Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1266
         (677 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IC40 Cluster: Putative uncharacterized protein PF07_0...    33   6.4  
UniRef50_A2DWI6 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  

>UniRef50_Q8IC40 Cluster: Putative uncharacterized protein
           PF07_0010; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PF07_0010 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1843

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = -3

Query: 654 KCVITGVY*QFSICESAKMWKNETKPLNGSFSGSSKKSTEKISVN--VHHLXRLYFITYN 481
           KCV    +  FSI  +     NET  ++  FS  SKK T +I++N  +  L ++Y++ + 
Sbjct: 378 KCVNNLKHKMFSIYFNRIKENNETNFVHFLFSDDSKK-TNQININELLTTLLKIYYLLFK 436

Query: 480 LI*FNFI 460
           +  FNFI
Sbjct: 437 IKPFNFI 443


>UniRef50_A2DWI6 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 552

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = -2

Query: 190 ST*NHSDQIHTSYT-----QYLY--NNK*SKNFVPLFTKIARTEEYEISHTYREYREGVQ 32
           ST  H D +H SY      Q+ +  NNK  ++ +P+   I   ++ ++ H  + +RE  Q
Sbjct: 484 STKGHIDGVHASYLKKSLLQFFFADNNKQRESMIPMILDILSCDDNQVQHAMKNWRESQQ 543


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,073,620
Number of Sequences: 1657284
Number of extensions: 11756934
Number of successful extensions: 22042
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22039
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)