Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1266
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    23   3.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   9.3  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.3  

>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 445 SQINHLHFISLHH 407
           S I HLH   LHH
Sbjct: 101 STITHLHIYDLHH 113


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 216  FNSIKFGINQREIIPIKYILRTRNIYIIIN 127
            FN +K+G+     +P  Y+L    IY + N
Sbjct: 999  FNCLKYGVIYYVTVPSMYLLLV--IYSVFN 1026


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 216  FNSIKFGINQREIIPIKYILRTRNIYIIIN 127
            FN +K+G+     +P  Y+L    IY + N
Sbjct: 999  FNCLKYGVIYYVTVPSMYLLLV--IYSVFN 1026


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +3

Query: 18  KSLLFCTPSLYSL*VWEISYSSVRAILVKRGTKFLLHLLLYR 143
           K + FC P+  +   + I +S+    LV     FL+ LL ++
Sbjct: 248 KKIEFCRPTFSAARFYGIDFSNTFLGLVGAVVTFLIVLLQFQ 289


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 572 FSGFVSFFHIFAL 610
           F G +SF HIFAL
Sbjct: 191 FLGNMSFAHIFAL 203


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 572 FSGFVSFFHIFAL 610
           F G +SF HIFAL
Sbjct: 191 FLGNMSFAHIFAL 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,534
Number of Sequences: 336
Number of extensions: 3377
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)