Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1265
(734 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 191 4e-49
SB_56| Best HMM Match : Actin (HMM E-Value=0) 191 4e-49
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 191 4e-49
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 190 8e-49
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 7e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 7e-27
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 5e-22
SB_54| Best HMM Match : Actin (HMM E-Value=0) 87 2e-17
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 72 6e-13
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 66 4e-11
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 64 1e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 8e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 38 0.011
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.73
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.73
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 31 1.3
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_147| Best HMM Match : LepA_C (HMM E-Value=0.73) 30 1.7
SB_5051| Best HMM Match : DUF1193 (HMM E-Value=0.88) 30 1.7
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 30 2.2
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 30 2.2
SB_29730| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 2.2
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.2
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 29 3.0
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 29 3.0
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 29 3.0
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 29 3.9
SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45) 29 3.9
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 3.9
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 3.9
SB_4468| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_28410| Best HMM Match : zf-CCCH (HMM E-Value=7.9e-05) 29 5.2
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 28 6.8
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_42662| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 28 9.0
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 28 9.0
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 191 bits (466), Expect = 4e-49
Identities = 95/123 (77%), Positives = 97/123 (78%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 116
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPCPSTKDTALPHAIL 614
EKMTQIMFETFN+PAMYVAIQAVLS P + ALPHAIL
Sbjct: 117 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL 176
Query: 615 RLD 623
RLD
Sbjct: 177 RLD 179
Score = 116 bits (280), Expect = 2e-26
Identities = 52/60 (86%), Positives = 58/60 (96%)
Frame = +1
Query: 91 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ ++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 191 bits (466), Expect = 4e-49
Identities = 95/123 (77%), Positives = 97/123 (78%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 116
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPCPSTKDTALPHAIL 614
EKMTQIMFETFN+PAMYVAIQAVLS P + ALPHAIL
Sbjct: 117 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL 176
Query: 615 RLD 623
RLD
Sbjct: 177 RLD 179
Score = 118 bits (283), Expect = 7e-27
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +1
Query: 91 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ ++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 191 bits (466), Expect = 4e-49
Identities = 95/123 (77%), Positives = 97/123 (78%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPCPSTKDTALPHAIL 614
EKMTQIMFETFN+PAMYVAIQAVLS P + ALPHAIL
Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL 177
Query: 615 RLD 623
RLD
Sbjct: 178 RLD 180
Score = 124 bits (298), Expect = 1e-28
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 190 bits (464), Expect = 8e-49
Identities = 94/123 (76%), Positives = 97/123 (78%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPCPSTKDTALPHAIL 614
EKMTQIMFETFN+PAMYVAIQAVLS P + ALPHAI+
Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAII 177
Query: 615 RLD 623
RLD
Sbjct: 178 RLD 180
Score = 119 bits (287), Expect = 2e-27
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 184 bits (448), Expect = 7e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAVLS 142
Score = 119 bits (287), Expect = 2e-27
Identities = 52/62 (83%), Positives = 59/62 (95%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYQ 586
LYASGRTTGIV+DSGDGVSHTVPIY+
Sbjct: 143 LYASGRTTGIVMDSGDGVSHTVPIYE 168
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 118 bits (283), Expect = 7e-27
Identities = 52/60 (86%), Positives = 58/60 (96%)
Frame = +1
Query: 91 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ ++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 356
EAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 67.3 bits (157), Expect = 1e-11
Identities = 43/76 (56%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYQGYRTPPRHPASGLSPVATSKTTSL-KILTGAPAT 685
LYASGRTTGIV+DSGDGV+HTVPIY+GY P H L T L KILT
Sbjct: 105 LYASGRTTGIVMDSGDGVTHTVPIYEGYALP--HAIIRLDLAGRDLTDYLMKILT-ERGY 161
Query: 686 SFTTTGRAGNRFRDIK 733
SFTTT RDIK
Sbjct: 162 SFTTTAER-EIVRDIK 176
Score = 52.0 bits (119), Expect = 5e-07
Identities = 31/65 (47%), Positives = 36/65 (55%)
Frame = +3
Query: 429 NREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPCPSTKDTALPHA 608
N + M +IMFETFN+PAMYVAIQAVLS P + ALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 609 ILRLD 623
I+RLD
Sbjct: 138 IIRLD 142
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 101 bits (243), Expect = 5e-22
Identities = 56/141 (39%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Frame = +3
Query: 207 SGRDGRYGTEGLLCRREAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 383
S + G + L+ EA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 384 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATV 560
VLLTE PLNP NREKM ++MFE + +Y+AIQAVL+ + ++ V + V
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGV 163
Query: 561 SPTPCPSTKDTALPHAILRLD 623
+ CP + ALPH RLD
Sbjct: 164 THI-CPVYEGFALPHLTRRLD 183
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +1
Query: 103 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGE 255
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VG+
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGD 59
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/58 (65%), Positives = 48/58 (82%)
Frame = +3
Query: 336 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 509
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMA 2186
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 210
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 58.8 bits (136), Expect = 4e-09
Identities = 34/75 (45%), Positives = 39/75 (52%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYQGYRTPPRHPASGLSPVATSKTTSLKILTGAPATS 688
LYASGRTTG V D GDGVSHTVP+Y GY P H + T L+ L S
Sbjct: 2187 LYASGRTTGTVFDCGDGVSHTVPVYDGYWLP--HATQRIDLAGRDLTHYLQRLVTERGYS 2244
Query: 689 FTTTGRAGNRFRDIK 733
F +T RD+K
Sbjct: 2245 FQSTAEQ-QIIRDLK 2258
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 71.7 bits (168), Expect = 6e-13
Identities = 35/80 (43%), Positives = 48/80 (60%)
Frame = +3
Query: 384 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVS 563
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLS
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 564 PTPCPSTKDTALPHAILRLD 623
P + A+PH+I+R D
Sbjct: 186 SHSVPIYEGFAMPHSIMRTD 205
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 65.7 bits (153), Expect = 4e-11
Identities = 39/75 (52%), Positives = 41/75 (54%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYQGYRTPPRHPASGLSPVATSKTTSLKILTGAPATS 688
LYASGRTTG+V DSGDGVSH VPIY+GY P H L T L L S
Sbjct: 21 LYASGRTTGVVFDSGDGVSHNVPIYEGYALP--HAILRLDLAGRDLTDYLMKLMTERGYS 78
Query: 689 FTTTGRAGNRFRDIK 733
FTTT RDIK
Sbjct: 79 FTTTAER-EIVRDIK 92
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/58 (48%), Positives = 32/58 (55%)
Frame = +3
Query: 450 IMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPCPSTKDTALPHAILRLD 623
IMFE FN+PA+YVAIQAVLS + P + ALPHAILRLD
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLD 58
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/72 (36%), Positives = 46/72 (63%)
Frame = +3
Query: 294 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 473
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 474 PAMYVAIQAVLS 509
PA ++ +VL+
Sbjct: 63 PAFFLCKNSVLT 74
Score = 33.5 bits (73), Expect = 0.18
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 512 YASGRTTGIVLDSGDGVSHTVPIYQGY 592
+A+GR+ G+V+DSG + VP++ GY
Sbjct: 76 FANGRSNGLVIDSGATQTSAVPVHDGY 102
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 210
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 79 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 225
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYQGY 592
LYASG T G+ L SG + IY+G+
Sbjct: 772 LYASGMTLGVCLSSGFSCTQAAVIYEGH 799
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 401
EA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 289 EAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.42
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 530 TGIVLDSGDGVSHTVPI 580
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 207 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 91
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 37.5 bits (83), Expect = 0.011
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +2
Query: 530 TGIVLDSGDGVSHTVPIYQGY 592
TG V+DSGDGV+H +P+ +GY
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGY 82
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 210 GRDGRYGTEGLLCRREAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 380
GR G + GL + S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 381 EEHPVLLTEAPLNPKANRE 437
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 177 VPLDRGKAPPSGRDGRYGTEGLLCRREAQSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 350
V L + +GR+ G+ +CR++A ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRKKAP----LITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 351 TFYN 362
T N
Sbjct: 497 TCPN 500
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 410 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 502
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_147| Best HMM Match : LepA_C (HMM E-Value=0.73)
Length = 611
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 596 TPPRHPASGLSPVATSKTTSLKILTGAPATSFTTTGRA 709
TPP P G+SP+A+ ++S L+ P++ +T RA
Sbjct: 264 TPPT-PPEGISPIASRHSSSSSSLSSVPSSFLASTPRA 300
>SB_5051| Best HMM Match : DUF1193 (HMM E-Value=0.88)
Length = 634
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 619 WT*PGRDL--QDYLIEDPHRSAGYFVHYHRPSGKSFP 723
W PGR L + E P SA Y +HY P+ + FP
Sbjct: 531 WKMPGRYLTGNSFTTELPVGSANYKIHYQLPNPRGFP 567
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/75 (28%), Positives = 30/75 (40%)
Frame = +3
Query: 390 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPT 569
PVL A P A + TQ + P ++ V + P PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 570 PCPSTKDTALPHAIL 614
P + T +P ++
Sbjct: 81 PVVTDAPTTVPPPVV 95
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 402 TEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTP 572
T+AP L PK T + ET + PA+ +A + + V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 573 CPSTKDTALP 602
+T+ TA P
Sbjct: 575 TAATEITAAP 584
>SB_29730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4275
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 216 DGRYGTEGLLCRREAQSKRGILTLKYPIEHGIVTNWDDMEK-IWHHTFYNELRVAPEEHP 392
D R +L +REA + G +P H WD++ K ++ + E+ + P P
Sbjct: 2939 DHRGAWNTMLLKREALQQTGQYLRLFPNLHNNEPYWDELAKEVYRYIGNKEVPLLPVHRP 2998
Query: 393 VLLTEAPLNPKANREKMTQIMFETF 467
V E+ K E+ +++ E F
Sbjct: 2999 V-EDESASEKKEQDEQASRVKIEWF 3022
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
V+LSH + H M D +HG RS SCET L T
Sbjct: 224 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 294 PIEHGIVTNWDDMEKIWHHTFYNE 365
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 97 EVAALVVDNGSGMCKAGFAGDDAPRAV 177
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 316 VTIPCSMGYLRVRIPLLLCASLLHKSPSVP 227
V PC M LRVR+ C S+LH + P
Sbjct: 60 VACPCCMSLLRVRVVCPCCMSVLHVRVACP 89
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
V+LSH + H M D +HG RS SCET L T
Sbjct: 419 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
V+LSH + H M D +HG RS SCET L T
Sbjct: 282 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
V+LSH + H M D +HG RS SCET L T
Sbjct: 260 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/88 (23%), Positives = 34/88 (38%)
Frame = +3
Query: 351 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVP 530
T E VAPE + E ++P+ T + ET TP VA + ++ V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 531 PVSCWTPATVSPTPCPSTKDTALPHAIL 614
+ TV+P + + T P +
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAPETTM 4267
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/88 (23%), Positives = 34/88 (38%)
Frame = +3
Query: 351 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVP 530
T E VAPE + E+ L + +T + ET TP VA + + + P
Sbjct: 4915 TMVPETTVAPET--TMAPESTLAAETTMAPVTTVASETTKTPDTTVAPETTMVPEGTLAP 4972
Query: 531 PVSCWTPATVSPTPCPSTKDTALPHAIL 614
+ TV+P + + T P +
Sbjct: 4973 ETTMAPETTVAPETTMAPETTVAPETTM 5000
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
V+LSH + H M D +HG RS SCET L T
Sbjct: 136 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +3
Query: 390 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVV---PPVSCWTPATV 560
P L+T PL +T NTP + +++ T P+V PP+ TP V
Sbjct: 34 PSLVTTTPLLVTTTPSLVTTTPLLVTNTPPLDTTTLPLVTITPPLVITAPPLVTTTPPLV 93
Query: 561 SPTP 572
+ TP
Sbjct: 94 TTTP 97
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = -2
Query: 388 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS--LLHKSPSVPYRPS 215
CS + + C + ++V CS + V + ++C+ + H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 214 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 122
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45)
Length = 481
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +3
Query: 459 ETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPCPSTKD 590
+ + P + +Q +++ P + P +C TP +SP T+D
Sbjct: 288 DNYLRPTNHATVQTIVNSLDPSIAPKACCTPNELSPISILYTED 331
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Frame = +3
Query: 363 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVP 530
E VAPE T AP + PK +T + ET P VA + ++ V P
Sbjct: 1425 ETTVAPEITAATETTAAPDITVAPKTTAAPVTTLAPETTAAPDATVAPETKMAPETTVAP 1484
Query: 531 PVSCWTPATVSPTPCPSTKDTALPHAIL 614
+ TV+P + + TA+P L
Sbjct: 1485 ETTAALETTVAPESTLAAETTAVPETTL 1512
Score = 27.9 bits (59), Expect = 9.0
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Frame = +3
Query: 363 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVP 530
E APE V T AP + P+ +T + ET PA A++ + +VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 531 PVSCWTPATVSP--TPCPST 584
+ + TV+P T P+T
Sbjct: 1383 ETTASSETTVAPETTDAPAT 1402
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
++LSH + H M D +HG RS SCET L T
Sbjct: 184 IVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_4468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1513
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = -2
Query: 259 ASLLHKSPSVPYRPSRPD---GGAFPRSRGTRREEHH 158
ASL H++PS P P P G F + G +R +H
Sbjct: 618 ASLSHETPSTPQTPRSPTSSMSGPFDNAFGRKRSPYH 654
>SB_28410| Best HMM Match : zf-CCCH (HMM E-Value=7.9e-05)
Length = 905
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 494 PSRALLYASGRTTGIVLDSGDGVSHTVPIYQGYRTPPRHPASGLSPVATSK-TTSLKILT 670
P + ++ SG+TT + S + + + Q + + + + TS+ TTS +LT
Sbjct: 547 PKKPTMFQSGKTTFVRKPSEAATTESSTVPQTVVSETKSSTTTATITTTSEVTTSAAVLT 606
Query: 671 GAPATSFTTTGRA 709
APA + T + A
Sbjct: 607 VAPAATTTASAIA 619
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = +3
Query: 408 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPCPS 581
A P A + + +NTP I + P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMP--PISSTPYQAPPTLPPTTLTTPSWSQPVPVPS 943
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +2
Query: 368 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALLYASGRTTGIVLD 547
ACR R P P P+ + ++D D +I R P R ++ +T G+ +
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260
Query: 548 SGDGVSHTVPI 580
G H VPI
Sbjct: 261 ITGGKEHGVPI 271
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 444 TQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTP 572
+Q+ E +N P+ + CT +P +TP T TP
Sbjct: 611 SQVNSERYNAPSQSPCTERYTPCTERYIPCTERYTPCTERYTP 653
>SB_42662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1054
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = -2
Query: 595 AVSLVDGHGVGDTVAGVQHDTGG--TTGRVQESTAWMATY 482
+ +L GHGV G TGG + GRV +W+ Y
Sbjct: 579 SATLFSGHGVISASGGAGSGTGGGGSGGRVAAHVSWLREY 618
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Frame = +3
Query: 351 TFYNELRVAPE----EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTR 518
T +E VAP+ L E + P+ + + ET P VA + +
Sbjct: 487 TVASETTVAPKTTAASEATLAPETTVAPETTAAPESTLALETTAAPVTTVAPETTAAPDT 546
Query: 519 PVVPPVSCWTPATVSP--TPCPST 584
P+VP + +TV+P T P T
Sbjct: 547 PIVPETTVALESTVAPEITVVPET 570
>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
Length = 705
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +2
Query: 515 ASGRTTGIVLDSGDGVSHTVPIYQGYRTPPRHPASGLSPVAT--SKTTSLKILTGAPATS 688
AS T G+V +G + P G T PA+ +P T TT TGAP T+
Sbjct: 306 ASPTTAGVVTTTGAPSTTRAPPTTGAVTTTGAPATTGAPATTVAPTTTGAPTTTGAPTTT 365
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,921,643
Number of Sequences: 59808
Number of extensions: 617424
Number of successful extensions: 2551
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 2048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2523
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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