BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1278 (372 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 10_08_0780 - 20500344-20500655 109 5e-25 09_06_0213 - 21610887-21611198 109 5e-25 09_04_0227 + 15861410-15861721 109 5e-25 07_03_0825 + 21773710-21774021 109 5e-25 05_05_0150 + 22758060-22758371 109 5e-25 05_05_0128 - 22591720-22592031 109 5e-25 04_04_0926 - 29462363-29462674 109 5e-25 03_01_0134 + 1060551-1060862 109 5e-25 02_05_0333 - 28012829-28013140 109 5e-25 01_06_1262 + 35833882-35834193 109 5e-25 05_05_0130 - 22598744-22599043,22599296-22599307 90 6e-19 03_01_0245 + 1916718-1917443,1917534-1917719 29 0.88 05_04_0209 - 19073147-19074041,19074117-19074163,19074258-190744... 29 1.2 06_01_1181 + 10148653-10149405 28 2.7 03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 27 3.6 02_05_0591 - 30183105-30183869 27 3.6 01_02_0078 - 10894871-10895841,10897268-10898426 27 3.6 05_04_0077 - 17712043-17712246,17712487-17712522,17712746-177129... 27 4.7 11_04_0444 + 17816207-17817436 27 6.2 08_02_0823 + 21557111-21557292,21557391-21557473,21557722-215578... 27 6.2 07_03_0999 - 23216665-23217419,23217626-23217956 27 6.2 06_03_0334 - 19660526-19661755 27 6.2 04_04_0206 + 23595268-23595279,23595475-23596317,23597037-235970... 27 6.2 04_03_0320 - 14316934-14318550 26 8.2 01_06_1284 + 35994595-35995074 26 8.2 >10_08_0780 - 20500344-20500655 Length = 103 Score = 109 bits (263), Expect = 5e-25 Identities = 53/57 (92%), Positives = 54/57 (94%) Frame = +3 Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257 VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLK+FLENVIRDAVTYTEHAR Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHAR 78 Score = 56.0 bits (129), Expect = 9e-09 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2 Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331 +RKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 78 RRKTVTAMDVVYALKRQGRTLYGFGG 103 >09_06_0213 - 21610887-21611198 Length = 103 Score = 109 bits (263), Expect = 5e-25 Identities = 53/57 (92%), Positives = 54/57 (94%) Frame = +3 Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257 VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLK+FLENVIRDAVTYTEHAR Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHAR 78 Score = 56.0 bits (129), Expect = 9e-09 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2 Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331 +RKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 78 RRKTVTAMDVVYALKRQGRTLYGFGG 103 >09_04_0227 + 15861410-15861721 Length = 103 Score = 109 bits (263), Expect = 5e-25 Identities = 53/57 (92%), Positives = 54/57 (94%) Frame = +3 Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257 VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLK+FLENVIRDAVTYTEHAR Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHAR 78 Score = 56.0 bits (129), Expect = 9e-09 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2 Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331 +RKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 78 RRKTVTAMDVVYALKRQGRTLYGFGG 103 >07_03_0825 + 21773710-21774021 Length = 103 Score = 109 bits (263), Expect = 5e-25 Identities = 53/57 (92%), Positives = 54/57 (94%) Frame = +3 Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257 VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLK+FLENVIRDAVTYTEHAR Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHAR 78 Score = 56.0 bits (129), Expect = 9e-09 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2 Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331 +RKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 78 RRKTVTAMDVVYALKRQGRTLYGFGG 103 >05_05_0150 + 22758060-22758371 Length = 103 Score = 109 bits (263), Expect = 5e-25 Identities = 53/57 (92%), Positives = 54/57 (94%) Frame = +3 Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257 VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLK+FLENVIRDAVTYTEHAR Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHAR 78 Score = 56.0 bits (129), Expect = 9e-09 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2 Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331 +RKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 78 RRKTVTAMDVVYALKRQGRTLYGFGG 103 >05_05_0128 - 22591720-22592031 Length = 103 Score = 109 bits (263), Expect = 5e-25 Identities = 53/57 (92%), Positives = 54/57 (94%) Frame = +3 Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257 VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLK+FLENVIRDAVTYTEHAR Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHAR 78 Score = 56.0 bits (129), Expect = 9e-09 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2 Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331 +RKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 78 RRKTVTAMDVVYALKRQGRTLYGFGG 103 >04_04_0926 - 29462363-29462674 Length = 103 Score = 109 bits (263), Expect = 5e-25 Identities = 53/57 (92%), Positives = 54/57 (94%) Frame = +3 Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257 VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLK+FLENVIRDAVTYTEHAR Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHAR 78 Score = 56.0 bits (129), Expect = 9e-09 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2 Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331 +RKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 78 RRKTVTAMDVVYALKRQGRTLYGFGG 103 >03_01_0134 + 1060551-1060862 Length = 103 Score = 109 bits (263), Expect = 5e-25 Identities = 53/57 (92%), Positives = 54/57 (94%) Frame = +3 Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257 VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLK+FLENVIRDAVTYTEHAR Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHAR 78 Score = 56.0 bits (129), Expect = 9e-09 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2 Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331 +RKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 78 RRKTVTAMDVVYALKRQGRTLYGFGG 103 >02_05_0333 - 28012829-28013140 Length = 103 Score = 109 bits (263), Expect = 5e-25 Identities = 53/57 (92%), Positives = 54/57 (94%) Frame = +3 Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257 VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLK+FLENVIRDAVTYTEHAR Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHAR 78 Score = 56.0 bits (129), Expect = 9e-09 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2 Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331 +RKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 78 RRKTVTAMDVVYALKRQGRTLYGFGG 103 >01_06_1262 + 35833882-35834193 Length = 103 Score = 109 bits (263), Expect = 5e-25 Identities = 53/57 (92%), Positives = 54/57 (94%) Frame = +3 Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257 VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLK+FLENVIRDAVTYTEHAR Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHAR 78 Score = 56.0 bits (129), Expect = 9e-09 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = +2 Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331 +RKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 78 RRKTVTAMDVVYALKRQGRTLYGFGG 103 >05_05_0130 - 22598744-22599043,22599296-22599307 Length = 103 Score = 89.8 bits (213), Expect = 6e-19 Identities = 43/56 (76%), Positives = 47/56 (83%) Frame = +3 Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHA 254 V R IQGI KP IR LAR GGVKRISGLIY ETRGVL++FL+NVI DA+TYTEHA Sbjct: 22 VFRGYIQGIAKPVIRRLARKGGVKRISGLIYKETRGVLEIFLKNVICDAITYTEHA 77 Score = 46.8 bits (106), Expect = 5e-06 Identities = 21/25 (84%), Positives = 22/25 (88%) Frame = +2 Query: 257 RKTVTAMDVVYALKRQGRTLYGFGG 331 RKTV AMDVVYALK QGRT+Y FGG Sbjct: 79 RKTVMAMDVVYALKLQGRTIYDFGG 103 >03_01_0245 + 1916718-1917443,1917534-1917719 Length = 303 Score = 29.5 bits (63), Expect = 0.88 Identities = 17/33 (51%), Positives = 17/33 (51%) Frame = +1 Query: 208 SSKT*SATLSHTPNTPEEDRHRYGCCVRSETPR 306 SS T SA TP TP R C VRS TPR Sbjct: 85 SSTTTSARTPRTPKTPCTPTARRLCGVRSRTPR 117 >05_04_0209 - 19073147-19074041,19074117-19074163,19074258-19074437, 19074839-19074955,19075105-19075227,19075391-19075776, 19076177-19076303,19077140-19077202,19078035-19078086, 19078189-19080023 Length = 1274 Score = 29.1 bits (62), Expect = 1.2 Identities = 19/51 (37%), Positives = 23/51 (45%) Frame = +3 Query: 87 VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVT 239 +LR T +R R V R S L+ GVL V LENV+ D T Sbjct: 120 LLRTTTAEPTPEGVRWTVRKD-VTRYSALLRSPPGGVLSVMLENVVNDKYT 169 >06_01_1181 + 10148653-10149405 Length = 250 Score = 27.9 bits (59), Expect = 2.7 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +2 Query: 230 RCHIHRTRQRKTVTAMDVVYALKRQG 307 RCH RKTVTA D+V+A+ R G Sbjct: 81 RCH---REHRKTVTAEDLVWAMDRLG 103 >03_05_0211 - 22020515-22020687,22020801-22020831,22022060-22022169, 22022715-22023102,22023344-22023397,22023739-22023849, 22023956-22024015,22024618-22024694,22026155-22026188, 22026267-22027235 Length = 668 Score = 27.5 bits (58), Expect = 3.6 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 Query: 178 TKRPAAFSKCSSKT*SATLSHTPNTPEEDRHRYGCCVRSETPR 306 T P SK SSKT S+ +S +PE+ + +S TP+ Sbjct: 507 TGTPRTVSKSSSKTPSSKVSKEKESPEDSAKVFSRKKKSVTPK 549 >02_05_0591 - 30183105-30183869 Length = 254 Score = 27.5 bits (58), Expect = 3.6 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +2 Query: 254 QRKTVTAMDVVYALKRQG 307 QRKT+TA DV++A+ R G Sbjct: 87 QRKTITAEDVLWAMSRLG 104 >01_02_0078 - 10894871-10895841,10897268-10898426 Length = 709 Score = 27.5 bits (58), Expect = 3.6 Identities = 14/46 (30%), Positives = 21/46 (45%) Frame = +2 Query: 185 DPRRSQSVPRKRDPRRCHIHRTRQRKTVTAMDVVYALKRQGRTLYG 322 +P + PR+R RR H+ R R+ V ++RQ R G Sbjct: 559 EPSALTAAPRRRQIRRVHVRIRRARRCQARHAVGELVRRQARHAVG 604 >05_04_0077 - 17712043-17712246,17712487-17712522,17712746-17712900, 17713431-17713591,17713950-17714110,17714188-17715657, 17715704-17715998,17716461-17717737,17717826-17718137, 17718223-17718356,17718449-17718521,17719994-17720059, 17720748-17720936 Length = 1510 Score = 27.1 bits (57), Expect = 4.7 Identities = 14/52 (26%), Positives = 29/52 (55%) Frame = +1 Query: 160 VSPVLYTKRPAAFSKCSSKT*SATLSHTPNTPEEDRHRYGCCVRSETPRSHP 315 +SP++ K + S+C ++T A+++ + P + ++ CC + ET R P Sbjct: 616 ISPIVVDKSASMPSRCKNETTEASMAVPASEPVD---QWVCCDKCETWRLLP 664 >11_04_0444 + 17816207-17817436 Length = 409 Score = 26.6 bits (56), Expect = 6.2 Identities = 15/58 (25%), Positives = 25/58 (43%) Frame = +2 Query: 128 PSFGSXRWSETYLRSYIXRDPRRSQSVPRKRDPRRCHIHRTRQRKTVTAMDVVYALKR 301 P G+ + SE Y ++ S KR+P++C H ++ VT Y+ R Sbjct: 182 PIKGNDKKSEQYWKAVAREFNSNMPSNGNKRNPKQCRTHWDNVKRDVTKFCGFYSKAR 239 >08_02_0823 + 21557111-21557292,21557391-21557473,21557722-21557810, 21557985-21558058,21558264-21558314,21558406-21558482, 21560206-21560900 Length = 416 Score = 26.6 bits (56), Expect = 6.2 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +2 Query: 185 DPRRSQSVPRKRDPRRCHIHRTRQRKTVT 271 +PRR Q PR+ PR C R+ + VT Sbjct: 32 EPRRRQKRPRRSAPRDCPSQRSSAFRGVT 60 >07_03_0999 - 23216665-23217419,23217626-23217956 Length = 361 Score = 26.6 bits (56), Expect = 6.2 Identities = 15/58 (25%), Positives = 25/58 (43%) Frame = +2 Query: 128 PSFGSXRWSETYLRSYIXRDPRRSQSVPRKRDPRRCHIHRTRQRKTVTAMDVVYALKR 301 P G+ + SE Y ++ S KR+P++C H ++ VT Y+ R Sbjct: 113 PIKGNDKKSEQYWKAVAREFNSNMPSNGNKRNPKQCRTHWDNVKRDVTKFCGFYSKAR 170 >06_03_0334 - 19660526-19661755 Length = 409 Score = 26.6 bits (56), Expect = 6.2 Identities = 15/58 (25%), Positives = 25/58 (43%) Frame = +2 Query: 128 PSFGSXRWSETYLRSYIXRDPRRSQSVPRKRDPRRCHIHRTRQRKTVTAMDVVYALKR 301 P G+ + SE Y ++ S KR+P++C H ++ VT Y+ R Sbjct: 182 PIKGNDKKSEQYWKAVAREFNSNMPSNGNKRNPKQCRTHWDNVKRDVTKFCGFYSKAR 239 >04_04_0206 + 23595268-23595279,23595475-23596317,23597037-23597088, 23597328-23597395,23597482-23597585,23597681-23597768, 23598405-23598722 Length = 494 Score = 26.6 bits (56), Expect = 6.2 Identities = 12/36 (33%), Positives = 17/36 (47%) Frame = +1 Query: 187 PAAFSKCSSKT*SATLSHTPNTPEEDRHRYGCCVRS 294 P S+ +ATL+H NTP D+ + C S Sbjct: 257 PTEMKHTDSRKSTATLAHVNNTPMTDKSKDSMCSSS 292 >04_03_0320 - 14316934-14318550 Length = 538 Score = 26.2 bits (55), Expect = 8.2 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +1 Query: 244 PNTPEEDRHRYGCCVRS 294 P PE D+ R CCVRS Sbjct: 443 PTFPELDKPRQNCCVRS 459 >01_06_1284 + 35994595-35995074 Length = 159 Score = 26.2 bits (55), Expect = 8.2 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Frame = +2 Query: 125 YPSF---GSXRWSETYLRSYIXRDPRRSQSVPRKRDPRRCH 238 +PSF G R S T L++ + DP + + +RD R H Sbjct: 44 FPSFQALGGHRTSHTRLQAKLLSDPAAAAAAAAERDRARVH 84 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,930,680 Number of Sequences: 37544 Number of extensions: 162501 Number of successful extensions: 510 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 493 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 510 length of database: 14,793,348 effective HSP length: 74 effective length of database: 12,015,092 effective search space used: 588739508 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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