Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1273
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.7  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   9.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   9.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   9.9  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 641 CPGRFAWPLQGSSCIWKT 694
           CP   A+ ++  +C WKT
Sbjct: 74  CPVGLAFDIERQTCDWKT 91


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 117 FVSISICFNKCLLITLLSFQRYIYI 43
           FV +++     L I  +SF+RY  I
Sbjct: 148 FVELTVAHASVLTILAISFERYYAI 172


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 117 FVSISICFNKCLLITLLSFQRYIYI 43
           FV +++     L I  +SF+RY  I
Sbjct: 148 FVELTVAHASVLTILAISFERYYAI 172


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 302 NSDPRTYSVYSLDRIVSILPA 364
           N+  RTYS YSL  + +I  A
Sbjct: 243 NAYARTYSTYSLFMMANITVA 263


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 302 NSDPRTYSVYSLDRIVSILPA 364
           N+  RTYS YSL  + +I  A
Sbjct: 243 NAYARTYSTYSLFMMANITVA 263


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 302 NSDPRTYSVYSLDRIVSILPA 364
           N+  RTYS YSL  + +I  A
Sbjct: 243 NAYARTYSTYSLFMMANITVA 263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,525
Number of Sequences: 336
Number of extensions: 3004
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)