Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1276
         (525 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1714|AAS64673.2| 1701|Drosophila melanogaster CG33300-P...    29   3.9  
AE014296-1995|AAF50034.2|  962|Drosophila melanogaster CG6071-PA...    29   5.1  
AE014298-877|AAF46154.1| 1543|Drosophila melanogaster CG15894-PA...    28   8.9  
AE014297-1063|AAF54473.3|  640|Drosophila melanogaster CG12807-P...    28   8.9  

>AE014134-1714|AAS64673.2| 1701|Drosophila melanogaster CG33300-PA
           protein.
          Length = 1701

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +1

Query: 328 KEPPTRYSSESKTTTEEIPAAETSDEESANXKEPT 432
           +EP TR SS +KTT E     ET++  +   KEPT
Sbjct: 702 EEPTTRKSSTAKTTREPTTKRETTERTT---KEPT 733



 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +1

Query: 328 KEPPTRYSSESKTTTEEIPAAETSDEESANXKEPT 432
           +EP TR SS +KTT E     ET++  +   KEPT
Sbjct: 902 EEPTTRKSSTAKTTREPTTKRETTERTT---KEPT 933



 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 328  KEPPTRYSSESKTTTEEIPAAETSDEESANXKEPT 432
            +EP TR +S S  TT +     T+ E S   +EPT
Sbjct: 1541 REPTTRETSTSVKTTADQTTKRTTAEMSTTNQEPT 1575



 Score = 27.9 bits (59), Expect = 8.9
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = +1

Query: 328 KEPPTRYSSESKTTTEEIPAAETSD---EESANXKEPTRE 438
           +EP TR SS +KTT E     ET++   +E +  K  T E
Sbjct: 182 EEPTTRKSSTAKTTREPTTKRETTERTTQEPSTSKTTTHE 221



 Score = 27.9 bits (59), Expect = 8.9
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = +1

Query: 328 KEPPTRYSSESKTTTEEIPAAETSD---EESANXKEPTRE 438
           +EP TR SS +KTT E     ET++   +E +  K  T E
Sbjct: 507 EEPTTRKSSTAKTTREPTTKRETTERTTQEPSTSKTTTHE 546


>AE014296-1995|AAF50034.2|  962|Drosophila melanogaster CG6071-PA
           protein.
          Length = 962

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
 Frame = +1

Query: 289 SFKTNSG-DIPLQYKEPPTRYSS---ESKTTTEEIPAAETSD-EESANXKE 426
           S K  +G +IP+  K P T  SS   ES  TTE    AE+ D  ES+N  E
Sbjct: 669 STKARTGSEIPINTKSPVTTESSGTTESPDTTESPDTAESPDTTESSNTTE 719


>AE014298-877|AAF46154.1| 1543|Drosophila melanogaster CG15894-PA
            protein.
          Length = 1543

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = +1

Query: 286  DSFKTNSGDIP-LQYKEPPTRYSSESKTTT-EEIPAAETSDEESANXKEPTREGHS 447
            +   T   D P   YKEPPT  S E  TT+  E P+    D  ++    P    HS
Sbjct: 1055 EPINTTRRDQPSTSYKEPPTGTSREPVTTSIREHPSTSHHDSLTSVSYPPPERRHS 1110


>AE014297-1063|AAF54473.3|  640|Drosophila melanogaster CG12807-PA
           protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +1

Query: 277 VDLDSFKTNSGDIPLQYKEPPTRYSSESKTTTEEIPAAETSDEESANXKEPTREGHSLXS 456
           +++D+  T S D     +EP T  +    TTT E P   T+  E+    E T E  +  S
Sbjct: 207 MEMDAETTTSKDAESTTEEPATTTTEPPATTTAEPP---TTTTETPAETEATTEAPAATS 263

Query: 457 G 459
           G
Sbjct: 264 G 264


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,847,675
Number of Sequences: 53049
Number of extensions: 401272
Number of successful extensions: 1546
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1540
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)