Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1275
(470 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 26 0.23
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 25 0.41
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 25 0.54
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 25 0.54
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 25 0.54
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.54
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 1.2
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 1.2
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 23 1.2
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 1.2
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 1.2
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 1.2
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 2.2
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 22 3.8
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 22 3.8
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 3.8
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 6.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 6.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 6.7
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 8.8
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 8.8
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 8.8
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 8.8
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 8.8
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 8.8
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 8.8
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 8.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 8.8
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 8.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.8
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 8.8
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 8.8
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.8 bits (54), Expect = 0.23
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 390 SKCIHNNNNKKMCYANRVRH 449
+K IHNNNN K Y N+ +
Sbjct: 87 NKTIHNNNNYKYNYNNKYNY 106
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.41
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 390 SKCIHNNNNKKMCYANRVR 446
+K IHNNNN K Y N +
Sbjct: 87 NKTIHNNNNYKYNYNNNCK 105
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 0.54
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 390 SKCIHNNNNKKMCYAN 437
+K IHNNNN K Y N
Sbjct: 87 NKTIHNNNNYKYNYNN 102
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 0.54
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 390 SKCIHNNNNKKMCYAN 437
+K IHNNNN K Y N
Sbjct: 87 NKTIHNNNNYKYNYNN 102
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 0.54
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 390 SKCIHNNNNKKMCYAN 437
+K IHNNNN K Y N
Sbjct: 87 NKTIHNNNNYKYNYNN 102
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.6 bits (51), Expect = 0.54
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 390 SKCIHNNNNKKMCYAN 437
+K IHNNNN K Y N
Sbjct: 320 NKTIHNNNNYKYNYNN 335
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.4 bits (48), Expect = 1.2
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
Frame = +3
Query: 390 SKCIHNNNN--KKMCYAN 437
+K IHNNNN KK+ Y N
Sbjct: 87 NKTIHNNNNNYKKLQYYN 104
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.4 bits (48), Expect = 1.2
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
Frame = +3
Query: 390 SKCIHNNNN--KKMCYAN 437
+K IHNNNN KK+ Y N
Sbjct: 87 NKTIHNNNNNYKKLQYYN 104
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 23.4 bits (48), Expect = 1.2
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
Frame = +3
Query: 390 SKCIHNNNN--KKMCYAN 437
+K IHNNNN KK+ Y N
Sbjct: 87 NKTIHNNNNNYKKLQYYN 104
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.4 bits (48), Expect = 1.2
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
Frame = +3
Query: 390 SKCIHNNNN--KKMCYAN 437
+K IHNNNN KK+ Y N
Sbjct: 87 NKTIHNNNNNYKKLQYYN 104
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.4 bits (48), Expect = 1.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 390 SKCIHNNNNKKMCYAN 437
++ IHNNNN K Y N
Sbjct: 87 NRTIHNNNNYKYNYNN 102
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.4 bits (48), Expect = 1.2
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
Frame = +3
Query: 390 SKCIHNNNN--KKMCYAN 437
+K IHNNNN KK+ Y N
Sbjct: 320 NKTIHNNNNNYKKLQYYN 337
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 2.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 357 SDSSCLFVKKKSKCIHNNNNKK 422
S S + +K IHNNNN K
Sbjct: 309 SKESKIISSLSNKTIHNNNNYK 330
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 402 HNNNNKKMCYANRVR 446
+NNNN K Y N R
Sbjct: 91 YNNNNYKKLYCNNYR 105
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 21.8 bits (44), Expect = 3.8
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 329 RNAMTSLLCECVCAR 285
R A S++C+C C R
Sbjct: 70 RFAFKSIICKCFCKR 84
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.8 bits (44), Expect = 3.8
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 329 RNAMTSLLCECVCAR 285
R A S++C+C C R
Sbjct: 518 RFAFKSIICKCFCKR 532
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.0 bits (42), Expect = 6.7
Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 209 RPPCVISS-SINFKFD*TSNYTQY 277
+ P +ISS S N+K+ +NY Y
Sbjct: 77 KEPKIISSLSNNYKYSNYNNYNNY 100
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 402 HNNNNKKMCYANRV 443
+NN NKK+ Y N +
Sbjct: 97 YNNYNKKLYYKNYI 110
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.0 bits (42), Expect = 6.7
Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 209 RPPCVISS-SINFKFD*TSNYTQY 277
+ P +ISS S N+K+ +NY Y
Sbjct: 310 KEPKIISSLSNNYKYSNYNNYNNY 333
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 402 HNNNNKKMCYANRV 443
+NN NKK+ Y N +
Sbjct: 338 YNNYNKKLYYKNYI 351
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 6.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 293 THIRTTVTSSRSDQS 337
T++ TTVTS DQS
Sbjct: 731 TNVATTVTSMSIDQS 745
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 8.8
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 402 HNNNNKKMCY 431
+NNN K++CY
Sbjct: 95 NNNNYKQLCY 104
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 8.8
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 402 HNNNNKKMCY 431
+NNN K++CY
Sbjct: 95 NNNNYKQLCY 104
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 8.8
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 402 HNNNNKKMCY 431
+NNN K++CY
Sbjct: 95 NNNNYKQLCY 104
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 8.8
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 402 HNNNNKKMCY 431
+NNN K++CY
Sbjct: 95 NNNNYKQLCY 104
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 8.8
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 402 HNNNNKKMCY 431
+NNN K++CY
Sbjct: 95 NNNNYKQLCY 104
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 8.8
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 402 HNNNNKKMCY 431
+NNN K++CY
Sbjct: 95 NNNNYKQLCY 104
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 402 HNNNNKKMCYANRVR 446
+NNNN K Y N +
Sbjct: 91 YNNNNYKKLYCNNYK 105
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 402 HNNNNKKMCYANRVR 446
+NNNN K Y N +
Sbjct: 91 YNNNNYKKLYCNNYK 105
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 390 SKCIHNNNN 416
+K IHNNNN
Sbjct: 87 NKTIHNNNN 95
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 390 SKCIHNNNN 416
+K IHNNNN
Sbjct: 87 NKTIHNNNN 95
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 390 SKCIHNNNN 416
+K IHNNNN
Sbjct: 320 NKTIHNNNN 328
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 402 HNNNNKKMCYANRV 443
+NN NKK+ Y N +
Sbjct: 333 YNNYNKKLYYKNYI 346
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 390 SKCIHNNNN 416
+K IHNNNN
Sbjct: 309 NKTIHNNNN 317
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,155
Number of Sequences: 438
Number of extensions: 2603
Number of successful extensions: 34
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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