Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1274
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding pr...    26   1.3  
AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding pr...    26   1.3  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    24   4.0  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   4.0  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    24   5.3  
EF426224-1|ABO26467.1|   94|Anopheles gambiae unknown protein.         23   9.2  
EF426223-1|ABO26466.1|   94|Anopheles gambiae unknown protein.         23   9.2  

>AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding
           protein AgamOBP32 protein.
          Length = 320

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 596 HCSSHQRMLHPGPH 637
           HC + QR+ HP PH
Sbjct: 111 HCLNSQRLNHPSPH 124


>AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding
           protein AgamOBP33 protein.
          Length = 334

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 596 HCSSHQRMLHPGPH 637
           HC + QR+ HP PH
Sbjct: 111 HCLNSQRLNHPSPH 124


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 668 SYLCLNFGYGNVGRDVTYV 612
           S+LC  + YGN+ +D  +V
Sbjct: 135 SFLCYYYNYGNLRQDSVFV 153


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 281  NYVDDRSSYSSDTGGAH*RRQLPFFRFAAFFRQLENHSP 397
            N++  R + ++  GG+  RR L   R A   +++EN  P
Sbjct: 1407 NFLLRRGTSATPAGGSFKRRSLKLRRGAKDLKEVENEYP 1445


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 242 WLPNNLAAMFLISNYVDDRSSYSSDTGG 325
           W+P+  A + L SNY    SS    T G
Sbjct: 253 WIPHCGARLILNSNYTRKSSSKKDPTSG 280


>EF426224-1|ABO26467.1|   94|Anopheles gambiae unknown protein.
          Length = 94

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/30 (26%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 556 FIMTLKNVGSVCKIMCDHNANIF-CIQKSD 470
           F      +G+ CK++C++ A +  C +K++
Sbjct: 19  FSTVSSGLGTPCKVLCENGAEMIPCDRKTE 48


>EF426223-1|ABO26466.1|   94|Anopheles gambiae unknown protein.
          Length = 94

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/30 (26%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 556 FIMTLKNVGSVCKIMCDHNANIF-CIQKSD 470
           F      +G+ CK++C++ A +  C +K++
Sbjct: 19  FSTVSSGLGTPCKVLCENGAEMIPCDRKTE 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,769
Number of Sequences: 2352
Number of extensions: 11405
Number of successful extensions: 49
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)