Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1265
(734 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 192 2e-49
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 192 3e-49
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 192 3e-49
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 190 8e-49
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 189 1e-48
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 189 1e-48
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 188 3e-48
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 188 3e-48
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 188 3e-48
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 172 2e-43
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 163 8e-41
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 159 2e-39
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 103 2e-22
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 93 2e-19
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 80 1e-15
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 2e-10
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 62 4e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 55 6e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 49 4e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.11
At1g15780.1 68414.m01893 expressed protein 33 0.20
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 0.60
At5g53320.1 68418.m06627 leucine-rich repeat transmembrane prote... 29 4.2
At2g32300.1 68415.m03949 uclacyanin I identical to uclacyanin I ... 29 4.2
At1g58370.1 68414.m06640 glycosyl hydrolase family 10 protein / ... 29 4.2
At1g20640.2 68414.m02584 RWP-RK domain-containing protein simila... 29 4.2
At1g20640.1 68414.m02583 RWP-RK domain-containing protein simila... 29 4.2
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 4.2
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 4.2
At5g06050.1 68418.m00670 dehydration-responsive protein-related ... 28 5.6
At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit, ... 28 5.6
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 28 7.4
At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family p... 28 7.4
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 9.8
At2g47500.1 68415.m05929 kinesin motor protein-related 27 9.8
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 192 bits (468), Expect = 2e-49
Identities = 98/124 (79%), Positives = 102/124 (82%), Gaps = 1/124 (0%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611
EKMTQIMFETFNTPAMYVAIQAVLS + + VS T P + ALPHAI
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAI 177
Query: 612 LRLD 623
LRLD
Sbjct: 178 LRLD 181
Score = 101 bits (243), Expect = 4e-22
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 192 bits (467), Expect = 3e-49
Identities = 98/124 (79%), Positives = 101/124 (81%), Gaps = 1/124 (0%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611
EKMTQIMFETFNTPAMYVAIQAVLS + + VS T P + ALPHAI
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAI 177
Query: 612 LRLD 623
LRLD
Sbjct: 178 LRLD 181
Score = 101 bits (243), Expect = 4e-22
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 192 bits (467), Expect = 3e-49
Identities = 98/124 (79%), Positives = 101/124 (81%), Gaps = 1/124 (0%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611
EKMTQIMFETFNTPAMYVAIQAVLS + + VS T P + ALPHAI
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAI 177
Query: 612 LRLD 623
LRLD
Sbjct: 178 LRLD 181
Score = 101 bits (243), Expect = 4e-22
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 190 bits (463), Expect = 8e-49
Identities = 97/124 (78%), Positives = 101/124 (81%), Gaps = 1/124 (0%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611
EKMTQIMFETFN PAMYVAIQAVLS + + VS T P + ALPHAI
Sbjct: 119 EKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAI 177
Query: 612 LRLD 623
LRLD
Sbjct: 178 LRLD 181
Score = 101 bits (243), Expect = 4e-22
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 189 bits (461), Expect = 1e-48
Identities = 96/124 (77%), Positives = 100/124 (80%), Gaps = 1/124 (0%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611
EKMTQIMFETFN PAMYVAIQAVLS + + VS T P + ALPHAI
Sbjct: 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAI 177
Query: 612 LRLD 623
LRLD
Sbjct: 178 LRLD 181
Score = 101 bits (243), Expect = 4e-22
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 189 bits (461), Expect = 1e-48
Identities = 96/124 (77%), Positives = 100/124 (80%), Gaps = 1/124 (0%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611
EKMTQIMFETFN PAMYVAIQAVLS + + VS T P + ALPHAI
Sbjct: 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAI 177
Query: 612 LRLD 623
LRLD
Sbjct: 178 LRLD 181
Score = 101 bits (243), Expect = 4e-22
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 188 bits (459), Expect = 3e-48
Identities = 94/124 (75%), Positives = 102/124 (82%), Gaps = 1/124 (0%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611
EKMTQIMFETFN+PAMYVAIQAVLS + + VS T P + +LPHAI
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAI 177
Query: 612 LRLD 623
LRLD
Sbjct: 178 LRLD 181
Score = 97.5 bits (232), Expect = 8e-21
Identities = 41/59 (69%), Positives = 51/59 (86%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG+ ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 188 bits (459), Expect = 3e-48
Identities = 94/124 (75%), Positives = 102/124 (82%), Gaps = 1/124 (0%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611
EKMTQIMFETFN+PAMYVAIQAVLS + + VS T P + +LPHAI
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAI 177
Query: 612 LRLD 623
LRLD
Sbjct: 178 LRLD 181
Score = 97.5 bits (232), Expect = 8e-21
Identities = 41/59 (69%), Positives = 51/59 (86%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG+ ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 188 bits (459), Expect = 3e-48
Identities = 94/124 (75%), Positives = 102/124 (82%), Gaps = 1/124 (0%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611
EKMTQIMFETFN+PAMYVAIQAVLS + + VS T P + +LPHAI
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAI 177
Query: 612 LRLD 623
LRLD
Sbjct: 178 LRLD 181
Score = 97.5 bits (232), Expect = 8e-21
Identities = 41/59 (69%), Positives = 51/59 (86%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG+ ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 172 bits (418), Expect = 2e-43
Identities = 84/124 (67%), Positives = 98/124 (79%), Gaps = 1/124 (0%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NR
Sbjct: 60 EAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNR 119
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611
EKMTQIMFE+F P+MY+ IQAVLS + + + VS T P + ALPHAI
Sbjct: 120 EKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHT-VPIYEGYALPHAI 178
Query: 612 LRLD 623
LRLD
Sbjct: 179 LRLD 182
Score = 96.3 bits (229), Expect = 2e-20
Identities = 41/59 (69%), Positives = 52/59 (88%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VG+ +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 163 bits (397), Expect = 8e-41
Identities = 77/123 (62%), Positives = 93/123 (75%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+R
Sbjct: 14 DAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADR 73
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPCPSTKDTALPHAIL 614
EKMTQIMFETF P+MY+ +QA LS + P + +ALPHAIL
Sbjct: 74 EKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAIL 133
Query: 615 RLD 623
RLD
Sbjct: 134 RLD 136
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 159 bits (385), Expect = 2e-39
Identities = 85/138 (61%), Positives = 96/138 (69%), Gaps = 1/138 (0%)
Frame = +3
Query: 213 RDGRYGTEGLLCRREAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 392
RDG E + E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 393 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPT 569
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL + V VS T
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 570 PCPSTKDTALPHAILRLD 623
P + ALPH ILRLD
Sbjct: 154 -VPVYEGYALPHGILRLD 170
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRA 267
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVGE A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 103 bits (246), Expect = 2e-22
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = +3
Query: 279 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 458
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 459 ETFNTPAMYVAIQAVLS 509
E +N +++ IQAVL+
Sbjct: 126 EKYNFAGVFIQIQAVLT 142
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGE 255
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VGE
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
Score = 47.6 bits (108), Expect = 9e-06
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYQGYRTP 601
LYA G TG+V+DSGDGV+H VP+ GY P
Sbjct: 143 LYAQGLLTGLVIDSGDGVTHVVPVVDGYSFP 173
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 93.1 bits (221), Expect = 2e-19
Identities = 39/75 (52%), Positives = 52/75 (69%)
Frame = +3
Query: 285 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 464
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 465 FNTPAMYVAIQAVLS 509
FN P +Y+A+ +VL+
Sbjct: 146 FNVPGLYIAVNSVLA 160
Score = 35.9 bits (79), Expect = 0.028
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 106 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 192
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
Score = 35.1 bits (77), Expect = 0.049
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 530 TGIVLDSGDGVSHTVPIYQGY 592
TG+V+D GDG +H VP+ +GY
Sbjct: 173 TGVVVDVGDGATHVVPVAEGY 193
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 80.2 bits (189), Expect = 1e-15
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +3
Query: 267 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 446
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 447 QIMFETFNTPAMYVAIQAVLS 509
++MFE + PA+++A VL+
Sbjct: 145 ELMFEKYKVPALFMAKNPVLT 165
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 195
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 512 YASGRTTGIVLDSGDGVSHTVPIYQGY 592
+A+GR T +V+D G G + P++ GY
Sbjct: 167 FATGRATSLVVDCGGGSTTISPVHDGY 193
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 267 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 440
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 195
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 470
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 471 TPAMYVAIQAVLS 509
Y + QAVLS
Sbjct: 117 VSGFYASEQAVLS 129
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 106 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 198
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 54.8 bits (126), Expect = 6e-08
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +3
Query: 285 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 464
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 465 FNTPAMYVA 491
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 201
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 470
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 471 TPAMYVAIQAVLS 509
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 210
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 230 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 93
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g15780.1 68414.m01893 expressed protein
Length = 1335
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYQGYRTPPRHPASGLSPVATSKTTS 655
L ASG+ TG +L + V +YQ RT P P+S L A +++ +
Sbjct: 541 LQASGQVTGSLLPPQNVVDQQRQLYQSQRTLPEMPSSSLDSTAQTESAN 589
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 31.5 bits (68), Expect = 0.60
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +2
Query: 407 GSPQPQGQQREDDPDHV---RNIQHARHVRRHPSRALLY 514
GSP+ +G + E+D D + NI+H + +H + A+LY
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLY 129
>At5g53320.1 68418.m06627 leucine-rich repeat transmembrane protein
kinase, putative
Length = 601
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Frame = -2
Query: 646 LGGRDRAKSRRRMAWGSAVSLVDGHGVGDTVAGVQHDTGG--TTGRVQESTAWMATYMAG 473
L G+ + R+R+ W + +++V +G VA + +GG G ++ S ++ G
Sbjct: 392 LHGQKGLRDRKRLEWETRLNMV--YGTARGVAHIHSQSGGKLVHGNIKSSNIFLNGKGYG 449
Query: 472 VLNVSNMIWVIFSL--LALGLRGASVSRT 392
++ + M ++ SL A+G R ++ T
Sbjct: 450 CISGTGMATLMHSLPRHAVGYRAPEITDT 478
>At2g32300.1 68415.m03949 uclacyanin I identical to uclacyanin I
GI:3399767 from [Arabidopsis thaliana]; contains Pfam
profile PF02298: Plastocyanin-like domain; identical to
cDNA uclacyanin I GI:3399766
Length = 261
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +2
Query: 599 PPRHPASGLSPVATSKTTSLKILTGAPATSFTTT 700
PP PA LSP AT+ TSL + G+P +S +TT
Sbjct: 180 PPLSPA--LSP-ATAAGTSLPLFPGSPGSSSSTT 210
>At1g58370.1 68414.m06640 glycosyl hydrolase family 10 protein /
carbohydrate-binding domain-containing protein similar
to (1,4)-beta-xylan endohydrolase GI:5306060 from
[Triticum aestivum] ; contains Pfam profiles PF00331:
Glycosyl hydrolase family 10, PF02018: Carbohydrate
binding domain
Length = 917
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 425 GQQREDDPDHVRNIQHARHVRRHPSRALLYASGRTTGIVL 544
G Q E + D I + + ++PS+AL+Y G ++GI L
Sbjct: 478 GGQVEINDDRWHEIGGSFRIEKNPSKALVYVQGPSSGIDL 517
>At1g20640.2 68414.m02584 RWP-RK domain-containing protein similar
to nodule inception protein GI:6448579 from (Lotus
japonicus); contains Pfam profile: PF02042 RWP-RK domain
Length = 844
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +2
Query: 446 PDHVRNIQHARHVRRHPSRALLYASGRTTGI--VLDSGDGVSHTVPIYQGYRTPPRHPAS 619
P ++ I ++R PSR + I V+DS GVS +PI Y P +
Sbjct: 583 PTTLKRICRQHGIQRWPSRKIKKVGHSLQKIQRVIDSVQGVSGPLPIGSFYANFPNLVSQ 642
Query: 620 GLSPVATSKTT 652
P +KTT
Sbjct: 643 SQEPSQQAKTT 653
>At1g20640.1 68414.m02583 RWP-RK domain-containing protein similar
to nodule inception protein GI:6448579 from (Lotus
japonicus); contains Pfam profile: PF02042 RWP-RK domain
Length = 844
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +2
Query: 446 PDHVRNIQHARHVRRHPSRALLYASGRTTGI--VLDSGDGVSHTVPIYQGYRTPPRHPAS 619
P ++ I ++R PSR + I V+DS GVS +PI Y P +
Sbjct: 583 PTTLKRICRQHGIQRWPSRKIKKVGHSLQKIQRVIDSVQGVSGPLPIGSFYANFPNLVSQ 642
Query: 620 GLSPVATSKTT 652
P +KTT
Sbjct: 643 SQEPSQQAKTT 653
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 279 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 440
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 279 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 440
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g06050.1 68418.m00670 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 682
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 545 DSGDGVSHTVPIYQGYRTPPRHPAS 619
+ G G++ TVPI QGYR+P P S
Sbjct: 187 NDGMGLNCTVPIPQGYRSPIPWPRS 211
>At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit,
putative similar to gi:2827141 cellulose synthase
catalytic subunit, Arabidopsis thaliana (Ath-A)
Length = 1088
Score = 28.3 bits (60), Expect = 5.6
Identities = 23/78 (29%), Positives = 31/78 (39%)
Frame = +2
Query: 368 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALLYASGRTTGIVLD 547
AC GT GSP+ +G + +DD D + + + H + A LY TG
Sbjct: 80 ACPQCGTRYKRIKGSPRVEGDEEDDDIDDLEHEFYGMD-PEHVTEAALYYMRLNTG---R 135
Query: 548 SGDGVSHTVPIYQGYRTP 601
D VSH G P
Sbjct: 136 GTDEVSHLYSASPGSEVP 153
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +2
Query: 485 RRHPSRALLYASGRTTGIVLDSGDGVSHTVPIYQGYRTPPRHPASGLS 628
+R + L A+GR + D GD S PIY + P R + S
Sbjct: 443 KREAFKNQLLAAGRGLPVADDVGDATSSKRPIYANKKKPSRQKGNDTS 490
>At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 315
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +3
Query: 390 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPT 569
P L+T+ P++PK Q +T A Q L+ P PP P P
Sbjct: 191 PQLVTKEPISPKPLSSPRKQQQLQTETKEAKASVSQTKLTTLTPPGPP-----PPPPPPP 245
Query: 570 PCPST 584
P P+T
Sbjct: 246 PSPTT 250
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 206 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 84
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g47500.1 68415.m05929 kinesin motor protein-related
Length = 974
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2
Query: 259 ASLLHKSPSVPYRPSR 212
ASL HK+P VPYR S+
Sbjct: 656 ASLAHKNPHVPYRNSK 671
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,981,745
Number of Sequences: 28952
Number of extensions: 401865
Number of successful extensions: 1358
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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