Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1276
         (525 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    23   1.6  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    23   1.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   2.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   2.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   2.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   2.9  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   3.8  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   8.8  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.8  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 305 LVTSHFNTKSPRRGIPP 355
           L+T +FN K P R I P
Sbjct: 177 LITEYFNGKEPCRSINP 193


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 305 LVTSHFNTKSPRRGIPP 355
           L+T +FN K P R I P
Sbjct: 177 LITEYFNGKEPCRSINP 193


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 209 FDHVRDLWLTAAGLRFVSL 153
           FD V+DL+L A  LR+  L
Sbjct: 579 FDRVKDLFLEAVLLRYPDL 597


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 253 IVFFNFFLDWWRSYVSTTS 197
           I  F   L WW +Y+S  S
Sbjct: 258 IAIFLVSLGWWENYISRHS 276


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 253 IVFFNFFLDWWRSYVSTTS 197
           I  F   L WW +Y+S  S
Sbjct: 258 IAIFLVSLGWWENYISRHS 276


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 253 IVFFNFFLDWWRSYVSTTS 197
           I  F   L WW +Y+S  S
Sbjct: 258 IAIFLVSLGWWENYISRHS 276


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 253 IVFFNFFLDWWRSYVSTTS 197
           I  F   L WW +Y+S  S
Sbjct: 258 IAIFLVSLGWWENYISRHS 276


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 352 SESKTTTEEIPAAETSDEESANXKEP 429
           S   ++T  IP+  T+D+ S N   P
Sbjct: 123 STVSSSTSSIPSPSTTDDLSTNPTPP 148


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 295 KTNSGDIPLQYKEPPTRYSSESKTTT 372
           +T+SG+ P +      R+S  S  TT
Sbjct: 42  RTHSGEKPFRCPVCDRRFSQSSSVTT 67


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 295 KTNSGDIPLQYKEPPTRYSSESKTTT 372
           +T+SG+ P +      R+S  S  TT
Sbjct: 298 RTHSGEKPFRCPVCDRRFSQSSSVTT 323


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,011
Number of Sequences: 336
Number of extensions: 1958
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)