Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1275
         (470 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    26   0.76 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   1.3  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.1  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    23   7.1  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    23   7.1  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   7.1  
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    22   9.4  

>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 25.8 bits (54), Expect = 0.76
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +2

Query: 116 YYIPSTVGTRSKAQ**IISEQ*CNEHDNLTCRPPCVISSSIN 241
           + IP+ + ++S+     ISE+ CNE+ +LT     + + ++N
Sbjct: 74  FSIPTPLNSQSRGGSERISEKKCNEYKDLTTESVAISALTLN 115


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -1

Query: 131  LRECNIGMYVMFVIYLIC-LFLLTNMF 54
            +RE NI MY+ FV ++I   F   N+F
Sbjct: 1533 IRETNIYMYLYFVFFIIFGSFFTLNLF 1559


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 119  NIGMYVMFVIYLICLFLLTNMF 54
            NI        Y++C FL+ N+F
Sbjct: 1399 NIAFPYFISFYVLCSFLIINLF 1420


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 317 SSRSDQSEREPTLV*FVVSIRKKKIKMHTQ 406
           SS SD++E E + V  VV  R+KK   + Q
Sbjct: 20  SSESDEAEEESSSV-VVVQDRRKKANPNVQ 48


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 317 SSRSDQSEREPTLV*FVVSIRKKKIKMHTQ 406
           SS SD++E E + V  VV  R+KK   + Q
Sbjct: 20  SSESDEAEEESSSV-VVVQDRRKKANPNVQ 48


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +1

Query: 49  LVNMLVNRNRQMR*ITNITYIPILHSLNC 135
           ++   + R R+   I N  Y P++ + NC
Sbjct: 515 VLESFLQRGREYADIANAYYGPVIENFNC 543


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 101 MFVIYLICLFLLTNMFTRTEYSA 33
           M V Y +C +  TN+  R+ Y +
Sbjct: 207 MDVYYFVCNYSFTNIMDRSVYQS 229


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,224
Number of Sequences: 2352
Number of extensions: 8615
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)