BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1265 (734 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 192 2e-49 At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 192 3e-49 At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 192 3e-49 At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 190 8e-49 At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 189 1e-48 At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 189 1e-48 At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 188 3e-48 At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 188 3e-48 At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 188 3e-48 At2g42100.1 68415.m05205 actin, putative very strong similarity ... 172 2e-43 At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 163 8e-41 At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 159 2e-39 At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 103 2e-22 At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 93 2e-19 At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 80 1e-15 At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 2e-10 At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 62 4e-10 At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 55 6e-08 At3g12380.1 68416.m01543 actin/actin-like family protein similar... 49 4e-06 At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.11 At1g15780.1 68414.m01893 expressed protein 33 0.20 At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 0.60 At5g53320.1 68418.m06627 leucine-rich repeat transmembrane prote... 29 4.2 At2g32300.1 68415.m03949 uclacyanin I identical to uclacyanin I ... 29 4.2 At1g58370.1 68414.m06640 glycosyl hydrolase family 10 protein / ... 29 4.2 At1g20640.2 68414.m02584 RWP-RK domain-containing protein simila... 29 4.2 At1g20640.1 68414.m02583 RWP-RK domain-containing protein simila... 29 4.2 At1g16690.2 68414.m01999 transcription factor-related similar to... 29 4.2 At1g16690.1 68414.m01998 transcription factor-related similar to... 29 4.2 At5g06050.1 68418.m00670 dehydration-responsive protein-related ... 28 5.6 At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit, ... 28 5.6 At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 28 7.4 At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family p... 28 7.4 At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 9.8 At2g47500.1 68415.m05929 kinesin motor protein-related 27 9.8 >At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496 Actin 11 {Arabidopsis thaliana} Length = 377 Score = 192 bits (468), Expect = 2e-49 Identities = 98/124 (79%), Positives = 102/124 (82%), Gaps = 1/124 (0%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434 EAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR Sbjct: 59 EAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118 Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611 EKMTQIMFETFNTPAMYVAIQAVLS + + VS T P + ALPHAI Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAI 177 Query: 612 LRLD 623 LRLD Sbjct: 178 LRLD 181 Score = 101 bits (243), Expect = 4e-22 Identities = 45/59 (76%), Positives = 52/59 (88%) Frame = +1 Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63 >At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 Actin 4 {Arabidopsis thaliana} Length = 377 Score = 192 bits (467), Expect = 3e-49 Identities = 98/124 (79%), Positives = 101/124 (81%), Gaps = 1/124 (0%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434 EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118 Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611 EKMTQIMFETFNTPAMYVAIQAVLS + + VS T P + ALPHAI Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAI 177 Query: 612 LRLD 623 LRLD Sbjct: 178 LRLD 181 Score = 101 bits (243), Expect = 4e-22 Identities = 45/59 (76%), Positives = 52/59 (88%) Frame = +1 Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63 >At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497 Actin 12 {Arabidopsis thaliana} Length = 377 Score = 192 bits (467), Expect = 3e-49 Identities = 98/124 (79%), Positives = 101/124 (81%), Gaps = 1/124 (0%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434 EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118 Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611 EKMTQIMFETFNTPAMYVAIQAVLS + + VS T P + ALPHAI Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAI 177 Query: 612 LRLD 623 LRLD Sbjct: 178 LRLD 181 Score = 101 bits (243), Expect = 4e-22 Identities = 45/59 (76%), Positives = 52/59 (88%) Frame = +1 Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63 >At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana} Length = 377 Score = 190 bits (463), Expect = 8e-49 Identities = 97/124 (78%), Positives = 101/124 (81%), Gaps = 1/124 (0%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434 EAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR Sbjct: 59 EAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118 Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611 EKMTQIMFETFN PAMYVAIQAVLS + + VS T P + ALPHAI Sbjct: 119 EKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAI 177 Query: 612 LRLD 623 LRLD Sbjct: 178 LRLD 181 Score = 101 bits (243), Expect = 4e-22 Identities = 45/59 (76%), Positives = 52/59 (88%) Frame = +1 Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63 >At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 Actin 3 {Arabidopsis thaliana}; supported by full-length cDNA: Ceres: 19581. Length = 377 Score = 189 bits (461), Expect = 1e-48 Identities = 96/124 (77%), Positives = 100/124 (80%), Gaps = 1/124 (0%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434 EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANR Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANR 118 Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611 EKMTQIMFETFN PAMYVAIQAVLS + + VS T P + ALPHAI Sbjct: 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAI 177 Query: 612 LRLD 623 LRLD Sbjct: 178 LRLD 181 Score = 101 bits (243), Expect = 4e-22 Identities = 45/59 (76%), Positives = 52/59 (88%) Frame = +1 Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63 >At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 Actin 1 (Actin 3) {Arabidopsis thaliana} Length = 377 Score = 189 bits (461), Expect = 1e-48 Identities = 96/124 (77%), Positives = 100/124 (80%), Gaps = 1/124 (0%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434 EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANR Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANR 118 Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611 EKMTQIMFETFN PAMYVAIQAVLS + + VS T P + ALPHAI Sbjct: 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAI 177 Query: 612 LRLD 623 LRLD Sbjct: 178 LRLD 181 Score = 101 bits (243), Expect = 4e-22 Identities = 45/59 (76%), Positives = 52/59 (88%) Frame = +1 Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63 >At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 Length = 377 Score = 188 bits (459), Expect = 3e-48 Identities = 94/124 (75%), Positives = 102/124 (82%), Gaps = 1/124 (0%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434 EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANR Sbjct: 59 EAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118 Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611 EKMTQIMFETFN+PAMYVAIQAVLS + + VS T P + +LPHAI Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAI 177 Query: 612 LRLD 623 LRLD Sbjct: 178 LRLD 181 Score = 97.5 bits (232), Expect = 8e-21 Identities = 41/59 (69%), Positives = 51/59 (86%) Frame = +1 Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270 +++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG+ ++K Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63 >At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 Length = 371 Score = 188 bits (459), Expect = 3e-48 Identities = 94/124 (75%), Positives = 102/124 (82%), Gaps = 1/124 (0%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434 EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANR Sbjct: 59 EAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118 Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611 EKMTQIMFETFN+PAMYVAIQAVLS + + VS T P + +LPHAI Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAI 177 Query: 612 LRLD 623 LRLD Sbjct: 178 LRLD 181 Score = 97.5 bits (232), Expect = 8e-21 Identities = 41/59 (69%), Positives = 51/59 (86%) Frame = +1 Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270 +++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG+ ++K Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63 >At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 Actin 8 {Arabidopsis thaliana}; nearly identical to SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and to At3g18780 Length = 377 Score = 188 bits (459), Expect = 3e-48 Identities = 94/124 (75%), Positives = 102/124 (82%), Gaps = 1/124 (0%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434 EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANR Sbjct: 59 EAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118 Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611 EKMTQIMFETFN+PAMYVAIQAVLS + + VS T P + +LPHAI Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAI 177 Query: 612 LRLD 623 LRLD Sbjct: 178 LRLD 181 Score = 97.5 bits (232), Expect = 8e-21 Identities = 41/59 (69%), Positives = 51/59 (86%) Frame = +1 Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270 +++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG+ ++K Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63 >At2g42100.1 68415.m05205 actin, putative very strong similarity to SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493 Actin 3 {Arabidopsis thaliana}; contains Pfam profile PF00022: Actin Length = 378 Score = 172 bits (418), Expect = 2e-43 Identities = 84/124 (67%), Positives = 98/124 (79%), Gaps = 1/124 (0%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434 EAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NR Sbjct: 60 EAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNR 119 Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPCPSTKDTALPHAI 611 EKMTQIMFE+F P+MY+ IQAVLS + + + VS T P + ALPHAI Sbjct: 120 EKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHT-VPIYEGYALPHAI 178 Query: 612 LRLD 623 LRLD Sbjct: 179 LRLD 182 Score = 96.3 bits (229), Expect = 2e-20 Identities = 41/59 (69%), Positives = 52/59 (88%) Frame = +1 Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270 +E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VG+ +A+ Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64 >At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Arabidopsis thaliana] gi|9293903|dbj|BAB01806 Length = 329 Score = 163 bits (397), Expect = 8e-41 Identities = 77/123 (62%), Positives = 93/123 (75%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434 +A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+R Sbjct: 14 DAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADR 73 Query: 435 EKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPCPSTKDTALPHAIL 614 EKMTQIMFETF P+MY+ +QA LS + P + +ALPHAIL Sbjct: 74 EKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAIL 133 Query: 615 RLD 623 RLD Sbjct: 134 RLD 136 >At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin 11 {Arabidopsis thaliana}; contains Pfam profile PF00022: Actin Length = 366 Score = 159 bits (385), Expect = 2e-39 Identities = 85/138 (61%), Positives = 96/138 (69%), Gaps = 1/138 (0%) Frame = +3 Query: 213 RDGRYGTEGLLCRREAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 392 RDG E + E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93 Query: 393 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPT 569 VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL + V VS T Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153 Query: 570 PCPSTKDTALPHAILRLD 623 P + ALPH ILRLD Sbjct: 154 -VPVYEGYALPHGILRLD 170 Score = 59.3 bits (137), Expect = 3e-09 Identities = 28/53 (52%), Positives = 35/53 (66%) Frame = +1 Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRA 267 +V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVGE A Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51 >At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly identical to actin-related protein 2 (ARP2) [Arabidopsis thaliana] GI:3818624; contains Pfam profile PF00022: Actin Length = 389 Score = 103 bits (246), Expect = 2e-22 Identities = 41/77 (53%), Positives = 56/77 (72%) Frame = +3 Query: 279 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 458 L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125 Query: 459 ETFNTPAMYVAIQAVLS 509 E +N +++ IQAVL+ Sbjct: 126 EKYNFAGVFIQIQAVLT 142 Score = 50.4 bits (115), Expect = 1e-06 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%) Frame = +1 Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGE 255 +V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VGE Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57 Score = 47.6 bits (108), Expect = 9e-06 Identities = 19/31 (61%), Positives = 23/31 (74%) Frame = +2 Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYQGYRTP 601 LYA G TG+V+DSGDGV+H VP+ GY P Sbjct: 143 LYAQGLLTGLVIDSGDGVTHVVPVVDGYSFP 173 >At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical to actin-related protein 3 (ARP3) [Arabidopsis thaliana] GI:21427461; contains Pfam profile PF00022: Actin Length = 427 Score = 93.1 bits (221), Expect = 2e-19 Identities = 39/75 (52%), Positives = 52/75 (69%) Frame = +3 Query: 285 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 464 L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145 Query: 465 FNTPAMYVAIQAVLS 509 FN P +Y+A+ +VL+ Sbjct: 146 FNVPGLYIAVNSVLA 160 Score = 35.9 bits (79), Expect = 0.028 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = +1 Query: 106 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 192 A+V+DNG+G K GFAG+ P + P++V Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36 Score = 35.1 bits (77), Expect = 0.049 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = +2 Query: 530 TGIVLDSGDGVSHTVPIYQGY 592 TG+V+D GDG +H VP+ +GY Sbjct: 173 TGVVVDVGDGATHVVPVAEGY 193 >At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary identical to actin-related protein 4 (ARP4) [Arabidopsis thaliana] GI:21427463; contains Pfam profile PF00022: Actin; supporting cDNA gi|21427462|gb|AF507912.1| Length = 441 Score = 80.2 bits (189), Expect = 1e-15 Identities = 34/81 (41%), Positives = 53/81 (65%) Frame = +3 Query: 267 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 446 +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144 Query: 447 QIMFETFNTPAMYVAIQAVLS 509 ++MFE + PA+++A VL+ Sbjct: 145 ELMFEKYKVPALFMAKNPVLT 165 Score = 56.8 bits (131), Expect = 1e-08 Identities = 23/34 (67%), Positives = 31/34 (91%) Frame = +1 Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 195 +EV+A+VVD GS CKAG+AG+DAP+AVFPS++G Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38 Score = 30.7 bits (66), Expect = 1.0 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +2 Query: 512 YASGRTTGIVLDSGDGVSHTVPIYQGY 592 +A+GR T +V+D G G + P++ GY Sbjct: 167 FATGRATSLVVDCGGGSTTISPVHDGY 193 >At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical to actin-related protein 5 (ARP5) GI:21489922 from [Arabidopsis thaliana] Length = 145 Score = 62.9 bits (146), Expect = 2e-10 Identities = 26/58 (44%), Positives = 37/58 (63%) Frame = +3 Query: 267 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 440 +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136 Score = 57.2 bits (132), Expect = 1e-08 Identities = 24/34 (70%), Positives = 31/34 (91%) Frame = +1 Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 195 +EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38 >At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical to actin-related protein 7 (ARP7) [Arabidopsis thaliana] GI:21427469; contains Pfam profile PF00022: Actin Length = 363 Score = 62.1 bits (144), Expect = 4e-10 Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = +3 Query: 294 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 470 PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116 Query: 471 TPAMYVAIQAVLS 509 Y + QAVLS Sbjct: 117 VSGFYASEQAVLS 129 Score = 27.5 bits (58), Expect = 9.8 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +1 Query: 106 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 198 ALVVD GS KAG A D +P + PS + R Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34 >At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly identical to actin-related protein 6 (ARP6) [Arabidopsis thaliana] GI:21427467; contains Pfam profile PF00022: Actin Length = 421 Score = 54.8 bits (126), Expect = 6e-08 Identities = 24/69 (34%), Positives = 41/69 (59%) Frame = +3 Query: 285 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 464 ++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120 Query: 465 FNTPAMYVA 491 F ++Y+A Sbjct: 121 FGFSSLYIA 129 Score = 32.7 bits (71), Expect = 0.26 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 201 +V+DNG G+ KAG G+ P V P+ + +P Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35 >At3g12380.1 68416.m01543 actin/actin-like family protein similar to SP|P53946 Actin-like protein ARP5 {Saccharomyces cerevisiae}; contains Pfam profile PF00022: Actin Length = 724 Score = 48.8 bits (111), Expect = 4e-06 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = +3 Query: 294 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 470 P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+ Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144 Query: 471 TPAMYVAIQAVLS 509 PA+ + A S Sbjct: 145 VPAVAFGVDAAFS 157 Score = 42.7 bits (96), Expect = 2e-04 Identities = 17/34 (50%), Positives = 25/34 (73%) Frame = +1 Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 210 +V+DNG+ + G+AG+ PR VF +IV RPRH+ Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55 >At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase family protein similar to laccase [Pinus taeda][GI:13661201], lac110 laccase, Populus trichocarpa, EMBL:PTY13773 Length = 584 Score = 33.9 bits (74), Expect = 0.11 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = -1 Query: 230 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 93 P P I P RGL +G T+ +SSPA+P + +P +ST + TS+ Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332 >At1g15780.1 68414.m01893 expressed protein Length = 1335 Score = 33.1 bits (72), Expect = 0.20 Identities = 17/49 (34%), Positives = 26/49 (53%) Frame = +2 Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYQGYRTPPRHPASGLSPVATSKTTS 655 L ASG+ TG +L + V +YQ RT P P+S L A +++ + Sbjct: 541 LQASGQVTGSLLPPQNVVDQQRQLYQSQRTLPEMPSSSLDSTAQTESAN 589 >At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (IRX3) identical to gi:5230423 Length = 1026 Score = 31.5 bits (68), Expect = 0.60 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 3/39 (7%) Frame = +2 Query: 407 GSPQPQGQQREDDPDHV---RNIQHARHVRRHPSRALLY 514 GSP+ +G + E+D D + NI+H + +H + A+LY Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLY 129 >At5g53320.1 68418.m06627 leucine-rich repeat transmembrane protein kinase, putative Length = 601 Score = 28.7 bits (61), Expect = 4.2 Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 4/89 (4%) Frame = -2 Query: 646 LGGRDRAKSRRRMAWGSAVSLVDGHGVGDTVAGVQHDTGG--TTGRVQESTAWMATYMAG 473 L G+ + R+R+ W + +++V +G VA + +GG G ++ S ++ G Sbjct: 392 LHGQKGLRDRKRLEWETRLNMV--YGTARGVAHIHSQSGGKLVHGNIKSSNIFLNGKGYG 449 Query: 472 VLNVSNMIWVIFSL--LALGLRGASVSRT 392 ++ + M ++ SL A+G R ++ T Sbjct: 450 CISGTGMATLMHSLPRHAVGYRAPEITDT 478 >At2g32300.1 68415.m03949 uclacyanin I identical to uclacyanin I GI:3399767 from [Arabidopsis thaliana]; contains Pfam profile PF02298: Plastocyanin-like domain; identical to cDNA uclacyanin I GI:3399766 Length = 261 Score = 28.7 bits (61), Expect = 4.2 Identities = 17/34 (50%), Positives = 22/34 (64%) Frame = +2 Query: 599 PPRHPASGLSPVATSKTTSLKILTGAPATSFTTT 700 PP PA LSP AT+ TSL + G+P +S +TT Sbjct: 180 PPLSPA--LSP-ATAAGTSLPLFPGSPGSSSSTT 210 >At1g58370.1 68414.m06640 glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein similar to (1,4)-beta-xylan endohydrolase GI:5306060 from [Triticum aestivum] ; contains Pfam profiles PF00331: Glycosyl hydrolase family 10, PF02018: Carbohydrate binding domain Length = 917 Score = 28.7 bits (61), Expect = 4.2 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = +2 Query: 425 GQQREDDPDHVRNIQHARHVRRHPSRALLYASGRTTGIVL 544 G Q E + D I + + ++PS+AL+Y G ++GI L Sbjct: 478 GGQVEINDDRWHEIGGSFRIEKNPSKALVYVQGPSSGIDL 517 >At1g20640.2 68414.m02584 RWP-RK domain-containing protein similar to nodule inception protein GI:6448579 from (Lotus japonicus); contains Pfam profile: PF02042 RWP-RK domain Length = 844 Score = 28.7 bits (61), Expect = 4.2 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Frame = +2 Query: 446 PDHVRNIQHARHVRRHPSRALLYASGRTTGI--VLDSGDGVSHTVPIYQGYRTPPRHPAS 619 P ++ I ++R PSR + I V+DS GVS +PI Y P + Sbjct: 583 PTTLKRICRQHGIQRWPSRKIKKVGHSLQKIQRVIDSVQGVSGPLPIGSFYANFPNLVSQ 642 Query: 620 GLSPVATSKTT 652 P +KTT Sbjct: 643 SQEPSQQAKTT 653 >At1g20640.1 68414.m02583 RWP-RK domain-containing protein similar to nodule inception protein GI:6448579 from (Lotus japonicus); contains Pfam profile: PF02042 RWP-RK domain Length = 844 Score = 28.7 bits (61), Expect = 4.2 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Frame = +2 Query: 446 PDHVRNIQHARHVRRHPSRALLYASGRTTGI--VLDSGDGVSHTVPIYQGYRTPPRHPAS 619 P ++ I ++R PSR + I V+DS GVS +PI Y P + Sbjct: 583 PTTLKRICRQHGIQRWPSRKIKKVGHSLQKIQRVIDSVQGVSGPLPIGSFYANFPNLVSQ 642 Query: 620 GLSPVATSKTT 652 P +KTT Sbjct: 643 SQEPSQQAKTT 653 >At1g16690.2 68414.m01999 transcription factor-related similar to enhancer of polycomb (GI:11907923)[Homo sapiens] Length = 439 Score = 28.7 bits (61), Expect = 4.2 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +3 Query: 279 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 440 L++KY + H I + W + +IW L+ P PV T P N REK Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227 >At1g16690.1 68414.m01998 transcription factor-related similar to enhancer of polycomb (GI:11907923)[Homo sapiens] Length = 439 Score = 28.7 bits (61), Expect = 4.2 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +3 Query: 279 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 440 L++KY + H I + W + +IW L+ P PV T P N REK Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227 >At5g06050.1 68418.m00670 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase Length = 682 Score = 28.3 bits (60), Expect = 5.6 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +2 Query: 545 DSGDGVSHTVPIYQGYRTPPRHPAS 619 + G G++ TVPI QGYR+P P S Sbjct: 187 NDGMGLNCTVPIPQGYRSPIPWPRS 211 >At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit, putative similar to gi:2827141 cellulose synthase catalytic subunit, Arabidopsis thaliana (Ath-A) Length = 1088 Score = 28.3 bits (60), Expect = 5.6 Identities = 23/78 (29%), Positives = 31/78 (39%) Frame = +2 Query: 368 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALLYASGRTTGIVLD 547 AC GT GSP+ +G + +DD D + + + H + A LY TG Sbjct: 80 ACPQCGTRYKRIKGSPRVEGDEEDDDIDDLEHEFYGMD-PEHVTEAALYYMRLNTG---R 135 Query: 548 SGDGVSHTVPIYQGYRTP 601 D VSH G P Sbjct: 136 GTDEVSHLYSASPGSEVP 153 >At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2 Length = 1201 Score = 27.9 bits (59), Expect = 7.4 Identities = 15/48 (31%), Positives = 21/48 (43%) Frame = +2 Query: 485 RRHPSRALLYASGRTTGIVLDSGDGVSHTVPIYQGYRTPPRHPASGLS 628 +R + L A+GR + D GD S PIY + P R + S Sbjct: 443 KREAFKNQLLAAGRGLPVADDVGDATSSKRPIYANKKKPSRQKGNDTS 490 >At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family protein weak similarity to SP|Q00765 Polyposis locus protein 1 (TB2 protein) {Homo sapiens}; contains Pfam profile PF03134: TB2/DP1, HVA22 family Length = 315 Score = 27.9 bits (59), Expect = 7.4 Identities = 19/65 (29%), Positives = 26/65 (40%) Frame = +3 Query: 390 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPT 569 P L+T+ P++PK Q +T A Q L+ P PP P P Sbjct: 191 PQLVTKEPISPKPLSSPRKQQQLQTETKEAKASVSQTKLTTLTPPGPP-----PPPPPPP 245 Query: 570 PCPST 584 P P+T Sbjct: 246 PSPTT 250 >At5g06610.1 68418.m00747 expressed protein contains Pfam profile PF04788: Protein of unknown function (DUF620) Length = 368 Score = 27.5 bits (58), Expect = 9.8 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = -1 Query: 206 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 84 WR P + + A+GA P + AL +PL+ ++ +S+ + Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207 >At2g47500.1 68415.m05929 kinesin motor protein-related Length = 974 Score = 27.5 bits (58), Expect = 9.8 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -2 Query: 259 ASLLHKSPSVPYRPSR 212 ASL HK+P VPYR S+ Sbjct: 656 ASLAHKNPHVPYRNSK 671 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,981,745 Number of Sequences: 28952 Number of extensions: 401865 Number of successful extensions: 1358 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 1212 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1326 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1614253080 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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