BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1275 (470 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 26 0.23 DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 25 0.41 DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 25 0.54 DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 25 0.54 DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 25 0.54 AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.54 DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 1.2 DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 1.2 DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 23 1.2 DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 1.2 DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 1.2 AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 1.2 AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 2.2 DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 22 3.8 AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 22 3.8 AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 3.8 DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 6.7 AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 6.7 AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 6.7 DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 8.8 DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 8.8 DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 8.8 DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 8.8 DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 8.8 DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 8.8 DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 8.8 DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 8.8 DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 8.8 DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 8.8 AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.8 AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 8.8 AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 8.8 >DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 25.8 bits (54), Expect = 0.23 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +3 Query: 390 SKCIHNNNNKKMCYANRVRH 449 +K IHNNNN K Y N+ + Sbjct: 87 NKTIHNNNNYKYNYNNKYNY 106 >DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 25.0 bits (52), Expect = 0.41 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +3 Query: 390 SKCIHNNNNKKMCYANRVR 446 +K IHNNNN K Y N + Sbjct: 87 NKTIHNNNNYKYNYNNNCK 105 >DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 24.6 bits (51), Expect = 0.54 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +3 Query: 390 SKCIHNNNNKKMCYAN 437 +K IHNNNN K Y N Sbjct: 87 NKTIHNNNNYKYNYNN 102 >DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 24.6 bits (51), Expect = 0.54 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +3 Query: 390 SKCIHNNNNKKMCYAN 437 +K IHNNNN K Y N Sbjct: 87 NKTIHNNNNYKYNYNN 102 >DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 24.6 bits (51), Expect = 0.54 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +3 Query: 390 SKCIHNNNNKKMCYAN 437 +K IHNNNN K Y N Sbjct: 87 NKTIHNNNNYKYNYNN 102 >AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex determiner protein. Length = 428 Score = 24.6 bits (51), Expect = 0.54 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +3 Query: 390 SKCIHNNNNKKMCYAN 437 +K IHNNNN K Y N Sbjct: 320 NKTIHNNNNYKYNYNN 335 >DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex determiner protein. Length = 177 Score = 23.4 bits (48), Expect = 1.2 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%) Frame = +3 Query: 390 SKCIHNNNN--KKMCYAN 437 +K IHNNNN KK+ Y N Sbjct: 87 NKTIHNNNNNYKKLQYYN 104 >DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex determiner protein. Length = 177 Score = 23.4 bits (48), Expect = 1.2 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%) Frame = +3 Query: 390 SKCIHNNNN--KKMCYAN 437 +K IHNNNN KK+ Y N Sbjct: 87 NKTIHNNNNNYKKLQYYN 104 >DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex determiner protein. Length = 176 Score = 23.4 bits (48), Expect = 1.2 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%) Frame = +3 Query: 390 SKCIHNNNN--KKMCYAN 437 +K IHNNNN KK+ Y N Sbjct: 87 NKTIHNNNNNYKKLQYYN 104 >DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex determiner protein. Length = 177 Score = 23.4 bits (48), Expect = 1.2 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%) Frame = +3 Query: 390 SKCIHNNNN--KKMCYAN 437 +K IHNNNN KK+ Y N Sbjct: 87 NKTIHNNNNNYKKLQYYN 104 >DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex determiner protein. Length = 186 Score = 23.4 bits (48), Expect = 1.2 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +3 Query: 390 SKCIHNNNNKKMCYAN 437 ++ IHNNNN K Y N Sbjct: 87 NRTIHNNNNYKYNYNN 102 >AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex determiner protein. Length = 410 Score = 23.4 bits (48), Expect = 1.2 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%) Frame = +3 Query: 390 SKCIHNNNN--KKMCYAN 437 +K IHNNNN KK+ Y N Sbjct: 320 NKTIHNNNNNYKKLQYYN 337 >AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 22.6 bits (46), Expect = 2.2 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +3 Query: 357 SDSSCLFVKKKSKCIHNNNNKK 422 S S + +K IHNNNN K Sbjct: 309 SKESKIISSLSNKTIHNNNNYK 330 >DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 21.8 bits (44), Expect = 3.8 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = +3 Query: 402 HNNNNKKMCYANRVR 446 +NNNN K Y N R Sbjct: 91 YNNNNYKKLYCNNYR 105 >AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor protein. Length = 139 Score = 21.8 bits (44), Expect = 3.8 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = -1 Query: 329 RNAMTSLLCECVCAR 285 R A S++C+C C R Sbjct: 70 RFAFKSIICKCFCKR 84 >AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor protein. Length = 587 Score = 21.8 bits (44), Expect = 3.8 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = -1 Query: 329 RNAMTSLLCECVCAR 285 R A S++C+C C R Sbjct: 518 RFAFKSIICKCFCKR 532 >DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex determiner protein. Length = 178 Score = 21.0 bits (42), Expect = 6.7 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%) Frame = +2 Query: 209 RPPCVISS-SINFKFD*TSNYTQY 277 + P +ISS S N+K+ +NY Y Sbjct: 77 KEPKIISSLSNNYKYSNYNNYNNY 100 Score = 20.6 bits (41), Expect = 8.8 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = +3 Query: 402 HNNNNKKMCYANRV 443 +NN NKK+ Y N + Sbjct: 97 YNNYNKKLYYKNYI 110 >AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex determiner protein. Length = 419 Score = 21.0 bits (42), Expect = 6.7 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%) Frame = +2 Query: 209 RPPCVISS-SINFKFD*TSNYTQY 277 + P +ISS S N+K+ +NY Y Sbjct: 310 KEPKIISSLSNNYKYSNYNNYNNY 333 Score = 20.6 bits (41), Expect = 8.8 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = +3 Query: 402 HNNNNKKMCYANRV 443 +NN NKK+ Y N + Sbjct: 338 YNNYNKKLYYKNYI 351 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 21.0 bits (42), Expect = 6.7 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +2 Query: 293 THIRTTVTSSRSDQS 337 T++ TTVTS DQS Sbjct: 731 TNVATTVTSMSIDQS 745 >DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 20.6 bits (41), Expect = 8.8 Identities = 6/10 (60%), Positives = 9/10 (90%) Frame = +3 Query: 402 HNNNNKKMCY 431 +NNN K++CY Sbjct: 95 NNNNYKQLCY 104 >DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 20.6 bits (41), Expect = 8.8 Identities = 6/10 (60%), Positives = 9/10 (90%) Frame = +3 Query: 402 HNNNNKKMCY 431 +NNN K++CY Sbjct: 95 NNNNYKQLCY 104 >DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 20.6 bits (41), Expect = 8.8 Identities = 6/10 (60%), Positives = 9/10 (90%) Frame = +3 Query: 402 HNNNNKKMCY 431 +NNN K++CY Sbjct: 95 NNNNYKQLCY 104 >DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 20.6 bits (41), Expect = 8.8 Identities = 6/10 (60%), Positives = 9/10 (90%) Frame = +3 Query: 402 HNNNNKKMCY 431 +NNN K++CY Sbjct: 95 NNNNYKQLCY 104 >DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 20.6 bits (41), Expect = 8.8 Identities = 6/10 (60%), Positives = 9/10 (90%) Frame = +3 Query: 402 HNNNNKKMCY 431 +NNN K++CY Sbjct: 95 NNNNYKQLCY 104 >DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 20.6 bits (41), Expect = 8.8 Identities = 6/10 (60%), Positives = 9/10 (90%) Frame = +3 Query: 402 HNNNNKKMCY 431 +NNN K++CY Sbjct: 95 NNNNYKQLCY 104 >DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 20.6 bits (41), Expect = 8.8 Identities = 7/15 (46%), Positives = 9/15 (60%) Frame = +3 Query: 402 HNNNNKKMCYANRVR 446 +NNNN K Y N + Sbjct: 91 YNNNNYKKLYCNNYK 105 >DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 20.6 bits (41), Expect = 8.8 Identities = 7/15 (46%), Positives = 9/15 (60%) Frame = +3 Query: 402 HNNNNKKMCYANRVR 446 +NNNN K Y N + Sbjct: 91 YNNNNYKKLYCNNYK 105 >DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 20.6 bits (41), Expect = 8.8 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = +3 Query: 390 SKCIHNNNN 416 +K IHNNNN Sbjct: 87 NKTIHNNNN 95 >DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex determiner protein. Length = 191 Score = 20.6 bits (41), Expect = 8.8 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = +3 Query: 390 SKCIHNNNN 416 +K IHNNNN Sbjct: 87 NKTIHNNNN 95 >AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex determiner protein. Length = 426 Score = 20.6 bits (41), Expect = 8.8 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = +3 Query: 390 SKCIHNNNN 416 +K IHNNNN Sbjct: 320 NKTIHNNNN 328 >AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex determiner protein. Length = 413 Score = 20.6 bits (41), Expect = 8.8 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = +3 Query: 402 HNNNNKKMCYANRV 443 +NN NKK+ Y N + Sbjct: 333 YNNYNKKLYYKNYI 346 >AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex determiner protein. Length = 400 Score = 20.6 bits (41), Expect = 8.8 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = +3 Query: 390 SKCIHNNNN 416 +K IHNNNN Sbjct: 309 NKTIHNNNN 317 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 123,155 Number of Sequences: 438 Number of extensions: 2603 Number of successful extensions: 34 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 34 length of database: 146,343 effective HSP length: 53 effective length of database: 123,129 effective search space used: 12682287 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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