Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1278
         (372 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.       102   4e-24
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   2.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   2.1  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   3.7  

>Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.
          Length = 91

 Score =  102 bits (245), Expect = 4e-24
 Identities = 50/57 (87%), Positives = 51/57 (89%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQG TKPAIR LAR GGVKRISGLIY E RGVLKVFLENVIRDAV YTEHA+
Sbjct: 22  VLRDNIQGTTKPAIRRLARRGGVKRISGLIYEERRGVLKVFLENVIRDAVAYTEHAK 78



 Score = 29.5 bits (63), Expect = 0.043
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYAL 295
           +RKTVTAMDVVYAL
Sbjct: 78  KRKTVTAMDVVYAL 91


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -2

Query: 173 KTGDTFHSTXXSQXTDSRFXDALDVITQHLPVTFSAPLSK 54
           K G +F  T  S  ++ +        T+ + VTF+ PL++
Sbjct: 492 KDGSSFPLTITSNDSNEQIITFSTASTEQMTVTFNRPLNQ 531


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -2

Query: 173 KTGDTFHSTXXSQXTDSRFXDALDVITQHLPVTFSAPLSK 54
           K G +F  T  S  ++ +        T+ + VTF+ PL++
Sbjct: 493 KDGSSFPLTITSNDSNEQIITFSTASTEQMTVTFNRPLNQ 532


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
 Frame = -2

Query: 221 HVFEEHFENAAGLXVYKTGDTF---HSTXXSQXTDSRFXDALDVITQHLPVTFSA 66
           H    H +N     V    DT    HS    Q  D+R    L  ++ + P T +A
Sbjct: 658 HHHHHHHQNPNDHFVNTNTDTIKRSHSAQLPQREDARSRTPLTAVSDYSPATAAA 712


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,095
Number of Sequences: 2352
Number of extensions: 5811
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28374390
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)