Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1275
         (470 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000065D3A6 Cluster: Formin-like protein 1 (Leukocyte...    32   5.5  
UniRef50_Q8IE41 Cluster: Putative uncharacterized protein MAL13P...    32   5.5  
UniRef50_Q7RFG3 Cluster: Putative uncharacterized protein PY0474...    32   5.5  
UniRef50_Q4S986 Cluster: Chromosome 3 SCAF14700, whole genome sh...    32   7.3  
UniRef50_Q26008 Cluster: DNA-directed RNA polymerase; n=2; Plasm...    32   7.3  
UniRef50_A0BYG6 Cluster: Chromosome undetermined scaffold_137, w...    31   9.7  
UniRef50_P54469 Cluster: Uncharacterized protein yqfD; n=4; Baci...    31   9.7  

>UniRef50_UPI000065D3A6 Cluster: Formin-like protein 1 (Leukocyte
           formin) (CLL-associated antigen KW- 13).; n=1; Takifugu
           rubripes|Rep: Formin-like protein 1 (Leukocyte formin)
           (CLL-associated antigen KW- 13). - Takifugu rubripes
          Length = 925

 Score = 32.3 bits (70), Expect = 5.5
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -3

Query: 378 RIDTTNQTRVGSRSDWSERDDVTVVRMCVRAIYPY 274
           R+ +T   ++  +S  S+RDDV V  MC+RAI  Y
Sbjct: 166 RLSSTLGNKIYKKSSSSQRDDVHVCIMCLRAIMNY 200


>UniRef50_Q8IE41 Cluster: Putative uncharacterized protein
           MAL13P1.151; n=1; Plasmodium falciparum 3D7|Rep:
           Putative uncharacterized protein MAL13P1.151 -
           Plasmodium falciparum (isolate 3D7)
          Length = 2213

 Score = 32.3 bits (70), Expect = 5.5
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +3

Query: 330 TNQNESPLSSDSSCLFVKKKSKCIHNNNNKKMCYANRVRHC 452
           +N + +   S+SSC    K +   +NN+NK MC  N V+ C
Sbjct: 754 SNSSSNSSRSNSSC----KHNNIYNNNHNKHMCIKNNVKEC 790


>UniRef50_Q7RFG3 Cluster: Putative uncharacterized protein PY04743;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY04743 - Plasmodium yoelii yoelii
          Length = 856

 Score = 32.3 bits (70), Expect = 5.5
 Identities = 25/107 (23%), Positives = 44/107 (41%)
 Frame = +3

Query: 129 QL*VLEVKLNDKLSQNNSATNMIT*RVDRHALYHLVLISNSTKHLIILNTDISRAHTFAQ 308
           Q+  L+ K   KL Q     N +  ++D+   Y+    +  T   I         ++   
Sbjct: 558 QIRKLKEKSKQKLKQKKKQQNTVNNKMDKRGKYYETKKNYKTSSEIFKIAKKCSQNSTKS 617

Query: 309 Q*RHRVPTNQNESPLSSDSSCLFVKKKSKCIHNNNNKKMCYANRVRH 449
           Q +  +  N   + +SS  + L  +  +K   NNN  K+ Y N+V H
Sbjct: 618 QYKSNIYNNIRRNNVSSIDNSLLFRNGTK---NNNFTKLNYGNKVFH 661


>UniRef50_Q4S986 Cluster: Chromosome 3 SCAF14700, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 3 SCAF14700, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 1204

 Score = 31.9 bits (69), Expect = 7.3
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -3

Query: 378 RIDTTNQTRVGSRSDWSERDDVTVVRMCVRAIYPY 274
           RI +T  +++  +S   +RDDV V  MC+RAI  Y
Sbjct: 195 RISSTLGSKIYKKSSSGQRDDVHVCIMCLRAIMNY 229


>UniRef50_Q26008 Cluster: DNA-directed RNA polymerase; n=2; Plasmodium
            falciparum|Rep: DNA-directed RNA polymerase - Plasmodium
            falciparum
          Length = 2910

 Score = 31.9 bits (69), Expect = 7.3
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +3

Query: 333  NQNESPLSSDSSCLFVKKKSKCIHNNNNKKMCYANR 440
            N+N+S + SDS    V    K I N NNK   Y NR
Sbjct: 2494 NKNDSDIDSDSESEMVSSNKKEIININNKDNYYTNR 2529


>UniRef50_A0BYG6 Cluster: Chromosome undetermined scaffold_137,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_137,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 647

 Score = 31.5 bits (68), Expect = 9.7
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 152 LYFEYLQLRECNIGMYVMFVIYLICLFLLTNMF 54
           L  E + L  CN G+Y+   I +ICLFL+T +F
Sbjct: 460 LPLEKINLAACNYGLYLK-TITIICLFLITIIF 491


>UniRef50_P54469 Cluster: Uncharacterized protein yqfD; n=4;
           Bacillus|Rep: Uncharacterized protein yqfD - Bacillus
           subtilis
          Length = 398

 Score = 31.5 bits (68), Expect = 9.7
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -1

Query: 164 FIIELYFEYLQLR-ECNIGMYVMFVIYLICLFLLTNMFTRTEYSAS 30
           FI    F +L L+ + NIG  + F I+ I LFLL+NM  + + + +
Sbjct: 71  FINRKGFPFLLLKSKLNIGFTIGFAIFFILLFLLSNMVWKIDVTGA 116


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,108,214
Number of Sequences: 1657284
Number of extensions: 7386624
Number of successful extensions: 18528
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18489
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)