Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1261
         (737 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7P6Z5 Cluster: Chromosome chr9 scaffold_7, whole genom...    36   1.4  
UniRef50_A5GL67 Cluster: Predicted protease with the C-terminal ...    33   5.5  
UniRef50_Q28IC0 Cluster: Novel protein; n=2; Xenopus tropicalis|...    33   9.7  
UniRef50_A2Z5J6 Cluster: Putative uncharacterized protein; n=8; ...    33   9.7  

>UniRef50_A7P6Z5 Cluster: Chromosome chr9 scaffold_7, whole genome
           shotgun sequence; n=7; Vitis vinifera|Rep: Chromosome
           chr9 scaffold_7, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 882

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = -2

Query: 556 KYMFLGTAMYTEDSSGSEVPCPKFELCVNTCWRVFEQNHRSTSL--DISAITKLDYVDSC 383
           KY+     MY    S +++P  K  L V+  W     N+ S ++  +I  + K DY+D C
Sbjct: 105 KYLIRAFFMYGNYDSKNQLPVFKLHLGVDE-WDTINFNNSSQTVRKEIIHVPKTDYIDVC 163

Query: 382 CYRSGSG 362
              +GSG
Sbjct: 164 LVNNGSG 170


>UniRef50_A5GL67 Cluster: Predicted protease with the C-terminal PDZ
           domain; n=12; Cyanobacteria|Rep: Predicted protease with
           the C-terminal PDZ domain - Synechococcus sp. (strain
           WH7803)
          Length = 568

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +2

Query: 419 DIERCATVVLFKNTPARVHTQFEFWARNFASAAVFSVHCGSKKHVL 556
           D  R A V L+K TPA  H+Q  ++    A A    VH    +H L
Sbjct: 347 DSSREAWVRLYKQTPANAHSQISYYRLGTALAFCLDVHLRQSQHSL 392


>UniRef50_Q28IC0 Cluster: Novel protein; n=2; Xenopus
           tropicalis|Rep: Novel protein - Xenopus tropicalis
           (Western clawed frog) (Silurana tropicalis)
          Length = 359

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = -2

Query: 514 SGSEVPCPKFELCVNTCWRVFEQNHRSTSLDISAITKLDYVDSCCYRSGSGLFL 353
           S  E+PC ++ + + T   V E+  RS +  +S  T   + +SC + +G+   L
Sbjct: 218 SDGEIPCLQYSVLLQTEESVQEEYRRSRAQPVSVTTHAQHHESCLHSAGTNFSL 271


>UniRef50_A2Z5J6 Cluster: Putative uncharacterized protein; n=8;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 419

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = -2

Query: 547 FLGTAMYTEDSSGSEVPCP-KFELCVNTCWRVFE 449
           +LG A+ T+DS G  V C  +FE+ + TC+ ++E
Sbjct: 182 YLGAALRTDDSDGGGVVCSFEFEIILVTCYNMWE 215


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,976,414
Number of Sequences: 1657284
Number of extensions: 15031324
Number of successful extensions: 35914
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35907
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)