Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1266
         (677 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75543-13|CAI79192.1|  281|Caenorhabditis elegans Hypothetical p...    32   0.43 
Z75543-12|CAA99874.4|  280|Caenorhabditis elegans Hypothetical p...    32   0.43 
AY728061-1|AAU43722.1|  281|Caenorhabditis elegans cadmium-induc...    32   0.43 

>Z75543-13|CAI79192.1|  281|Caenorhabditis elegans Hypothetical
          protein K01D12.13b protein.
          Length = 281

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 10 HFKKVYYSALLLYILYKCGKFHTPPS 87
          H K ++ SA  +Y +YK  KF TPP+
Sbjct: 6  HSKLIFASAAAIYAVYKINKFFTPPT 31


>Z75543-12|CAA99874.4|  280|Caenorhabditis elegans Hypothetical
          protein K01D12.13a protein.
          Length = 280

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 10 HFKKVYYSALLLYILYKCGKFHTPPS 87
          H K ++ SA  +Y +YK  KF TPP+
Sbjct: 6  HSKLIFASAAAIYAVYKINKFFTPPT 31


>AY728061-1|AAU43722.1|  281|Caenorhabditis elegans
          cadmium-inducible lysosomal proteinCDR-7 protein.
          Length = 281

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 10 HFKKVYYSALLLYILYKCGKFHTPPS 87
          H K ++ SA  +Y +YK  KF TPP+
Sbjct: 6  HSKLIFASAAAIYAVYKINKFFTPPT 31


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,572,641
Number of Sequences: 27780
Number of extensions: 290552
Number of successful extensions: 599
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)