Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1258
         (640 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O66504 Cluster: Uncharacterized protein aq_097; n=1; Aq...    33   4.4  
UniRef50_Q23WT2 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_UPI0000E483D3 Cluster: PREDICTED: similar to UDP-Glucur...    33   7.7  

>UniRef50_O66504 Cluster: Uncharacterized protein aq_097; n=1;
           Aquifex aeolicus|Rep: Uncharacterized protein aq_097 -
           Aquifex aeolicus
          Length = 407

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = +1

Query: 232 HTPPKRLDDFDEIFCAYPVSMRIGQHLFFIPL 327
           H PPK+LD+ + IF A  VS+ +G  L F PL
Sbjct: 272 HNPPKKLDETEIIFLASAVSLVLGYLLRFGPL 303


>UniRef50_Q23WT2 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1261

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 20/61 (32%), Positives = 28/61 (45%)
 Frame = +3

Query: 399 YDTTYKNTYNPQFSPFYDQPLFFNSHFSNLIIFPLRSKLINRHLISYPRQMSTGVTSDPV 578
           Y T   NT N  F+P+  +   FN  +S +I+  L SK   +    +P   S  V  D V
Sbjct: 809 YSTDKCNTQNTIFNPYLKKAYLFN--YSKVIVVDLYSKTDTQLAYGHPTTNSVTVIQDSV 866

Query: 579 N 581
           N
Sbjct: 867 N 867


>UniRef50_UPI0000E483D3 Cluster: PREDICTED: similar to
           UDP-Glucuronosyltransferase UGT2B33, partial; n=1;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           UDP-Glucuronosyltransferase UGT2B33, partial -
           Strongylocentrotus purpuratus
          Length = 420

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = +1

Query: 208 FSCHSFRCHTPPKRLDDFDEIFCAYPVSMRI----GQHLFFIPLNVRGSPTL 351
           F+  S+  H  P+ L+ F E+F  YP    +    G+H F +P NV+  P L
Sbjct: 209 FTLGSYVTHIKPEFLEPFAEVFQRYPQQKILWQLAGEHKFKLPPNVKTMPWL 260


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,222,273
Number of Sequences: 1657284
Number of extensions: 10455992
Number of successful extensions: 22298
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22268
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)