Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1276
(525 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40798-9|AAY86274.1| 226|Caenorhabditis elegans Hypothetical pr... 30 0.88
S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein. 29 1.5
M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protei... 29 1.5
AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer :... 29 1.5
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 29 2.0
AL117195-22|CAB55034.1| 119|Caenorhabditis elegans Hypothetical... 29 2.7
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 28 3.6
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 28 3.6
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 28 3.6
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 28 3.6
AF014940-7|AAB63939.2| 135|Caenorhabditis elegans Hypothetical ... 28 4.7
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z82086-3|CAB04997.1| 325|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81493-5|CAB04042.1| 419|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 27 6.2
AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlec... 27 6.2
Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical p... 27 8.2
U53335-5|AAY86255.1| 233|Caenorhabditis elegans Hypothetical pr... 27 8.2
>U40798-9|AAY86274.1| 226|Caenorhabditis elegans Hypothetical
protein R13A1.10 protein.
Length = 226
Score = 30.3 bits (65), Expect = 0.88
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 151 SRRSGCCSRPIYRCVFCFTFISDVVVCVGFKRTVM 47
+ RS C + + R +FC TF+ D V+C FK M
Sbjct: 9 TERSNC--QDVARKIFCETFLKDNVICNSFKTNHM 41
>S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein.
Length = 1475
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 277 VDLDSFKTNSGDIPLQYKEPPTRYSSESKT-TTEEIPAAETSDEESANXKEP 429
V+LD F P +Y PP +YS + ++ +++E ++ + +N + P
Sbjct: 1129 VELDEFSIKRSSPPCRYYAPPPKYSCKKRSRSSDEDEDSDPNQPGPSNRRSP 1180
>M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protein
protein.
Length = 1475
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 277 VDLDSFKTNSGDIPLQYKEPPTRYSSESKT-TTEEIPAAETSDEESANXKEP 429
V+LD F P +Y PP +YS + ++ +++E ++ + +N + P
Sbjct: 1129 VELDEFSIKRSSPPCRYYAPPPKYSCKKRSRSSDEDEDSDPNQPGPSNRRSP 1180
>AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer : xx
animals transformedinto males protein 2, isoform a
protein.
Length = 1475
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 277 VDLDSFKTNSGDIPLQYKEPPTRYSSESKT-TTEEIPAAETSDEESANXKEP 429
V+LD F P +Y PP +YS + ++ +++E ++ + +N + P
Sbjct: 1129 VELDEFSIKRSSPPCRYYAPPPKYSCKKRSRSSDEDEDSDPNQPGPSNRRSP 1180
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 132 QQPLRRLQRHKTKSCRRQPEVADVVET*LLHQSRKK 239
QQP+R Q+H + QP V++ + HQ R K
Sbjct: 366 QQPIRFSQQHYQVNLDNQPSTGQVLQMQMQHQKRMK 401
>AL117195-22|CAB55034.1| 119|Caenorhabditis elegans Hypothetical
protein Y57A10A.29 protein.
Length = 119
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 422 RSPPEKVTACXVE*NSKRFVDD 487
+SPPE V +C V K+FVDD
Sbjct: 92 KSPPEDVESCQVYQKVKKFVDD 113
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical protein
T06D8.1b protein.
Length = 3653
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +1
Query: 304 SGDIPLQYKEPPTRYSSESKTTTEE---IPAAETSDEESANXKEP 429
SG+ + + T + S++TT+E + AAE+ DEES+ + P
Sbjct: 3203 SGESTVAPNDSETSTTESSQSTTDEGSGVTAAESKDEESSTTEAP 3247
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +1
Query: 304 SGDIPLQYKEPPTRYSSESKTTTEE---IPAAETSDEESANXKEP 429
SG+ + + T + S++TT+E + AAE+ DEES+ + P
Sbjct: 3203 SGESTVAPNDSETSTTESSQSTTDEGSGVTAAESKDEESSTTEAP 3247
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +1
Query: 304 SGDIPLQYKEPPTRYSSESKTTTEE---IPAAETSDEESANXKEP 429
SG+ + + T + S++TT+E + AAE+ DEES+ + P
Sbjct: 3203 SGESTVAPNDSETSTTESSQSTTDEGSGVTAAESKDEESSTTEAP 3247
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +1
Query: 304 SGDIPLQYKEPPTRYSSESKTTTEE---IPAAETSDEESANXKEP 429
SG+ + + T + S++TT+E + AAE+ DEES+ + P
Sbjct: 3203 SGESTVAPNDSETSTTESSQSTTDEGSGVTAAESKDEESSTTEAP 3247
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +1
Query: 304 SGDIPLQYKEPPTRYSSESKTTTEE---IPAAETSDEESANXKEP 429
SG+ + + T + S++TT+E + AAE+ DEES+ + P
Sbjct: 3203 SGESTVAPNDSETSTTESSQSTTDEGSGVTAAESKDEESSTTEAP 3247
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +1
Query: 304 SGDIPLQYKEPPTRYSSESKTTTEE---IPAAETSDEESANXKEP 429
SG+ + + T + S++TT+E + AAE+ DEES+ + P
Sbjct: 3203 SGESTVAPNDSETSTTESSQSTTDEGSGVTAAESKDEESSTTEAP 3247
>AF014940-7|AAB63939.2| 135|Caenorhabditis elegans Hypothetical
protein W02D7.8 protein.
Length = 135
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 310 DIPLQYKEPPTRYSSESKTTTEEIPAAETSDEESANXKEPTREGHSLXSGI 462
+ P Y + P Y+S +T T+E+PA E ++ R+G SG+
Sbjct: 24 EAPPSYYDFPPSYTSNGETFTDELPA--YCPTEFPGTRQCARDGSRSMSGV 72
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 316 PLQYKEPPTRYSSESKTTTEEIPAAETSDEESANXKEPT 432
P +EP T +E TTTEE T++E + +EPT
Sbjct: 2993 PTTTEEPITEEPTEEPTTTEE---PTTTEEPTTTTEEPT 3028
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 316 PLQYKEPPTRYSSESKTTTEEIPAAETSDEESANXKEPT 432
P +EP T +E TTTEE T++E + +EPT
Sbjct: 2993 PTTTEEPITEEPTEEPTTTEE---PTTTEEPTTTTEEPT 3028
>Z82086-3|CAB04997.1| 325|Caenorhabditis elegans Hypothetical
protein ZK228.6 protein.
Length = 325
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = -3
Query: 289 CRGRLTLNLGAYIVFFNFFLDWWRSY-VSTTSATSG*RRQDFV-LCL 155
C G + + L ++FF F + W+ + VS + AT+ ++Q FV LC+
Sbjct: 197 CVGLMFVFLFPQVIFFVFQISWYLYHTVSQSQATNRLQKQFFVALCI 243
>Z81493-5|CAB04042.1| 419|Caenorhabditis elegans Hypothetical
protein F01D5.6 protein.
Length = 419
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 382 PAAETSDEESANXKEPTREGHSLXSGIK 465
P+A SDEE + + + HSL SGIK
Sbjct: 50 PSAIVSDEERSRLVQRVNQLHSLTSGIK 77
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 346 YSSESKTTTEEIPAAETSDEESANXKEPTREGHSLXSGIKFXEICR*FXSCP 501
YS +T E PA ET + K P R ++ + F + SCP
Sbjct: 253 YSYSRETPKRETPARETPSYWNQEVKYPNRRLYNTGNSCYFNSTMQALSSCP 304
>AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlecan
protein.
Length = 925
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 316 PLQYKEPPTRYSSESKTTTEEIPAAETSDEESANXKEPT 432
P +EP T +E TTTEE T++E + +EPT
Sbjct: 543 PTTTEEPITEEPTEEPTTTEE---PTTTEEPTTTTEEPT 578
>Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical
protein Y49E10.19 protein.
Length = 1159
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 292 FKTNSG-DIPLQYKEPPTRYSSESKTTTEEIPAAETSDEESANXKEPTRE 438
F SG P Y+EPP + +++ E I ET +E+ + EP E
Sbjct: 631 FMEGSGAGTPSPYREPPLQRLEKNRPPAEVI-EEETENEDESEPYEPEEE 679
>U53335-5|AAY86255.1| 233|Caenorhabditis elegans Hypothetical
protein C55C3.8 protein.
Length = 233
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 283 LDSFKTNSGDIPLQYKEPPTRYSSESKTTTEEI 381
LDSF N+ +PLQ++ P R S E + E +
Sbjct: 92 LDSFLANANQLPLQFR-PALRLSLEYDESIESV 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,405,595
Number of Sequences: 27780
Number of extensions: 195256
Number of successful extensions: 848
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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