Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1278
         (372 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93388-10|CAB07657.1|  103|Caenorhabditis elegans Hypothetical p...   106   4e-24
Z83245-8|CAB05839.1|  103|Caenorhabditis elegans Hypothetical pr...   106   4e-24
Z83245-4|CAB05837.1|  103|Caenorhabditis elegans Hypothetical pr...   106   4e-24
Z83245-1|CAB05835.4|  103|Caenorhabditis elegans Hypothetical pr...   106   4e-24
Z82271-2|CAB05210.1|  103|Caenorhabditis elegans Hypothetical pr...   106   4e-24
Z81128-5|CAB03396.1|  103|Caenorhabditis elegans Hypothetical pr...   106   4e-24
Z73102-10|CAA97407.1|  103|Caenorhabditis elegans Hypothetical p...   106   4e-24
Z70750-7|CAA94742.1|  103|Caenorhabditis elegans Hypothetical pr...   106   4e-24
Z68336-1|CAA92734.1|  103|Caenorhabditis elegans Hypothetical pr...   106   4e-24
X15634-1|CAA33643.1|  103|Caenorhabditis elegans Histone protein...   106   4e-24
U64845-10|AAC48026.1|  103|Caenorhabditis elegans Histone protei...   106   4e-24
U64843-10|AAF98220.1|  103|Caenorhabditis elegans Histone protei...   106   4e-24
U64843-3|AAF98223.1|  103|Caenorhabditis elegans Histone protein...   106   4e-24
U58750-9|AAB00649.2|  103|Caenorhabditis elegans Histone protein...   106   4e-24
U41625-6|AAA83329.1|  103|Caenorhabditis elegans Histone protein...   106   4e-24
AF047656-2|AAC05101.1|  103|Caenorhabditis elegans Histone prote...   106   4e-24
AC024696-3|AAK84518.1|  103|Caenorhabditis elegans Histone prote...   106   4e-24
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ...    37   0.005
U80837-8|AAB37908.1|  412|Caenorhabditis elegans Hypothetical pr...    28   1.9  
U67949-1|AAL06028.2|  633|Caenorhabditis elegans Hypothetical pr...    27   5.7  
U28940-2|AAD31558.1|  239|Caenorhabditis elegans Transbilayer am...    27   5.7  
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am...    27   5.7  
Z81527-16|CAB04280.1|  915|Caenorhabditis elegans Hypothetical p...    26   7.5  
Z81110-8|CAB03263.1|  915|Caenorhabditis elegans Hypothetical pr...    26   7.5  

>Z93388-10|CAB07657.1|  103|Caenorhabditis elegans Hypothetical
           protein T10C6.14 protein.
          Length = 103

 Score =  106 bits (255), Expect = 4e-24
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 78



 Score = 56.0 bits (129), Expect = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
           +RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78  KRKTVTAMDVVYALKRQGRTLYGFGG 103


>Z83245-8|CAB05839.1|  103|Caenorhabditis elegans Hypothetical
           protein ZK131.8 protein.
          Length = 103

 Score =  106 bits (255), Expect = 4e-24
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 78



 Score = 56.0 bits (129), Expect = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
           +RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78  KRKTVTAMDVVYALKRQGRTLYGFGG 103


>Z83245-4|CAB05837.1|  103|Caenorhabditis elegans Hypothetical
           protein ZK131.4 protein.
          Length = 103

 Score =  106 bits (255), Expect = 4e-24
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 78



 Score = 56.0 bits (129), Expect = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
           +RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78  KRKTVTAMDVVYALKRQGRTLYGFGG 103


>Z83245-1|CAB05835.4|  103|Caenorhabditis elegans Hypothetical
           protein ZK131.1 protein.
          Length = 103

 Score =  106 bits (255), Expect = 4e-24
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 78



 Score = 56.0 bits (129), Expect = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
           +RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78  KRKTVTAMDVVYALKRQGRTLYGFGG 103


>Z82271-2|CAB05210.1|  103|Caenorhabditis elegans Hypothetical
           protein F54E12.3 protein.
          Length = 103

 Score =  106 bits (255), Expect = 4e-24
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 78



 Score = 56.0 bits (129), Expect = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
           +RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78  KRKTVTAMDVVYALKRQGRTLYGFGG 103


>Z81128-5|CAB03396.1|  103|Caenorhabditis elegans Hypothetical
           protein T23D8.5 protein.
          Length = 103

 Score =  106 bits (255), Expect = 4e-24
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 78



 Score = 56.0 bits (129), Expect = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
           +RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78  KRKTVTAMDVVYALKRQGRTLYGFGG 103


>Z73102-10|CAA97407.1|  103|Caenorhabditis elegans Hypothetical
           protein B0035.9 protein.
          Length = 103

 Score =  106 bits (255), Expect = 4e-24
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 78



 Score = 56.0 bits (129), Expect = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
           +RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78  KRKTVTAMDVVYALKRQGRTLYGFGG 103


>Z70750-7|CAA94742.1|  103|Caenorhabditis elegans Hypothetical
           protein C50F4.7 protein.
          Length = 103

 Score =  106 bits (255), Expect = 4e-24
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 78



 Score = 56.0 bits (129), Expect = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
           +RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78  KRKTVTAMDVVYALKRQGRTLYGFGG 103


>Z68336-1|CAA92734.1|  103|Caenorhabditis elegans Hypothetical
           protein F22B3.1 protein.
          Length = 103

 Score =  106 bits (255), Expect = 4e-24
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 78



 Score = 56.0 bits (129), Expect = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
           +RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78  KRKTVTAMDVVYALKRQGRTLYGFGG 103


>X15634-1|CAA33643.1|  103|Caenorhabditis elegans Histone protein
           protein.
          Length = 103

 Score =  106 bits (255), Expect = 4e-24
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 78



 Score = 56.0 bits (129), Expect = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
           +RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78  KRKTVTAMDVVYALKRQGRTLYGFGG 103


>U64845-10|AAC48026.1|  103|Caenorhabditis elegans Histone protein 5
           protein.
          Length = 103

 Score =  106 bits (255), Expect = 4e-24
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 78



 Score = 56.0 bits (129), Expect = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
           +RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78  KRKTVTAMDVVYALKRQGRTLYGFGG 103


>U64843-10|AAF98220.1|  103|Caenorhabditis elegans Histone protein
           18 protein.
          Length = 103

 Score =  106 bits (255), Expect = 4e-24
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 78



 Score = 56.0 bits (129), Expect = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
           +RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78  KRKTVTAMDVVYALKRQGRTLYGFGG 103


>U64843-3|AAF98223.1|  103|Caenorhabditis elegans Histone protein 28
           protein.
          Length = 103

 Score =  106 bits (255), Expect = 4e-24
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 78



 Score = 56.0 bits (129), Expect = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
           +RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78  KRKTVTAMDVVYALKRQGRTLYGFGG 103


>U58750-9|AAB00649.2|  103|Caenorhabditis elegans Histone protein 60
           protein.
          Length = 103

 Score =  106 bits (255), Expect = 4e-24
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 78



 Score = 56.0 bits (129), Expect = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
           +RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78  KRKTVTAMDVVYALKRQGRTLYGFGG 103


>U41625-6|AAA83329.1|  103|Caenorhabditis elegans Histone protein 38
           protein.
          Length = 103

 Score =  106 bits (255), Expect = 4e-24
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 78



 Score = 56.0 bits (129), Expect = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
           +RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78  KRKTVTAMDVVYALKRQGRTLYGFGG 103


>AF047656-2|AAC05101.1|  103|Caenorhabditis elegans Histone protein
           31 protein.
          Length = 103

 Score =  106 bits (255), Expect = 4e-24
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 78



 Score = 56.0 bits (129), Expect = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
           +RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78  KRKTVTAMDVVYALKRQGRTLYGFGG 103


>AC024696-3|AAK84518.1|  103|Caenorhabditis elegans Histone protein
           50 protein.
          Length = 103

 Score =  106 bits (255), Expect = 4e-24
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = +3

Query: 87  VLRDNIQGITKPAIRXLARXGGVKRISGLIYXETRGVLKVFLENVIRDAVTYTEHAR 257
           VLRDNIQGITKPAIR LAR GGVKRISGLIY ETRGVLKVFLENVIRDAVTY EHA+
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAK 78



 Score = 56.0 bits (129), Expect = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 254 QRKTVTAMDVVYALKRQGRTLYGFGG 331
           +RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 78  KRKTVTAMDVVYALKRQGRTLYGFGG 103


>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
            protein Y40C5A.3 protein.
          Length = 2344

 Score = 36.7 bits (81), Expect = 0.005
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = -2

Query: 248  FGVCDSVADHVFEEHFENAAGLXVYKTGDTFHSTXXSQXTDSRFXDALDVITQ 90
            F +  S+ D + +EH +++ G  V ++ D+  S+   + TD    D  DVIT+
Sbjct: 2285 FRISISITDDIPKEHLQDSTGFHVDQSRDSLDSSSSCETTDGWLGDTFDVITE 2337


>U80837-8|AAB37908.1|  412|Caenorhabditis elegans Hypothetical
           protein F07E5.9 protein.
          Length = 412

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +3

Query: 153 VKRISGLIYXETRGVLKVFLENVIRDAVTYTEHARGRPSPLWMLC 287
           +K+I G     T   L   LE  +  AVT  EH +  PSP+   C
Sbjct: 322 IKKIKGYKKFGTVAELLEALEKEMNGAVTKFEHTKKNPSPIKGTC 366


>U67949-1|AAL06028.2|  633|Caenorhabditis elegans Hypothetical
           protein F55A4.10 protein.
          Length = 633

 Score = 26.6 bits (56), Expect = 5.7
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -3

Query: 256 LACSVYVTASRITFSRNTLRTPRV-SXYIRPEIRFTP 149
           L CS+   + ++  ++NT  TPR  S  I  E+ F P
Sbjct: 9   LVCSISFCSGQVIIAKNTQVTPRCGSQLISIEVNFDP 45


>U28940-2|AAD31558.1|  239|Caenorhabditis elegans Transbilayer
           amphipath transporters(subfamily iv p-type atpase)
           protein 4, isoform c protein.
          Length = 239

 Score = 26.6 bits (56), Expect = 5.7
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = -2

Query: 218 VFEEHF-ENAAGLXVYKTGDTFHSTXXSQXTDSRFXDALDVITQHLPVTFSAPLSKTFAS 42
           V + HF ++A G+     G+ FHS   S+       + L +      V  + P +  FAS
Sbjct: 89  VTDSHFLQSAVGVVFGSDGNDFHSEKYSKDLTDNGFEKLVLPNVERAVQVTQPSTGGFAS 148

Query: 41  FTA 33
           F A
Sbjct: 149 FLA 151


>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
            amphipath transporters(subfamily iv p-type atpase)
            protein 4, isoform b protein.
          Length = 1454

 Score = 26.6 bits (56), Expect = 5.7
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = -2

Query: 218  VFEEHF-ENAAGLXVYKTGDTFHSTXXSQXTDSRFXDALDVITQHLPVTFSAPLSKTFAS 42
            V + HF ++A G+     G+ FHS   S+       + L +      V  + P +  FAS
Sbjct: 1304 VTDSHFLQSAVGVVFGSDGNDFHSEKYSKDLTDNGFEKLVLPNVERAVQVTQPSTGGFAS 1363

Query: 41   FTA 33
            F A
Sbjct: 1364 FLA 1366


>Z81527-16|CAB04280.1|  915|Caenorhabditis elegans Hypothetical
           protein T01D3.6b protein.
          Length = 915

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -2

Query: 317 TGCDLGVSERTQHP*R*RSSS-GVFGVCDSVADHVFEEHFEN 195
           T CD+  + +T +P +      G FG C  + +   E+ + N
Sbjct: 402 TNCDVATASQTCYPIQQAEMGLGTFGACQGLGNDTLEDFYYN 443


>Z81110-8|CAB03263.1|  915|Caenorhabditis elegans Hypothetical
           protein T01D3.6b protein.
          Length = 915

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -2

Query: 317 TGCDLGVSERTQHP*R*RSSS-GVFGVCDSVADHVFEEHFEN 195
           T CD+  + +T +P +      G FG C  + +   E+ + N
Sbjct: 402 TNCDVATASQTCYPIQQAEMGLGTFGACQGLGNDTLEDFYYN 443


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,387,455
Number of Sequences: 27780
Number of extensions: 131449
Number of successful extensions: 385
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)