82
Score = 35.1 bits (77), Expect = 0.41
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +2
Query: 254 QRKTVTAMDVVYALKRQGRTL 316
QR TV AMDVVYALK+ GR L
Sbjct: 82 QRNTVQAMDVVYALKKYGRNL 102
>UniRef50_Q7RX38 Cluster: Histone H4; n=3; Sordariomycetes|Rep:
Histone H4 - Neurospora crassa
Length = 155
Score = 56.0 bits (129), Expect = 2e-07
Identities = 27/51 (52%), Positives = 32/51 (62%)
Frame = +3
Query: 111 ITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHARGR 263
I K IR + R GGVKRIS IY E R LK L+ ++RD VTYTEH +
Sbjct: 47 IIKDTIRGITRRGGVKRISAGIYDEIRAALKERLQMILRDCVTYTEHRHAK 97
Score = 35.5 bits (78), Expect = 0.31
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 251 RQRKTVTAMDVVYALKRQGRTLYGF 325
R KTVT DV++AL+R G+ +YGF
Sbjct: 94 RHAKTVTVTDVIFALRRIGKPIYGF 118
>UniRef50_Q00YR9 Cluster: Chromosome 11 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 11 contig 1, DNA
sequence - Ostreococcus tauri
Length = 180
Score = 54.4 bits (125), Expect = 6e-07
Identities = 30/61 (49%), Positives = 37/61 (60%)
Frame = +1
Query: 37 VKEAKVLERGALNVTGRCCVITSRASXNRLSVXWLXXVE*NVSPVLYTKRPAAFSKCSSK 216
VK +V ER A +VT R T +AS +R S WL V + SPV TKRP A S+CSS+
Sbjct: 23 VKVVRVSERAAPSVTARSFATTFKASRSRRSDAWLAVVVSSASPVSSTKRPEASSRCSSR 82
Query: 217 T 219
T
Sbjct: 83 T 83
>UniRef50_A2RAE9 Cluster: Histone H4; n=1; Aspergillus niger|Rep:
Histone H4 - Aspergillus niger
Length = 97
Score = 54.0 bits (124), Expect = 8e-07
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = +3
Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTE 248
+LR+NI GIT+P+IR LAR GGV RIS +Y E R +K L +IR + E
Sbjct: 23 LLRNNIDGITRPSIRRLARRGGVIRISADVYPEVRKTVKNRLTEIIRQIILVME 76
>UniRef50_A4HBJ5 Cluster: Histone H4; n=1; Leishmania
braziliensis|Rep: Histone H4 - Leishmania braziliensis
Length = 106
Score = 53.2 bits (122), Expect = 1e-06
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +3
Query: 135 LARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
+AR GGVKRISG +Y E R VLK ++E+++R + YTE+AR
Sbjct: 1 MARRGGVKRISGDLYEEVRRVLKAYVEDIVRCSTAYTEYAR 41
>UniRef50_Q0UHL1 Cluster: Histone H4; n=1; Phaeosphaeria
nodorum|Rep: Histone H4 - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 238
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +3
Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTE 248
+ RD I G+TK IR LAR GGVKRI+ IY + R L L ++++DA+ E
Sbjct: 151 IQRDTIYGVTKGDIRRLARRGGVKRIAATIYDDIRQALNDRLRSILKDAIAVVE 204
Score = 36.3 bits (80), Expect = 0.18
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 257 RKTVTAMDVVYALKRQGRTLYGF 325
RKT++ D+++ L RQGR LYGF
Sbjct: 208 RKTISVTDIIFVLNRQGRQLYGF 230
>UniRef50_A4VCP0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 193
Score = 52.0 bits (119), Expect = 3e-06
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = -2
Query: 260 SSGVFGVCDSVADHVFEEHFENAAGLXVYKTGDTFHSTXXSQXTDSRFXDALDVITQHLP 81
SS VF V DSV+++VF+E ++ +G+ V + G++ ++T SQ +DS + + L
Sbjct: 73 SSSVFSVSDSVSNNVFQERLQDLSGVVVNERGNSLNTTSSSQSSDSGLSNTFNGSLVRLS 132
Query: 80 -VTFSAPLSKTFASFTATGHLDELL 9
V+ + + TF +FT TGH + L
Sbjct: 133 GVSLGSDFTHTFTTFT-TGHFCKFL 156
>UniRef50_A2Q2T8 Cluster: Histone H4; Histone-fold; n=1; Medicago
truncatula|Rep: Histone H4; Histone-fold - Medicago
truncatula (Barrel medic)
Length = 289
Score = 51.2 bits (117), Expect = 6e-06
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = +3
Query: 141 RXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
+ G K LIY E RGVLK+FL+N I DAVTYTEHAR
Sbjct: 13 KVGREKETLVLIYEEIRGVLKIFLQNEICDAVTYTEHAR 51
Score = 35.9 bits (79), Expect = 0.23
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +2
Query: 254 QRKTVTAMDVVYALKRQGRTLYGFG 328
+RKT+TAMDVVY QGRTLY FG
Sbjct: 51 RRKTLTAMDVVY----QGRTLYSFG 71
>UniRef50_Q6A1P4 Cluster: Histone H4; n=1; Euplotes vannus|Rep:
Histone H4 - Euplotes vannus
Length = 125
Score = 50.4 bits (115), Expect = 1e-05
Identities = 22/52 (42%), Positives = 35/52 (67%)
Frame = +3
Query: 102 IQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
+ GI+ A++ LAR GG+KRIS +Y E R + VFLE ++ D+ +Y + A+
Sbjct: 31 VSGISDGAMKRLARRGGIKRISADVYEELRKIYIVFLEKLVEDSYSYADCAK 82
Score = 41.9 bits (94), Expect = 0.004
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2
Query: 254 QRKTVTAMDVVYALKRQGRTLYGF 325
+RKT+ +DVVYALKRQGR LYG+
Sbjct: 82 KRKTIIPLDVVYALKRQGRNLYGY 105
>UniRef50_A4HHY8 Cluster: Histone h4; n=1; Leishmania
braziliensis|Rep: Histone h4 - Leishmania braziliensis
Length = 131
Score = 47.6 bits (108), Expect = 7e-05
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +3
Query: 126 IRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
IR +AR GVKRISG +Y E R VLK ++E+++R + E+AR
Sbjct: 34 IRRMARCDGVKRISGDLYEEVRRVLKAYVEDIVRCSAACIEYAR 77
>UniRef50_A6QZ47 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 112
Score = 46.4 bits (105), Expect = 2e-04
Identities = 28/57 (49%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 90 LRDNIQGITKPA-IRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
LRDNI GI KP IR LAR GGV RI IY R V+ L +IR V E ++
Sbjct: 27 LRDNIMGIAKPTTIRRLARRGGVIRIQKDIYDTVRSVVLERLREIIRRLVNLLEGSK 83
>UniRef50_A0CDN4 Cluster: Histone H4; n=2; Paramecium
tetraurelia|Rep: Histone H4 - Paramecium tetraurelia
Length = 116
Score = 45.2 bits (102), Expect = 4e-04
Identities = 22/55 (40%), Positives = 37/55 (67%)
Frame = +3
Query: 111 ITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHARGRPSPL 275
I+ IR LAR GGVKRIS +Y ++ +K+++ N++RD++ Y ++ GR + L
Sbjct: 43 ISNGDIRRLARRGGVKRISSDVYELSKLYMKLYISNILRDSMIYANYS-GRATIL 96
>UniRef50_Q8SQP4 Cluster: Histone H4; n=1; Encephalitozoon
cuniculi|Rep: Histone H4 - Encephalitozoon cuniculi
Length = 103
Score = 40.7 bits (91), Expect = 0.008
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 111 ITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
I+KPAIR +AR GV+R+ G + E + ++ + + A Y HA+
Sbjct: 32 ISKPAIRRIARRAGVRRVGGGCFKEINNAAREYIRDTLSIACIYATHAK 80
>UniRef50_Q3LW75 Cluster: Histone H4; n=1; Bigelowiella natans|Rep:
Histone H4 - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 95
Score = 37.1 bits (82), Expect = 0.10
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 111 ITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEH 251
I+K +I+ LAR G+KR+S IY E + FL +++D + + +
Sbjct: 23 ISKLSIKRLARKSGIKRMSCTIYAEINKFIVEFLTKIVKDIIIFCRY 69
>UniRef50_Q9TXG5 Cluster: Histone D=CORE histone H4 homolog; n=1;
Trypanosoma brucei|Rep: Histone D=CORE histone H4
homolog - Trypanosoma brucei
Length = 67
Score = 35.9 bits (79), Expect = 0.23
Identities = 14/24 (58%), Positives = 22/24 (91%)
Frame = +2
Query: 254 QRKTVTAMDVVYALKRQGRTLYGF 325
++KTVTA+DVV AL+++G+ LYG+
Sbjct: 43 RKKTVTAVDVVNALRKRGKILYGY 66
>UniRef50_Q4Q9T7 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 750
Score = 34.7 bits (76), Expect = 0.54
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 155 ETYLRSYIXRDPRRSQSVPRKRDPRRCHIHRTRQRKTVTAMDVVYALKRQGR 310
+T +++ RDP Q VPR ++P C +HR R + V+ + G+
Sbjct: 467 DTSATNFMYRDPLMEQLVPRTQEPITCFVHRVRDLMYHHGVSVIMVVGGSGQ 518
>UniRef50_Q9FMG4 Cluster: Similarity to splicing factor; n=6;
Magnoliophyta|Rep: Similarity to splicing factor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 303
Score = 33.9 bits (74), Expect = 0.95
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2
Query: 182 RDPRRSQSVPRKRDPRRCHIHRTRQR 259
R PRRS+S PR+R PRR R R R
Sbjct: 125 RSPRRSRSPPRRRSPRRSRSPRRRSR 150
>UniRef50_Q1DKH6 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 131
Score = 33.9 bits (74), Expect = 0.95
Identities = 30/72 (41%), Positives = 32/72 (44%), Gaps = 20/72 (27%)
Frame = +3
Query: 93 RDNIQGITKPAIRX--------------------LARXGGVKRISGLIYXETRGVLKVFL 212
RDNI GIT+PAIR LAR GGVKRI IY R VL L
Sbjct: 28 RDNIIGITRPAIRYVRMLAASLSRTSSPFSPFIRLARRGGVKRIQKSIYDTAREVLLDRL 87
Query: 213 ENVIRDAVTYTE 248
+IR V E
Sbjct: 88 RMIIRQIVEVLE 99
>UniRef50_UPI000023DBBD Cluster: hypothetical protein FG00701.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00701.1 - Gibberella zeae PH-1
Length = 357
Score = 31.9 bits (69), Expect = 3.8
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 160 VSPVLYTKRPAAFSKCSSKT*SATLSHTPNTPEEDRHRYGCCVRSETPRSHP 315
VSPV T R A+ + C + + SH+P P + R YG R+ RS P
Sbjct: 226 VSPVEQTDRRASVA-CLQPPANISRSHSPGYPRDRRSSYGAIPRASHCRSPP 276
>UniRef50_Q011A3 Cluster: Rel-associated pp40; n=1; Ostreococcus
tauri|Rep: Rel-associated pp40 - Ostreococcus tauri
Length = 614
Score = 31.9 bits (69), Expect = 3.8
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +2
Query: 104 PGHHXTGYPSFGSXRWSETYLRSYIXRDPRRSQSVPRKRDPRRCHIHRTRQRKTVTAMD 280
PG++ P F R RS R PRR +S R RD R HR+R R + + D
Sbjct: 484 PGYYSYDNPGFDDRRSPSRRDRSR-DRSPRRDRSRDRSRDRDRRSRHRSRDRGSRSRRD 541
>UniRef50_UPI000155500C Cluster: PREDICTED: similar to vitellogenin,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to vitellogenin, partial - Ornithorhynchus
anatinus
Length = 958
Score = 30.7 bits (66), Expect = 8.8
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 172 LYTKRPAAFSKCSSKT*SATLSHTPNTPEEDRHR 273
+++K +A S SSKT S T S +P+ DRHR
Sbjct: 425 IHSKSSSASSMTSSKTSSLTSSSSPSVAGRDRHR 458
>UniRef50_UPI0000D9DCE4 Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 274
Score = 30.7 bits (66), Expect = 8.8
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 164 LRSYIXRD-PRRSQSVPRKRDPRRCHIHRTRQRKTVTAMD 280
LR + RD P+ Q PR+R P RC R R V A D
Sbjct: 173 LRKCLHRDAPQGQQPGPRRRRPARCRARRGHSRLPVFAED 212
>UniRef50_Q5YR34 Cluster: Putative uncharacterized protein; n=1;
Nocardia farcinica|Rep: Putative uncharacterized protein
- Nocardia farcinica
Length = 571
Score = 30.7 bits (66), Expect = 8.8
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 224 PRRCHIHRTRQRKTVTAMDVVYA 292
PRR H+HR+RQR V A+ ++ A
Sbjct: 252 PRRVHVHRSRQRAGVIAVALIVA 274
>UniRef50_Q6ZAY7 Cluster: Putative uncharacterized protein
OJ1540_G08.6; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1540_G08.6 - Oryza sativa subsp. japonica (Rice)
Length = 240
Score = 30.7 bits (66), Expect = 8.8
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 188 PRRSQSVPRKRDPRRC-HIHRTRQRKTVTA 274
PRR + PR+R RRC H H R+R T A
Sbjct: 148 PRRLRPGPRRRTTRRCPHRHGPRRRSTAPA 177
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 324,694,151
Number of Sequences: 1657284
Number of extensions: 5658830
Number of successful extensions: 15235
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 14823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15229
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 13594373344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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