Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1270
(384 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533462-1|CAG38493.1| 201|Homo sapiens RAB1B protein. 54 1e-07
BC071169-1|AAH71169.1| 201|Homo sapiens RAB1B, member RAS oncog... 54 1e-07
AF092437-1|AAP97212.1| 201|Homo sapiens rab1B protein. 54 1e-07
M28209-1|AAA60240.1| 205|Homo sapiens GTP-binding protein protein. 51 1e-06
CR536488-1|CAG38727.1| 205|Homo sapiens RAB1A protein. 51 1e-06
CR533479-1|CAG38510.1| 129|Homo sapiens RAB1A protein. 51 1e-06
BT019529-1|AAV38336.1| 205|Homo sapiens RAB1A, member RAS oncog... 51 1e-06
BT019528-1|AAV38335.1| 205|Homo sapiens RAB1A, member RAS oncog... 51 1e-06
BC000905-1|AAH00905.1| 205|Homo sapiens RAB1A, member RAS oncog... 51 1e-06
AK055927-1|BAB71048.1| 141|Homo sapiens protein ( Homo sapiens ... 51 1e-06
AF498929-1|AAM21077.1| 205|Homo sapiens small GTP binding prote... 51 1e-06
AF398475-1|AAK94463.1| 94|Homo sapiens GTP binding protein Rab... 51 1e-06
X56741-1|CAA40065.1| 207|Homo sapiens rab8 small GTP binding p... 36 0.034
CR542274-1|CAG47070.1| 207|Homo sapiens RAB8A protein. 36 0.034
CR536583-1|CAG38820.1| 207|Homo sapiens RAB8A protein. 36 0.034
BT007184-1|AAP35848.1| 207|Homo sapiens mel transforming oncoge... 36 0.034
BC002977-1|AAH02977.1| 207|Homo sapiens RAB8A, member RAS oncog... 36 0.034
AF498943-1|AAM21091.1| 207|Homo sapiens small GTP binding prote... 36 0.034
BC062319-1|AAH62319.1| 212|Homo sapiens RAB43, member RAS oncog... 36 0.045
AY166852-1|AAO17291.1| 212|Homo sapiens RAB43 protein. 36 0.045
S53268-1|AAB19681.1| 206|Homo sapiens RAS-related protein MEL p... 32 0.55
BC020654-1|AAH20654.1| 207|Homo sapiens RAB8B, member RAS oncog... 31 1.7
AB038995-1|BAA92249.1| 207|Homo sapiens RAB-8b protein protein. 31 1.7
BC040547-1|AAH40547.1| 216|Homo sapiens RAB37, member RAS oncog... 29 5.1
BC016615-1|AAH16615.1| 223|Homo sapiens RAB37, member RAS oncog... 29 5.1
AK098068-1|BAC05227.1| 223|Homo sapiens protein ( Homo sapiens ... 29 5.1
>CR533462-1|CAG38493.1| 201|Homo sapiens RAB1B protein.
Length = 201
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/56 (51%), Positives = 34/56 (60%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPSTGXAPAGHVKIDQGQPSTPASPRXXEYC 217
TS KN+TNVEQAFMTMA EIK R+GP + ++KID STP P C
Sbjct: 150 TSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKID----STPVKPAGGGCC 201
>BC071169-1|AAH71169.1| 201|Homo sapiens RAB1B, member RAS oncogene
family protein.
Length = 201
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/56 (51%), Positives = 34/56 (60%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPSTGXAPAGHVKIDQGQPSTPASPRXXEYC 217
TS KN+TNVEQAFMTMA EIK R+GP + ++KID STP P C
Sbjct: 150 TSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKID----STPVKPAGGGCC 201
>AF092437-1|AAP97212.1| 201|Homo sapiens rab1B protein.
Length = 201
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/56 (51%), Positives = 34/56 (60%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPSTGXAPAGHVKIDQGQPSTPASPRXXEYC 217
TS KN+TNVEQAFMTMA EIK R+GP + ++KID STP P C
Sbjct: 150 TSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKID----STPVKPAGGGCC 201
>M28209-1|AAA60240.1| 205|Homo sapiens GTP-binding protein protein.
Length = 205
Score = 51.2 bits (117), Expect = 1e-06
Identities = 26/40 (65%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPST-GXAPAGHVKI 268
TS KN+TNVEQ+FMTMA EIK R+GP +T G A +VKI
Sbjct: 153 TSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKI 192
>CR536488-1|CAG38727.1| 205|Homo sapiens RAB1A protein.
Length = 205
Score = 51.2 bits (117), Expect = 1e-06
Identities = 26/40 (65%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPST-GXAPAGHVKI 268
TS KN+TNVEQ+FMTMA EIK R+GP +T G A +VKI
Sbjct: 153 TSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKI 192
>CR533479-1|CAG38510.1| 129|Homo sapiens RAB1A protein.
Length = 129
Score = 51.2 bits (117), Expect = 1e-06
Identities = 26/40 (65%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPST-GXAPAGHVKI 268
TS KN+TNVEQ+FMTMA EIK R+GP +T G A +VKI
Sbjct: 77 TSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKI 116
>BT019529-1|AAV38336.1| 205|Homo sapiens RAB1A, member RAS oncogene
family protein.
Length = 205
Score = 51.2 bits (117), Expect = 1e-06
Identities = 26/40 (65%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPST-GXAPAGHVKI 268
TS KN+TNVEQ+FMTMA EIK R+GP +T G A +VKI
Sbjct: 153 TSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKI 192
>BT019528-1|AAV38335.1| 205|Homo sapiens RAB1A, member RAS oncogene
family protein.
Length = 205
Score = 51.2 bits (117), Expect = 1e-06
Identities = 26/40 (65%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPST-GXAPAGHVKI 268
TS KN+TNVEQ+FMTMA EIK R+GP +T G A +VKI
Sbjct: 153 TSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKI 192
>BC000905-1|AAH00905.1| 205|Homo sapiens RAB1A, member RAS oncogene
family protein.
Length = 205
Score = 51.2 bits (117), Expect = 1e-06
Identities = 26/40 (65%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPST-GXAPAGHVKI 268
TS KN+TNVEQ+FMTMA EIK R+GP +T G A +VKI
Sbjct: 153 TSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKI 192
>AK055927-1|BAB71048.1| 141|Homo sapiens protein ( Homo sapiens
cDNA FLJ31365 fis, clone NB9N41000135, highly similar to
RAS-RELATED PROTEIN RAB-1A. ).
Length = 141
Score = 51.2 bits (117), Expect = 1e-06
Identities = 26/40 (65%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPST-GXAPAGHVKI 268
TS KN+TNVEQ+FMTMA EIK R+GP +T G A +VKI
Sbjct: 89 TSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKI 128
>AF498929-1|AAM21077.1| 205|Homo sapiens small GTP binding protein
RAB1A protein.
Length = 205
Score = 51.2 bits (117), Expect = 1e-06
Identities = 26/40 (65%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPST-GXAPAGHVKI 268
TS KN+TNVEQ+FMTMA EIK R+GP +T G A +VKI
Sbjct: 153 TSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKI 192
>AF398475-1|AAK94463.1| 94|Homo sapiens GTP binding protein Rab1a
protein.
Length = 94
Score = 51.2 bits (117), Expect = 1e-06
Identities = 26/40 (65%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPST-GXAPAGHVKI 268
TS KN+TNVEQ+FMTMA EIK R+GP +T G A +VKI
Sbjct: 42 TSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKI 81
>X56741-1|CAA40065.1| 207|Homo sapiens rab8 small GTP binding
protein protein.
Length = 207
Score = 36.3 bits (80), Expect = 0.034
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPSTGXAPAGHVKIDQGQPSTPASPRXXEY--CLL 211
TS K + NVE AF T+A +IKA++ G +P G +QG TP + + C+L
Sbjct: 150 TSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS---NQGVKITPDQQKRSSFFRCVL 206
>CR542274-1|CAG47070.1| 207|Homo sapiens RAB8A protein.
Length = 207
Score = 36.3 bits (80), Expect = 0.034
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPSTGXAPAGHVKIDQGQPSTPASPRXXEY--CLL 211
TS K + NVE AF T+A +IKA++ G +P G +QG TP + + C+L
Sbjct: 150 TSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS---NQGVKITPDQQKRSSFFRCVL 206
>CR536583-1|CAG38820.1| 207|Homo sapiens RAB8A protein.
Length = 207
Score = 36.3 bits (80), Expect = 0.034
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPSTGXAPAGHVKIDQGQPSTPASPRXXEY--CLL 211
TS K + NVE AF T+A +IKA++ G +P G +QG TP + + C+L
Sbjct: 150 TSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS---NQGVKITPDQQKRSSFFRCVL 206
>BT007184-1|AAP35848.1| 207|Homo sapiens mel transforming oncogene
(derived from cell line NK14)- RAB8 homolog protein.
Length = 207
Score = 36.3 bits (80), Expect = 0.034
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPSTGXAPAGHVKIDQGQPSTPASPRXXEY--CLL 211
TS K + NVE AF T+A +IKA++ G +P G +QG TP + + C+L
Sbjct: 150 TSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS---NQGVKITPDQQKRSSFFRCVL 206
>BC002977-1|AAH02977.1| 207|Homo sapiens RAB8A, member RAS oncogene
family protein.
Length = 207
Score = 36.3 bits (80), Expect = 0.034
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPSTGXAPAGHVKIDQGQPSTPASPRXXEY--CLL 211
TS K + NVE AF T+A +IKA++ G +P G +QG TP + + C+L
Sbjct: 150 TSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS---NQGVKITPDQQKRSSFFRCVL 206
>AF498943-1|AAM21091.1| 207|Homo sapiens small GTP binding protein
RAB8 protein.
Length = 207
Score = 36.3 bits (80), Expect = 0.034
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPSTGXAPAGHVKIDQGQPSTPASPRXXEY--CLL 211
TS K + NVE AF T+A +IKA++ G +P G +QG TP + + C+L
Sbjct: 150 TSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS---NQGVKITPDQQKRSSFFRCVL 206
>BC062319-1|AAH62319.1| 212|Homo sapiens RAB43, member RAS oncogene
family protein.
Length = 212
Score = 35.9 bits (79), Expect = 0.045
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPSTGXAPAGHVKID 265
TS K+S+NVE+AF+ +ATE+ R G P H++++
Sbjct: 161 TSAKDSSNVEEAFLRVATELIMRHGGPLFSEKSPDHIQLN 200
>AY166852-1|AAO17291.1| 212|Homo sapiens RAB43 protein.
Length = 212
Score = 35.9 bits (79), Expect = 0.045
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPSTGXAPAGHVKID 265
TS K+S+NVE+AF+ +ATE+ R G P H++++
Sbjct: 161 TSAKDSSNVEEAFLRVATELIMRHGGPLFSEKSPDHIQLN 200
>S53268-1|AAB19681.1| 206|Homo sapiens RAS-related protein MEL
protein.
Length = 206
Score = 32.3 bits (70), Expect = 0.55
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVGPPSTGXAPAGH--VKIDQGQ 256
TS K + NVE AF T+A +IKA++ AP + VKI Q
Sbjct: 150 TSAKANINVENAFFTLARDIKAKMDKKWKATAPGSNQGVKITPDQ 194
>BC020654-1|AAH20654.1| 207|Homo sapiens RAB8B, member RAS oncogene
family protein.
Length = 207
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVG---PPSTGXAPAGHVKIDQGQ 256
TS K+S NVE+AF T+A +I ++ S G VKI + +
Sbjct: 150 TSAKSSANVEEAFFTLARDIMTKLNRKMNDSNSAGAGGPVKITENR 195
>AB038995-1|BAA92249.1| 207|Homo sapiens RAB-8b protein protein.
Length = 207
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVG---PPSTGXAPAGHVKIDQGQ 256
TS K+S NVE+AF T+A +I ++ S G VKI + +
Sbjct: 150 TSAKSSANVEEAFFTLARDIMTKLNRKMNDSNSAGAGGPVKITENR 195
>BC040547-1|AAH40547.1| 216|Homo sapiens RAB37, member RAS oncogene
family protein.
Length = 216
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVG 310
TS K NVE AF+ +A E+K R G
Sbjct: 165 TSAKTGMNVELAFLAIAKELKYRAG 189
>BC016615-1|AAH16615.1| 223|Homo sapiens RAB37, member RAS oncogene
family protein.
Length = 223
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVG 310
TS K NVE AF+ +A E+K R G
Sbjct: 172 TSAKTGMNVELAFLAIAKELKYRAG 196
>AK098068-1|BAC05227.1| 223|Homo sapiens protein ( Homo sapiens
cDNA FLJ40749 fis, clone TRACH2000540, highly similar to
Mus musculus GTPase Rab37 (Rab37) mRNA. ).
Length = 223
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 384 TSXKNSTNVEQAFMTMATEIKARVG 310
TS K NVE AF+ +A E+K R G
Sbjct: 172 TSAKTGMNVELAFLAIAKELKYRAG 196
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,325,796
Number of Sequences: 237096
Number of extensions: 761010
Number of successful extensions: 2310
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2310
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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