Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1278
         (372 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   1.0  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   4.1  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   5.4  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 306 PWRFRAYTTSIAVTVFL 256
           PW  RAY T  +++VF+
Sbjct: 197 PWGKRAYVTWYSISVFM 213


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = +1

Query: 187 PAAFSKCSSKT*SATLSHTPNTPEEDRHRYGCCVRSETPRSHP 315
           P  +S+   +   +     P T  ED+ R     R  T R+ P
Sbjct: 200 PRQYSQSRGRHNQSRSKRQPKTGREDQTRRNPYYRPRTSRTEP 242


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +2

Query: 149 WSETYLRSYIXRDPRRSQSVPRKRDPRRCH-IHRTRQ 256
           WS++ L   +   P R     R R PR  H  H TR+
Sbjct: 234 WSKSKLLIPVGHIPIRQCDDHRDRPPRHFHEEHDTRR 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,005
Number of Sequences: 336
Number of extensions: 1291
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7722305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)